prot_E_fasciculatus_S2_contig7009.15168.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig7009.15168.1
Unique Name	prot_E_fasciculatus_S2_contig7009.15168.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	517

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig7009.15168.1 vs. uniprot
Match: A0A6H5JI88_9PHAE (Myb-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI88_9PHAE)

HSP 1 Score: 810 bits (2091), Expect = 5.720e-285
Identity = 458/605 (75.70%), Postives = 464/605 (76.69%), Query Frame = 0

Query:    1 SRSPSPQAPATPPKPAHERLWSGVQGPLWRFRCSPRTPVLLAPPSAILEAVAGGSGLCPNGEQPRPDGSSVRRGSLLGLGPIDAVLIFDEGPXXXXXXXXXXXXXXXXXXXXX-LQSLLTLPLCARRSSAPRAIRSVSAXXXXXXXXXXXXXXXXXXXXVATAAGRAEGENVVTVVRYVAEGTIEATLEGEGDKGTSSLGA--------------------------------------------------------------------------------------GVEGITVRCSLEGKTFLKELTQGEAASASASEGTEAVSLSGTKRKAADGG-ADTPGADGKHWSEGAPPLRRTCPWSPVGVEDILVEEMVQMNPDDFDTGRGCFDTDETRVFARLADGGHPVPPPLLSYAVDATLAATPGRSFTERVRDLHLLGISPEPFLHCMPCIDLAMPPDHNMVLNEAVEVPSWMSTSFGQDLSCSLSYVDRLPSNRNKKLKKALSPRESSRREGEQPGAGRRNKTSVEEWTKTEDSLLVSAVQQFGENWVLVAFSINKCPILRGRMRSGSQCKARHANLVALGAAGQRSQRGARPLSVRLPPTY 517
            SRSPSPQAPATPPKPAHERLWSGVQGPLWRFRCSPRTPVLLAPPSAILEAVAGGSGLCPNGEQPRPDGSSVR+GSL GLGPIDAVLIFDEGP        XXXXXXXX      LQSLLTLPLCARRSSAPRAIRS+ A                    VATAAGRAEGE VVTVVRYV +GTIE TLEGEGDKG SSLG                                                                                       GVEGI VRCSLEGKT+LK   QGEAASASASEGTEAVSLSGTKRKA  GG AD  GADGKHWSEGAPPLRRTCPWSPV VEDILVEEMVQMNPDDFDT RGCFDTDETRVFARLA+GGHPVPPPLLSYAVDATLAATPGRSFTERVRDLHLLGISPEPFLHCMPCIDLAMPPDHNMVLNEAVEVPSWMSTSFGQDL CSLSYVDRLPSNR+KKLKKALSPRESSRREGE PGAGRRNKTSVEEWTK EDSLLVSAVQQFGENWVLVAFSINKCPILRGRMRSGSQCKARHANLVALGAAGQRSQRGARPLSVRLPPTY
Sbjct:   87 SRSPSPQAPATPPKPAHERLWSGVQGPLWRFRCSPRTPVLLAPPSAILEAVAGGSGLCPNGEQPRPDGSSVRKGSLCGLGPIDAVLIFDEGPPITRATATXXXXXXXXAALAAALQSLLTLPLCARRSSAPRAIRSMLATGGGAADENGRVDRGG----VATAAGRAEGERVVTVVRYVVDGTIEETLEGEGDKGISSLGGRPLGEVLFGPTYSDRGSAKPVSAGATSEAASAPEIPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPPAAGAEVGVEGIAVRCSLEGKTYLK---QGEAASASASEGTEAVSLSGTKRKAGGGGGADMLGADGKHWSEGAPPLRRTCPWSPVRVEDILVEEMVQMNPDDFDTERGCFDTDETRVFARLAEGGHPVPPPLLSYAVDATLAATPGRSFTERVRDLHLLGISPEPFLHCMPCIDLAMPPDHNMVLNEAVEVPSWMSTSFGQDLGCSLSYVDRLPSNRSKKLKKALSPRESSRREGEHPGAGRRNKTSVEEWTKMEDSLLVSAVQQFGENWVLVAFSINKCPILRGRMRSGSQCKARHANLVALGAAGQRSQRGARPLSVRLPPTY 684

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BLAST of mRNA_E_fasciculatus_S2_contig7009.15168.1 vs. uniprot
Match: D7FME7_ECTSI (Myb-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME7_ECTSI)

HSP 1 Score: 823 bits (2127), Expect = 1.190e-277
Identity = 456/542 (84.13%), Postives = 461/542 (85.06%), Query Frame = 0

Query:    1 SRSPSPQAPATPPKPAHERLWSGVQGPLWRFRCSPRTPVLLAPPSAILEAVAGGSGLCPNGEQPRPDGSSVRRGSLLGLGPIDAVLIFDEGPXXXXXXXXXXXXXXXXXXXXX------LQSLLTLPLCARRSSAPRAIRSVSAXXXXXXXXXXXXXXXXXXXXVATAAGRAEG------------ENVVTVVRYVAEGTIEATLEGEGDKGTSSLGAGVEGITVRCSLEGKTFLKELTQGEAASASASEGTEAVSLSGTKRKAADG-------GADTPGADGKHWSEGAPPLRRTCPWSPVGVEDILVEEMVQMNPDDFDTGRGCFDTDETRVFARLADGGHPVPPPLLSYAVDATLAATPGRSFTERVRDLHLLGISPEPFLHCMPCIDLAMPPDHNMVLNEAVEVPSWMSTSFGQDLSCSLSYVDRLPSNRNKKLKKALSPRESSRREGEQPGAGRRNKTSVEEWTKTEDSLLVSAVQQFGENWVLVAFSINKCPILRGRMRSGSQCKARHANLVALGAAGQRSQRGARPLSVRLPPTY 517
            SRSP PQAP TPPKPAHERLWSGVQGPLWRFRCSPRTPVLLAPPSAILEAVAGGSGLCPNGEQPRPDGSSVRRGSLLGLGPIDAVLIFDEGP        XXXXXXXXXX         LQSLLTLP CARRSSAPRAIRS+ A                     A   GR +G            E+VVTVVRYVA GTIE TLEGEGDKG SSLGAG EGI VRCSLEGKTFLK   QGEAASASASEGTEAVSLSGTKRKAADG       G D  GA+GKHWSEGAPPLRRTCPWSPVGVEDILVEEMVQMNPDDFDTGRGCFDTDETRVFARLADGGHPVPPPLLSYAVDATLA TPGRSFTERVRDLHLLGISPEPFLHCMPCIDLAMPPDHNMVLNEAVEVPSWMSTSFGQDLSCSLSYVDRLPSNRNKKLKKALSPRESSRREGEQPGAGRRNKTSVEEWTK ED+LLVSAVQQFGENWVLVAFSINKCPILRGRMRSGSQ KARHANLVALGAAGQRS RGARP SVRLPPTY
Sbjct: 1484 SRSPFPQAPVTPPKPAHERLWSGVQGPLWRFRCSPRTPVLLAPPSAILEAVAGGSGLCPNGEQPRPDGSSVRRGSLLGLGPIDAVLIFDEGPPITTRTTAXXXXXXXXXXWSRAALAAALQSLLTLPRCARRSSAPRAIRSMPATGGGA---------------AADENGRVDGXXXXXXXXXXXXESVVTVVRYVANGTIEETLEGEGDKGISSLGAGGEGIAVRCSLEGKTFLK---QGEAASASASEGTEAVSLSGTKRKAADGXXXXGCSGVDMLGANGKHWSEGAPPLRRTCPWSPVGVEDILVEEMVQMNPDDFDTGRGCFDTDETRVFARLADGGHPVPPPLLSYAVDATLATTPGRSFTERVRDLHLLGISPEPFLHCMPCIDLAMPPDHNMVLNEAVEVPSWMSTSFGQDLSCSLSYVDRLPSNRNKKLKKALSPRESSRREGEQPGAGRRNKTSVEEWTKMEDTLLVSAVQQFGENWVLVAFSINKCPILRGRMRSGSQNKARHANLVALGAAGQRSPRGARPKSVRLPPTY 2007

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig7009.15168.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig7009.15168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JI88_9PHAE	5.720e-285	75.70	Myb-like domain-containing protein n=1 Tax=Ectocar...	[more]
D7FME7_ECTSI	1.190e-277	84.13	Myb-like domain-containing protein n=1 Tax=Ectocar...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 439..495 e-value: 0.0081 score: 25.4
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 442..489 e-value: 1.7E-6 score: 28.1
None	No IPR available	GENE3D	1.10.10.60		coord: 434..492 e-value: 3.0E-8 score: 35.2
IPR017877	Myb-like domain	PROSITE	PS50090	MYB_LIKE	coord: 435..493 score: 7.77
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 437..493

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig7009	contig	E_fasciculatus_S2_contig7009:237..7588 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig7009.15168.1	mRNA_E_fasciculatus_S2_contig7009.15168.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig7009 237..7588 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig7009.15168.1 ID=prot_E_fasciculatus_S2_contig7009.15168.1|Name=mRNA_E_fasciculatus_S2_contig7009.15168.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=517bp
SRSPSPQAPATPPKPAHERLWSGVQGPLWRFRCSPRTPVLLAPPSAILEA
VAGGSGLCPNGEQPRPDGSSVRRGSLLGLGPIDAVLIFDEGPPTTTTTTA
PPPSSSRAALTAALQSLLTLPLCARRSSAPRAIRSVSAAAPAGGGAADEN
GRREEGGGVATAAGRAEGENVVTVVRYVAEGTIEATLEGEGDKGTSSLGA
GVEGITVRCSLEGKTFLKELTQGEAASASASEGTEAVSLSGTKRKAADGG
ADTPGADGKHWSEGAPPLRRTCPWSPVGVEDILVEEMVQMNPDDFDTGRG
CFDTDETRVFARLADGGHPVPPPLLSYAVDATLAATPGRSFTERVRDLHL
LGISPEPFLHCMPCIDLAMPPDHNMVLNEAVEVPSWMSTSFGQDLSCSLS
YVDRLPSNRNKKLKKALSPRESSRREGEQPGAGRRNKTSVEEWTKTEDSL
LVSAVQQFGENWVLVAFSINKCPILRGRMRSGSQCKARHANLVALGAAGQ
RSQRGARPLSVRLPPTY

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017877	Myb-like_dom
IPR001005	SANT/Myb