prot_E_fasciculatus_S2_contig7027.15191.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig7027.15191.1
Unique Name	prot_E_fasciculatus_S2_contig7027.15191.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	151

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig7027.15191.1 vs. uniprot
Match: A0A6H5L2Q9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Q9_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 4.530e-59
Identity = 116/146 (79.45%), Postives = 123/146 (84.25%), Query Frame = 0

Query:    1 LAQLAVVGICVGTAAAGSTASASSVPRRSPATGARSPLAFTSSQPLRPSLRFADHARDVRGGRRQAGGRRAVAASAAASRAGATSMFPWRRGGEGGGEARGRGGRRGSRIEASPAFGPDDTAGPRLRAAGSPLKKAFSWGRGRRSR 146
            L QLAV+GIC+GTA AGST ++SS PRRSPAT ARSPLAFT S PLRPSL FAD  RDVRGGRRQAGGRRAV+ASAA SR GATSMF WRR G G G++RGRGGRR SRIEASPAFG   TAGPRLR AGSPLKKAFSW R RRSR
Sbjct:   22 LTQLAVMGICMGTAVAGSTTTSSSAPRRSPATDARSPLAFTLSPPLRPSLLFADDTRDVRGGRRQAGGRRAVSASAA-SRGGATSMFSWRREGGGRGDSRGRGGRRSSRIEASPAFGTGITAGPRLRPAGSPLKKAFSWRRRRRSR 166

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig7027.15191.1 vs. uniprot
Match: D7G110_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G110_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 5.650e-32
Identity = 90/148 (60.81%), Postives = 95/148 (64.19%), Query Frame = 0

Query:    1 LAQLAVVGICVGTAAAGSTASASSVPRRSPATGARSPLAFTSSQPLRPSLRFADHARDVRGGRRQAGGRRAVAASAAASRAGATSMFPWRRGGEGGGEARGRGGRRGSRIEASPAFGPDDTAGPRLRAAGSPLKKAFSWGRGRRSRGD 148
            L QLAVVGICVGTAAAGST S++SVPRRS A  ARSPLAF     LRPSLRFAD  RDVRGGRRQ                                E+RG GGRR SRIEA PAFG    AGPRLRA GSPLKKAFSWGRG +SRG+
Sbjct:   22 LTQLAVVGICVGTAAAGSTTSSASVPRRSSAMDARSPLAFALPPSLRPSLRFADDTRDVRGGRRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ESRGMGGRRSSRIEAYPAFGTGTAAGPRLRAVGSPLKKAFSWGRGLQSRGE 168

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig7027.15191.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig7027.15191.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L2Q9_9PHAE	4.530e-59	79.45	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G110_ECTSI	5.650e-32	60.81	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..15
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..150
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..16 score: 0.548

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig7027	contig	E_fasciculatus_S2_contig7027:5771..7956 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig7027.15191.1	mRNA_E_fasciculatus_S2_contig7027.15191.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig7027 391..7956 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig7027.15191.1 ID=prot_E_fasciculatus_S2_contig7027.15191.1|Name=mRNA_E_fasciculatus_S2_contig7027.15191.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=151bp
LAQLAVVGICVGTAAAGSTASASSVPRRSPATGARSPLAFTSSQPLRPSL
RFADHARDVRGGRRQAGGRRAVAASAAASRAGATSMFPWRRGGEGGGEAR
GRGGRRGSRIEASPAFGPDDTAGPRLRAAGSPLKKAFSWGRGRRSRGDHQ
*