prot_E_fasciculatus_S2_contig7021.15184.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7021.15184.1
Unique Nameprot_E_fasciculatus_S2_contig7021.15184.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length420
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7021.15184.1 vs. uniprot
Match: A0A6H5KHY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHY3_9PHAE)

HSP 1 Score: 598 bits (1543), Expect = 4.420e-210
Identity = 356/463 (76.89%), Postives = 367/463 (79.27%), Query Frame = 0
Query:    2 GGGGGVWRSFLGSCSMLLLLRPPVLLRSTLRWLSGRRRGLAR-------------------------------------------ATGRGG--RGRSPYKHVDLFVSGGFSGALRGQREGGRGSASGHSRRQRRHRRPCASGDEELSRHDVEEALARVNRVLVVQLEDLVRPYGFPRAIAPDRTPTLAAAVAGARGVLPSCLRRVIAASNHLALTEFPDKVASAISAGRYANEELRVTASSIAAAAVAEEPGMGRGRVAELGACMADLIASDFEALELAGLSPGTQQAVFRSLDVGMALSDVAAAWALVRQDAVCWESCPRVGLDHSAGRLISLGDGRRAEETGENSSGRRGRSSSCSSGSVEGEASRAGGDDGDIFEDGGAPLCRTRGKKGDARGGKGEQHQRXXXXXXKTVVQRTGDDSCGSCVGGFLATGFADGFERLEDQEAGYGAFAGFIVRVLDQMP 419
            GGG GVWRSFLGSCS+LLLLR      STLRWL GRRRGLAR                                           A GRGG  RG S YKH+D+FVSGGFSGA RGQREGG  SA GHS R++RHRRP A GDEELSR DVEEALARVNRVLVVQLEDLVRPYGFP AIAPDRTPTLAAAVAGARGVLPSCLRR IAASNHLALTEFPDKVASAI AGRYANEELRVTASSIAAAAVAEEPGMGRGRVAELGACMADLIASDFEALE+AGLSPGTQQAVFRSLDVGMALSDVAAAWALVRQDAVCWESCP VGL HS GRLISLGDG R EET ++ SGRRGR +S SSGSVEG A R  GDDGDI ED G    RTRGKKGD+RGGK E    XXXXXXK +V RTGD  CGSCVGGFLATGFADGFERLEDQEAGYGAFA FIVRVLDQMP
Sbjct:  108 GGGDGVWRSFLGSCSVLLLLR------STLRWLFGRRRGLARTKLREVFNATRKDNQRVLVIALKPPRDLVEVLLESGRASWWGRAMGRGGGRRGCSRYKHIDMFVSGGFSGAFRGQREGGECSAPGHSPREQRHRRPSAGGDEELSRDDVEEALARVNRVLVVQLEDLVRPYGFPTAIAPDRTPTLAAAVAGARGVLPSCLRREIAASNHLALTEFPDKVASAIEAGRYANEELRVTASSIAAAAVAEEPGMGRGRVAELGACMADLIASDFEALEMAGLSPGTQQAVFRSLDVGMALSDVAAAWALVRQDAVCWESCPGVGLGHSGGRLISLGDGARREETEDSRSGRRGRRNS-SSGSVEGPAGRPRGDDGDISEDRGDSRRRTRGKKGDSRGGKREXXX-XXXXXXKILVHRTGDGMCGSCVGGFLATGFADGFERLEDQEAGYGAFAVFIVRVLDQMP 562          
BLAST of mRNA_E_fasciculatus_S2_contig7021.15184.1 vs. uniprot
Match: D8LJK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK4_ECTSI)

HSP 1 Score: 521 bits (1342), Expect = 3.020e-178
Identity = 314/414 (75.85%), Postives = 320/414 (77.29%), Query Frame = 0
Query:    6 GVWRSFLGSCSMLLLLRPPVLLRSTLRWLSGRRRGLARATGRGGRGRSPYKHVDLFVSGGFSGALRGQREGGRGSASGHSRRQRRHRRPCASGDEELSRHDVEEALARVNRVLVVQLEDLVRPYGFPRAIAPDRTPTLAAAVAGARGVLPSCLRRVIAASNHLALTEFPDKVASAISAGRYANEELRVTASSIAAAAVAEEPGMGRGRVAELGACMADLIASDFEALELAGLSPGTQQAVFRSLDVGMALSDVAAAWALVRQDAVCWESCPRVGLDHSAGRLISLGDGRRAEETGENSSGRRGRSSSCSSGSVEGEASRAGGDDGDIFEDGGAPLCRTRGKKGDARGGKGEQHQRXXXXXXKTVVQRTGDDSCGSCVGGFLATGFADGFERLEDQEAGYGAFAGFIVRVLDQMP 419
            GVWRSFLGSCSMLLLL     LRSTLRWLSGRRRGLAR                            GQ EG     SGHS R++ HRRP A GDEELSR DVEEALARVNRVLVVQLEDLVRPYGFPRAIAPDRTPTLAAAVAGARGVLPSCLRR IAASNHLALTEFPDKVASAI AGRYANEELRVTASSIAAAAVAEEPGMGRGRVAELGACMADLIASDFEALE+AGLSPGTQQAVFRSLDVGMALSDVAAAWALVRQDAVCWESCPRVGLDHSAGRLISLGDG R EETGENSSGRR         S+EG A RA     DI ED                         XXXXXXK VV+RTGD  CGSCVGGFLATGFADGFE+LEDQEAGYGAFA FIVRVLDQMP
Sbjct:  278 GVWRSFLGSCSMLLLL-----LRSTLRWLSGRRRGLAR----------------------------GQGEGXXXXXSGHSLRRQWHRRPSAGGDEELSREDVEEALARVNRVLVVQLEDLVRPYGFPRAIAPDRTPTLAAAVAGARGVLPSCLRREIAASNHLALTEFPDKVASAIKAGRYANEELRVTASSIAAAAVAEEPGMGRGRVAELGACMADLIASDFEALEMAGLSPGTQQAVFRSLDVGMALSDVAAAWALVRQDAVCWESCPRVGLDHSAGRLISLGDGARGEETGENSSGRRXXXXXXXD-SIEGSAGRAXXXXXDIVEDXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXKIVVRRTGDGLCGSCVGGFLATGFADGFEKLEDQEAGYGAFAVFIVRVLDQMP 656          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7021.15184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KHY3_9PHAE4.420e-21076.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJK4_ECTSI3.020e-17875.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018260Ribosomal protein L22/L17, conserved sitePROSITEPS00464RIBOSOMAL_L22coord: 38..62
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.669

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7021contigE_fasciculatus_S2_contig7021:81..5111 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7021.15184.1mRNA_E_fasciculatus_S2_contig7021.15184.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7021 81..5111 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7021.15184.1 ID=prot_E_fasciculatus_S2_contig7021.15184.1|Name=mRNA_E_fasciculatus_S2_contig7021.15184.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=420bp
GGGGGGVWRSFLGSCSMLLLLRPPVLLRSTLRWLSGRRRGLARATGRGGR
GRSPYKHVDLFVSGGFSGALRGQREGGRGSASGHSRRQRRHRRPCASGDE
ELSRHDVEEALARVNRVLVVQLEDLVRPYGFPRAIAPDRTPTLAAAVAGA
RGVLPSCLRRVIAASNHLALTEFPDKVASAISAGRYANEELRVTASSIAA
AAVAEEPGMGRGRVAELGACMADLIASDFEALELAGLSPGTQQAVFRSLD
VGMALSDVAAAWALVRQDAVCWESCPRVGLDHSAGRLISLGDGRRAEETG
ENSSGRRGRSSSCSSGSVEGEASRAGGDDGDIFEDGGAPLCRTRGKKGDA
RGGKGEQHQRRREEEEKTVVQRTGDDSCGSCVGGFLATGFADGFERLEDQ
EAGYGAFAGFIVRVLDQMP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018260Ribosomal_L22/L17_CS