prot_E_fasciculatus_S2_contig701.15170.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig701.15170.1
Unique Nameprot_E_fasciculatus_S2_contig701.15170.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length620
Homology
BLAST of mRNA_E_fasciculatus_S2_contig701.15170.1 vs. uniprot
Match: D8LNZ8_ECTSI (60S ribosomal export protein NMD3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ8_ECTSI)

HSP 1 Score: 1061 bits (2745), Expect = 0.000e+0
Identity = 552/571 (96.67%), Postives = 553/571 (96.85%), Query Frame = 0
Query:   50 MEVVAPLTDGLAAPPPPEPEKQMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMAVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFTDPLTAQTADVTEEKYWRYEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPR-GRRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSCANLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKGDRHWKLGELEKDGGDXXXXXXXSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLATKPPPADGDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFEAGAAPAPNAELLLDDDPEL 619
            MEVVAP TDGLAAPPPPEPEKQMPT+LCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAM VTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTK      VKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQF DPLTAQTADVTEEKYWRYEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPR G RIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVL YDVS ANLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGK DRHWKLGELEKDGGDXXXXXX SEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLA KP  ADGDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFEAGAAPAPNAELLLDDDPEL
Sbjct:    1 MEVVAPPTDGLAAPPPPEPEKQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTK------VKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLAYDVSSANLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPAAADGDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFEAGAAPAPNAELLLDDDPEL 565          
BLAST of mRNA_E_fasciculatus_S2_contig701.15170.1 vs. uniprot
Match: A0A835ZB23_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB23_9STRA)

HSP 1 Score: 643 bits (1659), Expect = 8.530e-225
Identity = 343/557 (61.58%), Postives = 413/557 (74.15%), Query Frame = 0
Query:   64 PPPEPEKQMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMAVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFTDPLTAQTADVTEEKYWRYEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRGRRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSCANLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKGDRHWKLGELEKDGGDXXXXXXXSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQ---GLATKPPPADGDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFEAGAAPAPN-AELLLDDD 616
            PPP    ++ TV CC+CS PI PNPT MCV CIRTQVDITEGIA   T+ QCRGC R+L+P WVE  LESRELMA+CLRK+SGL +VKLVDASW+WTE HSRRLK+KLTVQKEV NGA+LQQA+ V F VRNQQC  C A++T+NTW AVVQ+RQRVDHKRTFFYLEQLILKHNAH    N+QT KDGMDF++ E++ +AR + FLE V+P +      +K+SKKL+SADNHSN +NFHYTYLVT+ PVCKDDLVLLP RLAE+LG  +RLAV QRI++ +   DP+TAQTADV  + Y R+EF +LLSSTRLVP+VVLG EPLP  + P+  +GRR+R+AR+AEV +ARECDLG ND + TA+SHLGH+L+AGDTVLGYDV+ ANLPE    G LK  LPDVVLVRKVY        G G R W+L  LEKD            KRD  A + DYERF+QQLE+DK+MRRQVNL+K    G A K       G  +D  E+DEE++R++ELLD M LD+ +A PD  +      A +F AG AP  N A L LDD+
Sbjct:    8 PPPSALPELATVACCICSAPIKPNPTHMCVQCIRTQVDITEGIALKPTIFQCRGCMRWLKPNWVEATLESRELMAICLRKVSGLNRVKLVDASWVWTEAHSRRLKLKLTVQKEVQNGAILQQALIVEFTVRNQQCTECQASYTNNTWKAVVQIRQRVDHKRTFFYLEQLILKHNAHVNAINVQTHKDGMDFFYAERNQAARMLSFLESVIPCR------IKNSKKLISADNHSNTYNFHYTYLVTVAPVCKDDLVLLPARLAETLGQFARLAVVQRISNGIALVDPVTAQTADVNVDHYARHEFVALLSSTRLVPFVVLGLEPLPLPSAPTMAQGRRMRRARLAEVTVARECDLGANDTQFTAISHLGHLLKAGDTVLGYDVASANLPEDHLRG-LKTALPDVVLVRKVYTS------GAGKRAWRLEALEKD------REAELSKRDADAHDADYERFMQQLEADKEMRRQVNLFKDLAIGAAAKT------GGSDDDNEVDEEQIRVEELLDDMRLDDPDAAPDDGD------AQVFSAGEAPGVNFAALALDDE 533          
BLAST of mRNA_E_fasciculatus_S2_contig701.15170.1 vs. uniprot
Match: A0A7S2WJE1_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJE1_9STRA)

HSP 1 Score: 511 bits (1316), Expect = 1.860e-172
Identity = 271/519 (52.22%), Postives = 351/519 (67.63%), Query Frame = 0
Query:   74 TVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMAVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFTDPLTAQTADVTEEKYWRY------EFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRGRRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSCANLPEGEATGDLKGR-LPDVVLVRKVYPRHDREGGGKGDRHWKLGELEKDGGDXXXXXXXSEKRDEAAAEK-DYERFLQQLESDKDMRRQVNLYKQ------GLATKPPPADGDGAMEDVEEMDEEEVRLDELLDAMTL 578
            TVLCC C  PI  NP+ MC  C+  + DITEGIAT L++H+CRGC+R+LRP WV  +LES+ELMA+CLRKI GL KV LVDA WIWTEPHS RLK+K+T+QKEV  GA+LQQ+  V FV+RNQQC+ C   +TD TW AVVQVRQRVDHKRTF+YLEQL+LKHN HS+C +IQ+F+DGMDFYF EK+ + RF DFL+G +P +      +K++KKL+S+DNHSNIFNF +T+L  ++P+CKDDL +LP RLA++L +IS L + +R+T  V   DPLT   A    + Y +        F  ++S+ RL+ Y+VLG EP+    R  A       K R+A VE+AR  DLG ND +   VSHLGHILR GDTVLGYDVS ANL + +     K R LP+VVLVRK+Y    +       R W L +LE D          + K+D+  ++  DYERF+QQLE DK+MR+ VNLY++        A    P + D   ED  EMDEE+V +DELL+ + +
Sbjct:   18 TVLCCQCGNPIAANPSMMCAHCLSVRSDITEGIATQLSVHRCRGCERWLRPSWVTAELESKELMALCLRKIKGLSKVNLVDAQWIWTEPHSMRLKIKVTIQKEVDGGAILQQSFVVEFVIRNQQCEDCQKQYTDGTWKAVVQVRQRVDHKRTFYYLEQLLLKHNVHSRCISIQSFRDGMDFYFAEKNEAVRFTDFLQGNIPVR------IKNTKKLISSDNHSNIFNFKFTFLCIIIPLCKDDLTVLPVRLAKTLSDISPLVLVERVTRLVHLVDPLTCDRATFDSDHYGKLTSGVESSFGGIMSAPRLIEYIVLGIEPILASERAGAASKVFKSKTRLAHVEVARASDLGVNDTKFHTVSHLGHILRTGDTVLGYDVSAANLDDADVARIEKRRALPEVVLVRKLYGVESQR------RGWTLRKLEYDA---VEEPTRTRKKDDMESDSADYERFIQQLEGDKEMRKHVNLYRREAGPRKAAAAAVDPLEEDEGEED--EMDEEQVHIDELLEGLDI 519          
BLAST of mRNA_E_fasciculatus_S2_contig701.15170.1 vs. uniprot
Match: T0RPV6_SAPDV (60S ribosomal export protein NMD3 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0RPV6_SAPDV)

HSP 1 Score: 493 bits (1268), Expect = 6.760e-166
Identity = 259/518 (50.00%), Postives = 346/518 (66.80%), Query Frame = 0
Query:   68 PEKQMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMAVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFTDPLTAQTADVTEEKYWRYEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRGRRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSCA--NLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKGDRHWKLGELEKDGGDXXXXXXXSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLATKPPPADGDGAMEDVEEMDEEE----VRLDELLDAMTLD 579
            PE+ +P +LCCMC++PI  N  +MCV C++ QVD+TEGI   + MHQCRGC ++ RP WV  +LESREL+A+CL+KISGL KVKLVDA W+WTEPHS+RLK+KLTVQKEV NGA+LQQ+  VTF+VRNQQCD C A+FT+N+W AVVQVRQ+VDHKRTFFYLEQLILKH  H + ++I++  DG+DF+F E++H+ RFVDFL   VP K      +K +KKL+SADNHSN  N+ +TY V L  VCKDDLV LP +LA  LGNIS L +  ++TS++   DP T Q A++  +KYWRY F +L SS +LV Y VL + PL        P  R  RK R+AE+E+ R  D G ND R    +HLG +L  GDT +GYD+S +  N  + +   +    LPDV+LVRK + R  +    K  R+WKL  +E             +K ++   E DY+ FL +LE DK+MR ++N+YK          D D A +D +  D++E    + ++ELLD M ++
Sbjct:    5 PEQSLPNILCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQSFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTSSIESHPDGVDFFFVERNHALRFVDFLSETVPIK------LKTAKKLISADNHSNTANYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCIVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLVEYTVLDSNPLQIPTLGGVP-VRTNRKTRLAEMEIVRNSDFGVNDTRFQTTTHLGMLLNVGDTAMGYDLSTSVFNDSDTKPLDEAGITLPDVILVRKQFLRRVQ----KRSRNWKLKNIE-----GIESAVPVKKAEQTKTEMDYQHFLDELEDDKEMRSKINIYK---------VDDDKAGDDQDMEDDDEGTGVIPVEELLDDMKIE 497          
BLAST of mRNA_E_fasciculatus_S2_contig701.15170.1 vs. uniprot
Match: D0MSQ0_PHYIT (60S ribosomal export protein NMD3 n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0MSQ0_PHYIT)

HSP 1 Score: 489 bits (1260), Expect = 1.250e-164
Identity = 266/521 (51.06%), Postives = 354/521 (67.95%), Query Frame = 0
Query:   71 QMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMAVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFTDPLTAQTADVTEEKYWRYEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRGRRIR---KARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSCANLPEGEATGDLKG--RLPDVVLVRKVYPRHDREGGGKGDRHWKLGELEKDGGDXXXXXXXSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLATKPP-PADGDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGP 585
            QMPT+LCCMC+ PI  N  + CV C+++QVD+TEGI   + +HQCRGC R+ RP WV  +LESREL+A+CL+KI+ L +VKL+DA+WIWTEPHSRRLK+KLTVQKEV +  ++QQ+  VTFVVRNQQCD C A+F + +W AVVQVRQRVDHKRTFF+LEQLILKH AH + TNI++  DG+DF+F+E++H+ RFVDFL+  VP K      VK +KKL+SADNHSN  N+ +TY V + PVCKDDLVLLP +LA  LGN+S L + Q +TS++   DP T Q A+V  EKYWRY F +L S   +    VL + P+   A PS   GR IR   K R+A++E+ R+ D G ND R   VSHLG +L  GD+  GYD++ A   + +    ++    LPDVVLV+K++PR  +    K  R+WKL ++E              K D +  E+DYE+F+ +LE DK+MR Q+NLYK    TKP  PA+ D AM D +++    V L ELLD + + + +  P
Sbjct:    7 QMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVLSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMK------VKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEVDSEKYWRYPFRALRSIKAMTDLTVLDSNPM---AIPSGG-GRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSGLTLPDVVLVKKMFPRRIQ----KRARNWKLKKME-----GVEQAGPVRKADLSKEEQDYEQFMDELEEDKEMRSQINLYKD--ETKPAQPAEDDDAM-DEDDVGAPAVELHELLDDLAMKDDDPTP 505          
BLAST of mRNA_E_fasciculatus_S2_contig701.15170.1 vs. uniprot
Match: W2I7I2_PHYPR (60S ribosomal export protein NMD3 n=9 Tax=Peronosporaceae TaxID=4777 RepID=W2I7I2_PHYPR)

HSP 1 Score: 489 bits (1259), Expect = 1.650e-164
Identity = 264/514 (51.36%), Postives = 350/514 (68.09%), Query Frame = 0
Query:   71 QMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMAVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFTDPLTAQTADVTEEKYWRYEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRGRRIR---KARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSCANLPEGEATGDLKG--RLPDVVLVRKVYPRHDREGGGKGDRHWKLGELEKDGGDXXXXXXXSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLATKPP-PADGDGAMEDVEEMDEEEVRLDELLDAMTL 578
            QMPT+LCCMC+ PI  N  + CV C+++QVD+TEGI   + +HQCRGC R+ RP WV  +LESREL+A+CL+KI+ L +VKL+DA+WIWTEPHSRRLK+KLTVQKEV +  ++QQ+  VTFVVRNQQCD C A+F + +W AVVQVRQRVDHKRTFF+LEQLILKH AH + TNI++  DG+DF+F+E++H+ RFVDFL+  VP K      VK +KKL+SADNHSN  N+ +TY V + PVCKDDLVLLP +LA  LGN+S L + Q +TS++   DP T Q A++  EKYWRY F +L S   +  + VL + P+   A PS   GR IR   K R+A++E+ R+ D G ND R   VSHLG +L  GD+  GYD++ A   + +    ++    LPDVVLV+K++PR  +    K  R+WKL ++E              K D +  E+DYE+FL +LE DK++R Q+NLYK    TKP  PAD D   ED  ++    V L ELLD + +
Sbjct:    7 QMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVMSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMK------VKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEIDSEKYWRYPFRALRSIKAMTDFTVLDSNPM---AIPSGG-GRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSGMTLPDVVLVKKMFPRRIQ----KRARNWKLKKME-----GVEQAGPVRKTDLSKEEQDYEQFLDELEEDKELRSQINLYKDD--TKPAKPADDDAMEED--DVGAPAVELHELLDDLAM 497          
BLAST of mRNA_E_fasciculatus_S2_contig701.15170.1 vs. uniprot
Match: A0A6G0XWA3_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWA3_9STRA)

HSP 1 Score: 488 bits (1256), Expect = 4.370e-164
Identity = 261/524 (49.81%), Postives = 340/524 (64.89%), Query Frame = 0
Query:   69 EKQMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMAVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFTDPLTAQTADVTEEKYWRYEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRGRRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDV--SCANLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKGDRHWKLGELEKDGGDXXXXXXXSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQG------LATKPPPADGDGAMEDVEEMDEEEVRLDELLDAMTLDNANAG 584
            E  +P +LCC+C++PI  N  +MCV C++ QVD+TEGI   + MHQCRGC ++ RP WV  +LESREL+A+CL+KI+GL KVKLVDA WIWTEPHS+RLK+KLTVQKEV NGA+LQQ+  VTF+VRNQQCD C A+FT+++W AVVQVRQ+V+HKRTFFYLEQLILKH  H + TNI++  DG+DF+F E++H+ RFVDFL+  VP        +K +KKL+SADNHSN  N+ +TY V + PVCKDDLV LP +LA  LGNIS L +  ++TS++   DP T Q A++  EKYWRY F +L SS +L  Y VL + P+    +   P  R  RK R+AE+E+ R  D G ND R   VSHLG +L  GDT +GYD+  S  N  + +   +    LPDVVLVRK + R  +    K  R WKL  +E             +K D    + DYE FL  LE DK+MR ++N+YK                DGDG           ++ LDELLD MT+++   G
Sbjct:    5 EHSLPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPQWVSAELESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDECQASFTNHSWKAVVQVRQKVEHKRTFFYLEQLILKHRVHEKTTNIESQPDGVDFFFVERNHALRFVDFLQETVPI------SLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIENEKYWRYPFKALRSSKQLTEYTVLDSTPMEIPMKGGVP-VRTNRKTRLAELEIVRNSDFGVNDTRFQTVSHLGMLLNVGDTAMGYDLVTSVFNDADTKPLDEAGITLPDVVLVRKQFLRRVQ----KRQRKWKLKTIE-------GIESMGKKDDPTKHDLDYEHFLNDLEQDKEMRSRINIYKNDEXXXXXXXXXASMEDGDGG----------DIPLDELLDDMTMEDQENG 500          
BLAST of mRNA_E_fasciculatus_S2_contig701.15170.1 vs. uniprot
Match: W7TWI9_9STRA (60S ribosomal export protein NMD3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWI9_9STRA)

HSP 1 Score: 490 bits (1261), Expect = 1.990e-163
Identity = 279/567 (49.21%), Postives = 367/567 (64.73%), Query Frame = 0
Query:   76 LCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLR----PGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMAVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFTDPLTAQTADVTEEKYWR--YEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRGRRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSCANLPEGEATG-DLKGR--LPDVVLVRKVYPRHDREGGGKGDRHWKLGELEKDGGDXXXXXXXSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQG------------------------------LATKPPPADGDGAM--------------EDVEEMDEEEVRLDELLDAMTLDNANAGPDGEE 589
            +CCMC++ I PNPT+MC+ C+RTQV+I  G++T +TMHQCRGC +Y+      GW   + ESRELMAVCLRK++GL +++LVDA WIWTEPHS+RLK+KLTVQ+EV NGAVLQ+A+ V FVVRNQQC  C A++T   W A+VQVRQRVDHKRTF +LEQLILKHNAH+Q   IQ F DGMDFYF E++ +ARF +FLE   P +      VK SKKLVS D+HSN+FN+ YT ++ +VPVCKDDLV+LP +LA++LG+I+RL +  R+ + +   DPLT QTA+V+ EKY +  +EF +LLS++RLV ++VLG+EP     + SAP  RR ++ R+AEVE+A   DLG ND R    +HLGHILRAGDTVLGY ++ A+L   +A   + K R  LPD VLVRKVY        G+    W+L + E D           E  +    ++D   + QQLE D++MRR+VN+YK G                              +       +GDG+               EDV E DEE +RLDELLD + LD+ +A PD  E
Sbjct:   18 ICCMCAINIQPNPTNMCLQCLRTQVNIASGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVDAGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQASYTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDFYFAERNQAARFTEFLETACPVR------VKQSKKLVSQDDHSNVFNYKYTTIIEIVPVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVEKYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAP-ARRSKRHRLAEVEVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELETKTRAGLPDAVLVRKVYSNE-----GRIRPAWRLKKFEAD------EMEVVEAGNAEQEDRDLRDYRQQLEGDREMRRRVNMYKAGRPLPGGAEDTDHENAALGQKAGKTKGKVEKMTVVSAMGEGDGSTRLDERDRSTNEGLGEDVGEDDEEALRLDELLDDLELDDPDAPPDDHE 566          
BLAST of mRNA_E_fasciculatus_S2_contig701.15170.1 vs. uniprot
Match: A0A7S2AZN0_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AZN0_9STRA)

HSP 1 Score: 483 bits (1242), Expect = 5.120e-162
Identity = 265/505 (52.48%), Postives = 346/505 (68.51%), Query Frame = 0
Query:   91 MCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMAVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFTDPLTAQTADVTEEKYWRY-EFPSLLSSTRLVPYVVLGTEPLP-EKARPSAPRGRRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSCANLP----EGEATGDLKGRLPDVVLVRKVYPRHDREGGGKGD----RHWKLGEL-----EKDGGDXXXXXXXSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLATKPPPADGDGAMEDVEEMDEEEVRLDELLDAMTLDN 580
            MC  C+++ VDIT+GI T L++++CRGCQ++L+PGW+E  LES EL+A+CL+KI GL KVKLVDASW+WTEPHS RLK+KL +QKEV N AVLQQA  V +V+RNQQC  C   +T   W AVVQVRQRVDHKRTF+YLEQL+LKH  H+ C +IQTF+DGMDFYF E++ + RF DFL+ VVP +      +K++KKL+S+DNHSN+FN+ +T+L  + P+CKDDLV+LPK LA +LGNIS L + +R+++ +   DP T Q A    E +++   F ++LS+ RLV YVVLGTE L  ++   S P   + RK R+ EVELAR  DLG ND R+T VSHLGH+LRAGDTVLGYD+    L     E  A  + +  LPD  LVRK+Y       GG G+    R WKL EL     E++GG          K  E  A KDYE+F+QQLE D++MRRQVNL+K          D   A +D  EMDE+E+R+ ELL+ + LD+
Sbjct:    1 MCAQCLKSAVDITDGIPTQLSVYRCRGCQKWLKPGWIEADLESGELLALCLKKIRGLNKVKLVDASWVWTEPHSMRLKIKLNIQKEVMNAAVLQQAFVVEYVIRNQQCSDCQKQYTGGVWKAVVQVRQRVDHKRTFYYLEQLLLKHGVHTNCLSIQTFRDGMDFYFAERNQAVRFTDFLQTVVPIR------MKNTKKLISSDNHSNLFNYKFTHLGVIAPLCKDDLVVLPKALALTLGNISPLVLIERVSTFIHLVDPFTCQRASFDIEHFYKVGAFGAVLSAARLVEYVVLGTEDLILDERESSTPTPTQKRKKRLVEVELARSADLGVNDTRLTCVSHLGHLLRAGDTVLGYDLERGALHSLDRETMAQVEKRRALPDSALVRKLYGVGS---GGDGETTKSRRWKLKELAVQEEERNGG----------KGAEDVAMKDYEQFMQQLEGDREMRRQVNLFK--ATDDDQDMDTAVATDDACEMDEQEIRIGELLEDLGLDD 484          
BLAST of mRNA_E_fasciculatus_S2_contig701.15170.1 vs. uniprot
Match: A0A024UHG0_9STRA (60S ribosomal export protein NMD3 n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024UHG0_9STRA)

HSP 1 Score: 482 bits (1240), Expect = 1.300e-161
Identity = 257/516 (49.81%), Postives = 339/516 (65.70%), Query Frame = 0
Query:   68 PEKQMPTVLCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMAVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFTDPLTAQTADVTEEKYWRYEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRGRRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSCA--NLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKGDRHWKLGELEKDGGDXXXXXXXSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLATKPPPADGDGAMEDVEEMDEEEVRLDELLDAMTLDNA 581
            PE ++P +LCC+C++PI  N  +MCV C++ QVD+TEGI   + MHQCRGC ++ RP WV   LESREL+A+CL+KI+GL KVKLVDA WIWTEPHS+RLK+KLTVQKEV NGA+LQQ+  VTF+VRNQQCD C A+FT+++W AVVQVRQ+V+HKRTFF+LEQLILKH  H + T+I++  DG+DF+F E++H+ RFVDFL+  VP        +K +KKL+SADNHSN  N+ +TY V + PVCKDDLV LP +LA  LGNIS L +  ++TS++   DP T Q A++  +KYWRY F +L SS +L  Y VL + PL    +   P  R  RK R+A+V++ R  D G ND R   V+HLG +L  GDT +GYD+S +  N  + +   +    LPDVVLVRK + R  +    K  R WKL  +E             +K D+   + DYE FL  LE DKDMR ++N+YK   AT     D               + LDELLD + +D A
Sbjct:    5 PEHELPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPQWVSADLESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDDCQASFTNHSWKAVVQVRQKVEHKRTFFFLEQLILKHRVHEKTTSIESQPDGVDFFFVERNHALRFVDFLQETVPI------SLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLTEYTVLDSSPLEISTKGGIP-VRTNRKTRLADVDIVRNSDFGVNDMRFHTVTHLGMLLNVGDTAMGYDLSTSVFNDLDTKPLDEAGISLPDVVLVRKQFLRRVQ----KRSRKWKLKTIE-----GIEPTMPLKKADQTKHDLDYEHFLNDLEEDKDMRSRINIYK---ATDGNDHDDXXXXXXXXXXXXGAIPLDELLDDLNMDEA 501          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig701.15170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNZ8_ECTSI0.000e+096.6760S ribosomal export protein NMD3 n=2 Tax=Ectocarp... [more]
A0A835ZB23_9STRA8.530e-22561.5860S ribosomal export protein NMD3 n=1 Tax=Tribonem... [more]
A0A7S2WJE1_9STRA1.860e-17252.2260S ribosomal export protein NMD3 n=1 Tax=Rhizochr... [more]
T0RPV6_SAPDV6.760e-16650.0060S ribosomal export protein NMD3 n=4 Tax=Saproleg... [more]
D0MSQ0_PHYIT1.250e-16451.0660S ribosomal export protein NMD3 n=18 Tax=Peronos... [more]
W2I7I2_PHYPR1.650e-16451.3660S ribosomal export protein NMD3 n=9 Tax=Peronosp... [more]
A0A6G0XWA3_9STRA4.370e-16449.8160S ribosomal export protein NMD3 n=1 Tax=Aphanomy... [more]
W7TWI9_9STRA1.990e-16349.2160S ribosomal export protein NMD3 n=2 Tax=Monodops... [more]
A0A7S2AZN0_9STRA5.120e-16252.4860S ribosomal export protein NMD3 n=1 Tax=Dictyoch... [more]
A0A024UHG0_9STRA1.300e-16149.8160S ribosomal export protein NMD3 n=7 Tax=Aphanomy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007064Nmd3, N-terminalPFAMPF04981NMD3coord: 77..309
e-value: 7.3E-72
score: 241.7
IPR039768Ribosomal export protein Nmd3PANTHERPTHR12746NONSENSE-MEDIATED MRNA DECAY PROTEIN 3coord: 69..579

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig701contigE_fasciculatus_S2_contig701:12390..16406 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig701.15170.1mRNA_E_fasciculatus_S2_contig701.15170.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig701 12390..16406 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig701.15170.1 ID=prot_E_fasciculatus_S2_contig701.15170.1|Name=mRNA_E_fasciculatus_S2_contig701.15170.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=620bp
PVQPRTLYSQPRHYPRALLVKRLVSFSLFDNSKRGRHKRDGKSKPHISVM
EVVAPLTDGLAAPPPPEPEKQMPTVLCCMCSLPIPPNPTSMCVLCIRTQV
DITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKV
KLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMAVTFVVRNQQCDT
CAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKD
GMDFYFTEKSHSARFVDFLEGVVPTKASRSRGVKHSKKLVSADNHSNIFN
FHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFTDPL
TAQTADVTEEKYWRYEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRGRR
IRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSCANL
PEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKGDRHWKLGELEKDGGDD
GGGGGVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLATKPPPA
DGDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFE
AGAAPAPNAELLLDDDPEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039768Nmd3
IPR007064Nmd3_N