mRNA_E_fasciculatus_S2_contig702.15181.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig702.15181.1 vs.
Match: Histidine--tRNA (ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G621_ECTSI) HSP 1 Score: 961 bits (2484), Expect = 0.000e+0 Identity = 529/579 (91.36%), Postives = 536/579 (92.57%), Query Frame = 3
Query: 87 MRLQAQMLLSVASGSLGPAATVVRAFVPAASTAVRVHSAAASTRGAATAXXXXSSTTRLRAFSAGAAGPSVDRAAISSWGRASSSRRPVACSAESGGKAXXXXXXXXXXXXXXXXXXAAVLQDAEKRGGAARGGSPAAVEKLDLKPPKGTRDVFPEDMRLRNWLFGHWRGVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVSGVSAEAELLGAMVTFFERVGLRAEDVGIRVNSRGVLTEVLHSLGVPGDKHTATCVLVDKLDKVPLEAVAGDLAELGLEETSVKRLLEVMELRDMEGVEAFLGKESPAAQELRKLFALAESYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGKLRAIAGGGRYDALLESFGGEALPAAGFGFGDAVIVELLSDRGLLPKETGPGVTAVVFGWDDELQGAATEVAASLRREGVSVDLVLQPRKTKANFKHATRVGATYVVMVAPSEWKAGKVSVKDLRTSDQKELPVGEVASHILAGDVAISKE*RTD 1823
MRLQAQMLLSVASGSLGPAATVVRAFVP+ASTAVRVHSA XXXX STTRLRAFSAG GPSVDRAAISSWGR SSSRR +ACSAESGGKA XXXXXXXXXXXXX AAVEKLDLKPPKGTRDVFPEDMRLRNWLFGHWRGVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVSGV+AEAELLGAMVTFFERVGLRAEDVGIRVNSRGVLTEVLHSLGVPGDKHTATCVLVDKLDK+PLEAVAGDLAELGLEETSVKRLLEVMELRDM GVEAFLGKESPAA+ELRKLFALAESYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGKLRAIAGGGRYDALLESFGGEALPAAGFGFGDAVIVELLSDRGLLPKE GPG TAVVFGWDDELQGAATEVAASLRREG+SVDLVLQPRKTKANFKHATRVGATYVVMVAPSEW+AGKVSVKDLRTSDQKELPVGEVASHILAGDVAISKE RTD
Sbjct: 1 MRLQAQMLLSVASGSLGPAATVVRAFVPSASTAVRVHSAXXXXXXXXX-XXXXXSTTRLRAFSAGEPGPSVDRAAISSWGRGSSSRRSIACSAESGGKAGALGAXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXAAVEKLDLKPPKGTRDVFPEDMRLRNWLFGHWRGVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVSGVAAEAELLGAMVTFFERVGLRAEDVGIRVNSRGVLTEVLHSLGVPGDKHTATCVLVDKLDKMPLEAVAGDLAELGLEETSVKRLLEVMELRDMGGVEAFLGKESPAAEELRKLFALAESYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGKLRAIAGGGRYDALLESFGGEALPAAGFGFGDAVIVELLSDRGLLPKEAGPGATAVVFGWDDELQGAATEVAASLRREGISVDLVLQPRKTKANFKHATRVGATYVVMVAPSEWEAGKVSVKDLRTSDQKELPVGEVASHILAGDVAISKEKRTD 576
BLAST of mRNA_E_fasciculatus_S2_contig702.15181.1 vs.
Match: Histidine--tRNA (ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4P1_9STRA) HSP 1 Score: 582 bits (1500), Expect = 4.570e-200 Identity = 287/424 (67.69%), Postives = 340/424 (80.19%), Query Frame = 3
Query: 510 LDLKPPKGTRDVFPEDMRLRNWLFGHWRGVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVSGVSAEAELLGAMVTFFERVGLRAEDVGIRVNSRGVLTEVLHSLGVPGDKHTATCVLVDKLDKVPLEAVAGDLAELGLEETSVKRLLEVMELRDMEGVEAFLGKESPAAQELRKLFALAESYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGKLRAIAGGGRYDALLESFGGEALPAAGFGFGDAVIVELLSDRGLLPKETGPGVTAVVFGWDDELQGAATEVAASLRREGVSVDLVLQPRKTKANFKHATRVGATYVVMVAPSEWKAGKVSVKDLRTSDQKELPVGEVASHI 1781
+D P KGTRD++PEDMRLR WLFGHWR VA +GFEEYDAPVLESE+LY RKSGEEVTQQLY FEDKG RRV+LRPEMTPSLARM+MA+R +TLPVKWFS+PQCWRYERMTRGRRREHYQWNMDIWGV GV AEAELL A+V+FF +G+ + DVG++VNSR L E++ SLGVP KH ATCVLVDKL+KVPL+A+ D+A LGL + +V +LL VME + ++ +EA +G +S A +ELR+LF LAE+YG +DWLV D SVVRGLAYYTG VFE FDR G LRAI GGGRYD LLESFGGEALPA GFGFGDAVIVELL DR LLP T V A+V + ELQGAAT +AA+LR++G SVDLV++ RK K FKHA R GA +V +VAP EW KV+VKD+ T DQ + ++A++I
Sbjct: 1 MDANPVKGTRDMYPEDMRLRTWLFGHWRKVAEQYGFEEYDAPVLESEALYVRKSGEEVTQQLYNFEDKGERRVALRPEMTPSLARMIMARRNGVTLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVQGVEAEAELLAAVVSFFTNIGITSADVGMKVNSRAALGEIMTSLGVPEAKHAATCVLVDKLEKVPLDALRSDMAALGLTDETVTKLLAVMESKSIDALEAAVGADSAAVRELRRLFELAEAYGYADWLVFDASVVRGLAYYTGIVFEGFDRSGALRAICGGGRYDKLLESFGGEALPACGFGFGDAVIVELLKDRNLLPDTTRGTVEALVSAFSPELQGAATSIAAALRQQGRSVDLVIESRKPKWVFKHADRRGARFVCLVAPQEWAERKVNVKDMVTGDQLAVQRDDLATYI 424
BLAST of mRNA_E_fasciculatus_S2_contig702.15181.1 vs.
Match: Histidine--tRNA (ligase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3ZLG2_9STRA) HSP 1 Score: 560 bits (1442), Expect = 5.740e-190 Identity = 275/417 (65.95%), Postives = 330/417 (79.14%), Query Frame = 3
Query: 510 LDLKPPKGTRDVFPEDMRLRNWLFGHWRGVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVSGVSAEAELLGAMVTFFERVGLRAEDVGIRVNSRGVLTEVLHSLGVPGDKHTATCVLVDKLDKVPLEAVAGDLAELGLEETSVKRLLEVMELRDMEGVEAFLGKESPAAQELRKLFALAESYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGKLRAIAGGGRYDALLESFGGEALPAAGFGFGDAVIVELLSDRGLLPKETGPGVTAVVFGWDDELQGAATEVAASLRREGVSVDLVLQPRKTKANFKHATRVGATYVVMVAPSEWKAGKVSVKDLRTSDQKELPV 1760
LD PPKGTRD +P DMRL++WLF WR VA+++GF EYDAPVLESESLYTRK+GEEVTQQLY FEDKGGR V+LRPEMTPSLARMVMAK+ L LP+KW+SIPQCWRYERMTRGRRREHYQWNMDIWGV G+ AEAELL AMV FF+ VGL A+DVGI+VNSR V+ EVL LGVP +K ATCVLVDKL+KVPL+A+ G+L ELGLE + +++L EV+ +E + A L +S A QEL KLF L +YGI DW++ D SVVRGLAYYTG VFEAFDR+G LRA+AGGGRYD LLE+FGGE PAAGFGFGDAVIVELL +R +LP G G +VVF ++L G A EVA+ LR G +VDL+L+ +K K FKHA+R A + V+VA +E++ G+VSVKDL +QK + +
Sbjct: 84 LDTNPPKGTRDFYPADMRLQSWLFNQWRQVAATYGFSEYDAPVLESESLYTRKAGEEVTQQLYNFEDKGGRNVALRPEMTPSLARMVMAKKGGLPLPLKWYSIPQCWRYERMTRGRRREHYQWNMDIWGVDGIEAEAELLSAMVMFFKNVGLTADDVGIKVNSRNVIGEVLTELGVPEEKFAATCVLVDKLEKVPLDAIQGELEELGLERSMIEKLTEVLTNTSIESISAVLPDDSKAVQELTKLFDLCNAYGIGDWIMFDASVVRGLAYYTGVVFEAFDRKGVLRAVAGGGRYDKLLETFGGEPTPAAGFGFGDAVIVELLKERNVLPSFEGSGYDSVVFAMSEDLYGVAIEVASKLRAAGQTVDLILEKKKPKWVFKHASRNDAKFCVIVAGNEYENGEVSVKDLSAGEQKAVKI 500
BLAST of mRNA_E_fasciculatus_S2_contig702.15181.1 vs.
Match: Histidine--tRNA (ligase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U324_9STRA) HSP 1 Score: 559 bits (1441), Expect = 3.020e-189 Identity = 284/435 (65.29%), Postives = 333/435 (76.55%), Query Frame = 3
Query: 507 KLDLKPPKGTRDVFPEDMRLRNWLFGHWRGVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVSGVSAEAELLGAMVTFFERVGLRAEDVGIRVNSRGVLTEVLHSLGVPGDKHTATCVLVDKLDKVPLEAVAGDLAELGLEETSVKRLLEVMELRDMEGVEAFLGKESPAAQELRKLFALAESYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGKLRAIAGGGRYDALLESFGGEALPAAGFGFGDAVIVELLSDRGLLPKETGPGVTAVVFGWDDELQGAATEVAASLRREGVSVDLVLQPRKTKANFKHATRVGATYVVMVAPSEWKAGKVSVKDLRTSDQKELPVGEVASHILAGDVAISKE 1811
KLDL PP+GTRD +PEDMR R+WLF WR VA FEEYDAPVLESE L+ RK+GEEVT+QLY FEDKGGRRV+LRPEMTPSLARMVMAKR L +PVKWFS PQCWRYERMTRGRRREHYQWNMD+WGVSGV AEAELL A+ TFF+RVGL AEDVGI+V+SRGVL EVL +L VP K +ATCVLVDKL+K+PLEA+ GDL LGLEE+ V+RLL+V++ RD +E +G +S A +LR+LF A +Y +WLVLD SVVRGLAYYTG VFEAFDR+G+LRAI GGGRYD LLE+FGGEALPA GFGFGDAVI+ELL +GL+P G+ A+VF + LQG A A SLR G++VDL L+ RKTK KHA R+GATYVV+V P E V VK++ T Q + + + S I A S E
Sbjct: 110 KLDLNPPRGTRDFYPEDMRTRSWLFELWRQVARDHAFEEYDAPVLESEDLFVRKAGEEVTEQLYNFEDKGGRRVALRPEMTPSLARMVMAKRNGLVMPVKWFSFPQCWRYERMTRGRRREHYQWNMDVWGVSGVEAEAELLSAITTFFKRVGLTAEDVGIKVSSRGVLAEVLAALDVPDAKFSATCVLVDKLEKLPLEAIQGDLTALGLEESVVRRLLDVVQSRDFPSLETAIGAKSTALAQLRQLFEYARAYNFEEWLVLDASVVRGLAYYTGIVFEAFDRKGELRAICGGGRYDKLLETFGGEALPAVGFGFGDAVIMELLESKGLVPS-LSLGLDALVFAMEAGLQGIAIRAATSLRAAGLTVDLQLEARKTKWALKHADRLGATYVVIVGPEEVAGCNVRVKEMATGQQHVVAIANLESWISATFTTTSPE 543
BLAST of mRNA_E_fasciculatus_S2_contig702.15181.1 vs.
Match: Histidine--tRNA (ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1W7_THAPS) HSP 1 Score: 557 bits (1435), Expect = 5.120e-189 Identity = 278/422 (65.88%), Postives = 331/422 (78.44%), Query Frame = 3
Query: 510 LDLKPPKGTRDVFPEDMRLRNWLFGHWRGVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVSGVSAEAELLGAMVTFFERVGLRAEDVGIRVNSRGVLTEVLHSLGVPGDKHTATCVLVDKLDKVPLEAVAGDLAELGLEETSVKRLLEVMELRDMEGVEAFLGKESPAAQELRKLFALAESYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGKLRAIAGGGRYDALLESFGGEALPAAGFGFGDAVIVELLSDRGLLPKETGPGVTAVVFGWDDELQGAATEVAASLRREGVSVDLVLQPRKTKANFKHATRVGATYVVMVAPSEWKAGKVSVKDLRTSDQKELPVGEVAS 1775
LD PPKGTRD +P DMRLR WLF WR VAS +GF EYDAPVLESESLYTRK+GEEVTQQLY F DKG R V+LRPEMTPSLARMVMAK+ L LP+KWFSIPQCWRYERMTRGRRREHYQWNMDIWGV G+ AEAELL AMV FF+RVGL +EDVGI+VNSRGV+ EVL LGVP +K ATCVLVDKL+KVPL+A+ G+L ELGLE++++++L V+ +E + A L S A ++L +LF L E+YGI+DW++ D SVVRGLAYYTG VFEAFDR+G LRAIAGGGRYD LLE+FGGE PAAGFGFGDAVIVELL +R +LP G G VVF ++L G A +VA++LR+ G SVDL+L+ +K K FKHA+R A Y V+VA E+K G+VSVKDL +Q + + + S
Sbjct: 79 LDTNPPKGTRDFYPPDMRLRTWLFSQWRIVASLYGFSEYDAPVLESESLYTRKAGEEVTQQLYNFVDKGDRNVALRPEMTPSLARMVMAKKGGLPLPLKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVDGIEAEAELLSAMVMFFKRVGLTSEDVGIKVNSRGVIGEVLKELGVPEEKFAATCVLVDKLEKVPLDAIQGELEELGLEKSTIEKLTSVLTNTSIESISAVLPPGSDAVKQLSQLFKLCEAYGIADWILFDASVVRGLAYYTGIVFEAFDRKGVLRAIAGGGRYDKLLETFGGEPTPAAGFGFGDAVIVELLKERDVLPSFEGSGFDTVVFAMSEDLFGVAVQVASTLRQNGQSVDLILENKKPKWVFKHASRNEAKYCVIVAGDEYKNGEVSVKDLALGEQMSVKIDALDS 500
BLAST of mRNA_E_fasciculatus_S2_contig702.15181.1 vs.
Match: Histidine--tRNA (ligase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RP29_9STRA) HSP 1 Score: 555 bits (1429), Expect = 4.560e-188 Identity = 277/423 (65.48%), Postives = 329/423 (77.78%), Query Frame = 3
Query: 504 EKLDLKPPKGTRDVFPEDMRLRNWLFGHWRGVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVSGVSAEAELLGAMVTFFERVGLRAEDVGIRVNSRGVLTEVLHSLGVPGDKHTATCVLVDKLDKVPLEAVAGDLAELGLEETSVKRLLEVMELRDMEGVEAFLGKESPAAQELRKLFALAESYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGKLRAIAGGGRYDALLESFGGEALPAAGFGFGDAVIVELLSDRGLLPKETGPGVTAVVFGWDDELQGAATEVAASLRREGVSVDLVLQPRKTKANFKHATRVGATYVVMVAPSEWKAGKVSVKDLRTSDQKELPVGEVA 1772
++LD PPKGTRD +PEDMRLR WLF HWR VAS++GF EYDAPVLESE+LYTRK+GEEVTQQLY F DKG R V+LRPEMTPSLARMVMAK+ L LP+KW SIPQCWRYERMTRGRRREH+QWNMD+WGV GV AEAELL AMVTFFE VGL ++DVGI+VNSR V+TEVL LGVP DK ATCVLVDKL+KVPL+A+ DL ELGLE V++LLEV+ +E + + LG ES A ++L +LF L E+YGI DW++LD SVVRGLAYYTG VFEAFDR+G LRAIAGGGRYD LLE+FGG+ PAAGFGFGDAVIVELL +R +LP V VVF EL A VA+ LR+ G VD+VL+ +K K FKHA R+ A Y ++VAP E++ +VSVK+L +Q + + +A
Sbjct: 81 KQLDTNPPKGTRDFYPEDMRLRTWLFDHWRSVASTYGFSEYDAPVLESEALYTRKAGEEVTQQLYNFMDKGDRAVALRPEMTPSLARMVMAKKGGLNLPLKWHSIPQCWRYERMTRGRRREHFQWNMDVWGVQGVEAEAELLSAMVTFFENVGLTSDDVGIKVNSRLVITEVLTELGVPEDKFAATCVLVDKLEKVPLDAIQDDLTELGLERDVVEKLLEVLTNNSLESLSSVLGAESNAVKQLTELFDLCEAYGIQDWVLLDASVVRGLAYYTGIVFEAFDRKGVLRAIAGGGRYDKLLETFGGDPTPAAGFGFGDAVIVELLKERNVLPSFESSDVDTVVFAMRPELYSVAINVASKLRKAGQKVDVVLEKKKPKWVFKHADRICAKYCLIVAPDEYEKQEVSVKNLELGEQTTVKIDALA 503
BLAST of mRNA_E_fasciculatus_S2_contig702.15181.1 vs.
Match: Histidine--tRNA (ligase n=2 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K527_GUITC) HSP 1 Score: 552 bits (1422), Expect = 4.510e-187 Identity = 278/448 (62.05%), Postives = 335/448 (74.78%), Query Frame = 3
Query: 438 AAVLQDAEKRGGAARGGSPAAVEKLDLKPPKGTRDVFPEDMRLRNWLFGHWRGVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVSGVSAEAELLGAMVTFFERVGLRAEDVGIRVNSRGVLTEVLHSLGVPGDKHTATCVLVDKLDKVPLEAVAGDLAELGLEETSVKRLLEVMELRDMEGVEAFLGKESPAAQELRKLFALAESYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGKLRAIAGGGRYDALLESFGGEALPAAGFGFGDAVIVELLSDRGLLPKETGPGVTAVVFGWDDELQGAATEVAASLRREGVSVDLVLQPRKTKANFKHATRVGATYVVMVAPSEWKAGKVSVKDLRTSDQKELPVGEVASHI 1781
AAV Q EK S EKLDLKPPKGTRD +PEDMR+RNWLFGHW+ VA GFEEYDAPVLESE LY RK+GEEVTQQLY FEDKG RRVSLRPEMTPSLARMVMA+ KSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGV G+ AEAELL A+VTFF+RVG+ ++DVGI+VNSR VL+EVL ++GVP DK ATCVLVDKL+KV L+ + G++ ELGL + + +L+ + ++D++ +E LG S A +L++L AE+YG DWL+ D SVVRGLAYYTG VFE FDR+G+LRAI GGGRYD LL +FGGE LPA GFGFGDAVI ELL DR LLP V VVF + +A V+ +R + +S DLVL+ +K K FKHA R+GA+++V++ E G V VK+L +Q E+ V +V+ I
Sbjct: 61 AAVAQSKEK--------STGKKEKLDLKPPKGTRDFYPEDMRMRNWLFGHWKDVARLHGFEEYDAPVLESEELYIRKAGEEVTQQLYNFEDKGERRVSLRPEMTPSLARMVMARGKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVPGIEAEAELLSAIVTFFKRVGITSQDVGIKVNSRAVLSEVLTAMGVPADKFAATCVLVDKLEKVKLDDIRGEMQELGLTDEIITKLVATLSIKDLDALEQTLGNGSKALAQLKQLMEYAEAYGFRDWLIFDASVVRGLAYYTGVVFEGFDRKGELRAICGGGRYDELLATFGGEPLPAVGFGFGDAVIAELLKDRNLLPNFDNNKVDVVVFPLSPSVYASAAAVSGVVRSKSISSDLVLEDKKMKWAFKHAERLGASHLVIIGEDEIAKGIVQVKNLAKGEQVEVEVSKVSDFI 500
BLAST of mRNA_E_fasciculatus_S2_contig702.15181.1 vs.
Match: Histidine--tRNA (ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJR6_FISSO) HSP 1 Score: 549 bits (1414), Expect = 4.950e-186 Identity = 269/424 (63.44%), Postives = 334/424 (78.77%), Query Frame = 3
Query: 504 EKLDLKPPKGTRDVFPEDMRLRNWLFGHWRGVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVSGVSAEAELLGAMVTFFERVGLRAEDVGIRVNSRGVLTEVLHSLGVPGDKHTATCVLVDKLDKVPLEAVAGDLAELGLEETSVKRLLEVMELRDMEGVEAFLGKESPAAQELRKLFALAESYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGKLRAIAGGGRYDALLESFGGEALPAAGFGFGDAVIVELLSDRGLLPKETGPGVTAVVFGWDDELQGAATEVAASLRREGVSVDLVLQPRKTKANFKHATRVGATYVVMVAPSEWKAGKVSVKDLRTSDQKELPVGEVAS 1775
EKLD PPKGTRD +PEDMRLRNWLF WR A GF EYDAPVLESE+LYTRK+GEEVTQQLY F DKG R V+LRPEMTPSLARMVMAK+ +L LP KWFSIPQCWRYERMTRGRRREH+QWNMDIWGV+G AEAEL+ AMV FFE VGL +EDVGI+VNSR V+ EVL+ LG+P +K ATCVLVDKL+KVP++A+ G+L ELGL+ + V++LL V+ + +E + LG +S A +L K +L ++YGI DW++LD SVVRGLAYYTG VFEAFDR+G+LRAIAGGGRYD LLE+FGG+++PAAGFGFGDAVIVELL +R +LP G+ VVF +++L A + A +LR+ G SVDL+L+ +K+K FKHA R+GA Y ++V SE++ G+V+VKDL+ Q + + E+ S
Sbjct: 68 EKLDTNPPKGTRDFYPEDMRLRNWLFDQWRDTARISGFVEYDAPVLESEALYTRKAGEEVTQQLYNFVDKGERAVTLRPEMTPSLARMVMAKKGALPLPFKWFSIPQCWRYERMTRGRRREHFQWNMDIWGVAGEEAEAELIAAMVRFFEGVGLTSEDVGIKVNSRLVIGEVLNELGIPPEKFAATCVLVDKLEKVPVDAIQGELEELGLDRSVVEKLLNVLTNKSIESLRETLGADSKAVLQLEKFMSLCDAYGIQDWIILDASVVRGLAYYTGIVFEAFDRKGQLRAIAGGGRYDKLLETFGGDSIPAAGFGFGDAVIVELLKERNILPSFEESGIDTVVFAMNEKLFPVAIQAATALRKAGQSVDLILEAKKSKWVFKHADRLGAKYCLIVGESEYENGEVAVKDLKLGQQANVKIEELVS 491
BLAST of mRNA_E_fasciculatus_S2_contig702.15181.1 vs.
Match: Histidine--tRNA (ligase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BJC2_9STRA) HSP 1 Score: 546 bits (1408), Expect = 2.090e-184 Identity = 267/415 (64.34%), Postives = 328/415 (79.04%), Query Frame = 3
Query: 504 EKLDLKPPKGTRDVFPEDMRLRNWLFGHWRGVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVSGVSAEAELLGAMVTFFERVGLRAEDVGIRVNSRGVLTEVLHSLGVPGDKHTATCVLVDKLDKVPLEAVAGDLAELGLEETSVKRLLEVMELRDMEGVEAFLGKESPAAQELRKLFALAESYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGKLRAIAGGGRYDALLESFGGEALPAAGFGFGDAVIVELLSDRGLLPKETGPGVT-AVVFGWDDELQGAATEVAASLRREGVSVDLVLQPRKTKANFKHATRVGATYVVMVAPSEWKAGKVSVKDLRTSDQ 1745
+KLD PPKGTRD +P+DM LRN+LF +R A+S GF EYDAPVLESE LY RK+GE+V+ QLY FEDKGGRRVSLRPEMTPSLARMVMA K + +P+KWFSIPQCWRYERMTRGRRREHYQWN+DIWG++GV AEAELL MV FE +G+ AEDVGIR+NSRGV+ EVL VP +K ATCVLVDKLDK+P++A+ GD+ LGL + V+ L V+ ++ + + LG +S A +LR+LFALAE+YGI++WL D SVVRGLAYYTGTVFEAFDR+G+LRAIAGGGRYD LLE+FGGE+ PA GFGFGDAVIVEL+ +RG+LP G V VVF +DEL G A + A +R++G+SVD+VL+ +K K FKHA R+GA +VV+VAP EW+ G+VS+KDL +Q
Sbjct: 112 KKLDTNPPKGTRDFYPDDMLLRNYLFEKFRQAANSHGFREYDAPVLESEDLYVRKAGEDVSAQLYGFEDKGGRRVSLRPEMTPSLARMVMAGGKGIVMPLKWFSIPQCWRYERMTRGRRREHYQWNVDIWGIAGVEAEAELLATMVGLFESLGITAEDVGIRINSRGVIKEVLAGFDVPEEKFAATCVLVDKLDKMPIDAIQGDMEALGLARSVVENLTSVLTDASLDSMSSVLGPDSEALTDLRRLFALAEAYGITEWLAFDASVVRGLAYYTGTVFEAFDRKGELRAIAGGGRYDRLLETFGGESTPACGFGFGDAVIVELMKERGVLPSVEGQSVVDVVVFALNDELYGGAVKAAREIRKQGMSVDVVLEKKKMKWAFKHADRLGAKHVVVVAPDEWERGEVSIKDLTKGEQ 526
BLAST of mRNA_E_fasciculatus_S2_contig702.15181.1 vs.
Match: Histidine--tRNA (ligase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URK0_9STRA) HSP 1 Score: 545 bits (1404), Expect = 4.200e-184 Identity = 266/423 (62.88%), Postives = 337/423 (79.67%), Query Frame = 3
Query: 510 LDLKPPKGTRDVFPEDMRLRNWLFGHWRGVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKS-LTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVSGVSAEAELLGAMVTFFERVGLRAEDVGIRVNSRGVLTEVLHSLGVPGDKHTATCVLVDKLDKVPLEAVAGDLAELGLEETSVKRLLEVMELRDMEGVEAFLGKESPAAQELRKLFALAESYGISDWLVLDCSVVRGLAYYTGTVFEAFDRRGKLRAIAGGGRYDALLESFGGEALPAAGFGFGDAVIVELLSDRGLLPKETGPGVTAVVFGWDDELQGAATEVAASLRRE-GVSVDLVLQPRKTKANFKHATRVGATYVVMVAPSEWKAGKVSVKDLRTSDQKELPVGEVA 1772
L+ PPKGTRD +PEDMR+R WLF WR VA +FGF EYDAPVLESE+LYTRK+GE+VTQQLY F DKG R+V+LRPEMTPSLARMVMA+ K+ L++P+KWFSIPQCWRYERMTRGRRREH+QWNMDIWG+ GV EAELL AMVTFF++VGL ++DVGI+VNSR V++EVL LG+P +K ATCVLVDKLDKVPL+A+ GDL ELGL V++L++V+ +E + L +S A ++LR L L E+YGISDW++ D S++RGLAYYTG VFEAFDR+G+LRAIAGGGRYD LLE+FGG+ PAAGFGFGDAVIVELL +R LLP GV VVF +++L G A +VA++LR + G SVD+VL+ +KTK FKHA R+GA + ++VAP E+ G+VS+K++ + +Q + + +A
Sbjct: 94 LETNPPKGTRDFYPEDMRMRTWLFEEWRSVAKAFGFNEYDAPVLESEALYTRKAGEDVTQQLYNFVDKGERKVALRPEMTPSLARMVMARGKNGLSMPLKWFSIPQCWRYERMTRGRRREHFQWNMDIWGIPGVQVEAELLSAMVTFFKKVGLTSDDVGIKVNSRLVISEVLTELGIPPEKFAATCVLVDKLDKVPLDAIQGDLEELGLSREVVEKLVKVLTNNSIESIAEVLSPDSEAVKQLRSLLDLCEAYGISDWIMFDASIIRGLAYYTGVVFEAFDRKGELRAIAGGGRYDNLLEAFGGDPTPAAGFGFGDAVIVELLKERNLLPTFDTSGVDTVVFAMNEDLYGVAIQVASTLRTQTGQSVDVVLENKKTKWVFKHADRIGAKFCLIVAPDEYANGQVSIKNMESGEQTPVSIDALA 516 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig702.15181.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig702.15181.1 >prot_E_fasciculatus_S2_contig702.15181.1 ID=prot_E_fasciculatus_S2_contig702.15181.1|Name=mRNA_E_fasciculatus_S2_contig702.15181.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=576bp MRLQAQMLLSVASGSLGPAATVVRAFVPAASTAVRVHSAAASTRGAATAAback to top mRNA from alignment at E_fasciculatus_S2_contig702:17452..27252+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig702.15181.1 ID=mRNA_E_fasciculatus_S2_contig702.15181.1|Name=mRNA_E_fasciculatus_S2_contig702.15181.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=9801bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig702:17452..27252+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig702:17452..27252+ >mRNA_E_fasciculatus_S2_contig702.15181.1 ID=mRNA_E_fasciculatus_S2_contig702.15181.1|Name=mRNA_E_fasciculatus_S2_contig702.15181.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1728bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig702:17452..27252+ (Ectocarpus fasciculatus EfasUO2)back to top |