prot_E_fasciculatus_S2_contig7005.15163.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7005.15163.1
Unique Nameprot_E_fasciculatus_S2_contig7005.15163.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length71
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig7005.15163.1 vs. uniprot
Match: A0A6H5L1R4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1R4_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 1.650e-37
Identity = 63/70 (90.00%), Postives = 66/70 (94.29%), Query Frame = 0 
Query:    1 MDLVVLQGLGRIPGGTNKTPPRARGFAEDDIVGGICGEGGKGGSWELRPGSNGAVRIHKTGFFEKQLAHN 70
            MDLVVLQG+GRIPGGT+K PPRARGFAEDDI GGICGEGG+GG WELRPGSNGAVRIHK GFFEKQLAHN
Sbjct:  235 MDLVVLQGIGRIPGGTDKMPPRARGFAEDDIAGGICGEGGEGGPWELRPGSNGAVRIHKMGFFEKQLAHN 304
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BLAST of mRNA_E_fasciculatus_S2_contig7005.15163.1 vs. uniprot
Match: D7G2Y7_ECTSI (Similar to TNF receptor associated factor 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y7_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 4.270e-36
Identity = 65/70 (92.86%), Postives = 68/70 (97.14%), Query Frame = 0 
Query:    1 MDLVVLQGLGRIPGGTNKTPPRARGFAEDDIVGGICGEGGKGGSWELRPGSNGAVRIHKTGFFEKQLAHN 70
            MDLVVLQG+GRIPGGT+KTPPRARGFAEDDI+GGICGEGGKGG  ELRPGSNGAVRIHKTGFFEKQLAHN
Sbjct:  688 MDLVVLQGIGRIPGGTDKTPPRARGFAEDDIIGGICGEGGKGGPRELRPGSNGAVRIHKTGFFEKQLAHN 757
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7005.15163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L1R4_9PHAE1.650e-3790.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2Y7_ECTSI4.270e-3692.86Similar to TNF receptor associated factor 4 n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7005contigE_fasciculatus_S2_contig7005:2882..4488 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7005.15163.1mRNA_E_fasciculatus_S2_contig7005.15163.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7005 2475..5360 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7005.15163.1 ID=prot_E_fasciculatus_S2_contig7005.15163.1|Name=mRNA_E_fasciculatus_S2_contig7005.15163.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=71bp
MDLVVLQGLGRIPGGTNKTPPRARGFAEDDIVGGICGEGGKGGSWELRPG
SNGAVRIHKTGFFEKQLAHN*
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