prot_E_fasciculatus_S2_contig70.15154.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig70.15154.1
Unique Nameprot_E_fasciculatus_S2_contig70.15154.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length213
Homology
BLAST of mRNA_E_fasciculatus_S2_contig70.15154.1 vs. uniprot
Match: D8LMN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN4_ECTSI)

HSP 1 Score: 397 bits (1021), Expect = 9.410e-140
Identity = 194/203 (95.57%), Postives = 198/203 (97.54%), Query Frame = 0
Query:   10 VWSRPPISLRAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHRHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLLTQQKGGEAEALNVREAFLGGETGR 212
            VWSRP ISLRAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMK+GIAAGLRRGRHRH+HGLGGLLPDTVD+QIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPL+ Q K GEAEA NVREAFLGGETGR
Sbjct:    2 VWSRPRISLRAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKSGIAAGLRRGRHRHKHGLGGLLPDTVDFQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLVAQ-KVGEAEAFNVREAFLGGETGR 203          
BLAST of mRNA_E_fasciculatus_S2_contig70.15154.1 vs. uniprot
Match: A0A6H5JSR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR3_9PHAE)

HSP 1 Score: 382 bits (981), Expect = 2.370e-123
Identity = 185/194 (95.36%), Postives = 190/194 (97.94%), Query Frame = 0
Query:   19 RAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHRHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLLTQQKGGEAEALNVREAFLGGETGR 212
            +AYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRH HRHGLGGLLPDTVDYQIKGLTDGNRLSVFV+CQQRENSANMGRRFGNS+LFHKLLARECNRHGISYTLPAQPL+ Q KGGEAEA N+REAFLGGETGR
Sbjct:  837 KAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHCHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVVCQQRENSANMGRRFGNSNLFHKLLARECNRHGISYTLPAQPLVAQ-KGGEAEAFNIREAFLGGETGR 1029          
BLAST of mRNA_E_fasciculatus_S2_contig70.15154.1 vs. uniprot
Match: A0A835YNU8_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU8_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 3.400e-20
Identity = 63/170 (37.06%), Postives = 87/170 (51.18%), Query Frame = 0
Query:   19 RAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHRHRHGLGGLL---PDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQ 185
            RAYDVGD VY  D+   E  Y+V RINMLTTVFRRWD   T++ N  +AK+ IRN  RS   +    + VS+ TP  KL+ +K        R +   R   G L    P++VDY  + +     + VF +  Q+ +  +   +  N  L    LA  C+  G+ Y LP Q
Sbjct:  966 RAYDVGDRVYIKDELNDEANYVVQRINMLTTVFRRWDDHYTILPNQQLAKREIRNMRRSGDGVMLMTLLVSIATPRAKLEALKE-------RMQEYARAVTGPLYSCDPNSVDYCCRRVISCTNMEVFFVYSQKGSWQDNYLKVKNFHLMSLRLAEVCHELGLEYALPTQ 1128          
BLAST of mRNA_E_fasciculatus_S2_contig70.15154.1 vs. uniprot
Match: A0A6H5JBC1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC1_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 3.860e-17
Identity = 56/178 (31.46%), Postives = 95/178 (53.37%), Query Frame = 0
Query:   19 RAYDVGDPVYFVDD--TGGEDWY--IVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHRHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLLTQQK 192
            R YDVGD V+  DD  T G +    +VT++++ TT FRRWD Q   I N+++A+K I N  R++   H   I V+  T   KL+ + N +    ++     +    GL P  + + + G+ D  RLS+ ++ +QR N  +M +++   S+    +   C+  GI+Y LP  P++ + K
Sbjct:  993 RLYDVGDRVHIYDDVQTAGVEPMNVVVTKVDLRTTSFRRWDEQIFYIPNHLLAEKTIVNIQRTAHQWHEFYIHVAATTSSRKLETLHNALQQFAKK-----KDKPEGLYP-RMGFSLTGIEDSTRLSIRIVFRQRGNWQSMEKKWACQSMCTWAIKNACDTIGITYYLPEVPVVMKNK 1164          
BLAST of mRNA_E_fasciculatus_S2_contig70.15154.1 vs. uniprot
Match: A0A835YTT2_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT2_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 3.350e-13
Identity = 51/176 (28.98%), Postives = 84/176 (47.73%), Query Frame = 0
Query:   19 RAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHRHRHGLGGLLPDTVDYQIKG-LTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLLTQQKG 193
            R +DVGD V+F DD G ++ ++V RIN+L+TV +RWDGQ  +  N  +A + IRN  RS    +   + V  D   E L + ++ + A  R     H      L+PD++    +     G  L V V   Q ++  +   R+   +   ++         ++  LP QP+L +  G
Sbjct:  492 RPFDVGDGVHFRDDMGQDNVFVVHRINLLSTVLKRWDGQYVVWPNRFLALREIRNMRRSGPQSNTLTVFVRRDASAEALARYRDALRAAARAAPRDHA-----LVPDSIGAAFRADAGGGTALEVCVSYTQVQSWQDANERWRTHAFLARVALTLRASLALAPDLPTQPVLLRGSG 662          
BLAST of mRNA_E_fasciculatus_S2_contig70.15154.1 vs. uniprot
Match: D7FX37_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX37_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 1.240e-12
Identity = 52/178 (29.21%), Postives = 91/178 (51.12%), Query Frame = 0
Query:   19 RAYDVGDPV--YFVDDTGGEDWYIVT--RINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHRHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLLTQQK 192
            R YDVGD V  Y   +T GE+   VT  +++++TTVF+RWD Q   + N+++A K I N  R++   H  MI V+  T  EKL  ++  +     + + +        L   + + +  + D  +L++ +  +QR N  NM +++   S+    +   C+   ISY LP  P+  ++K
Sbjct:  960 RLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAATTTPEKLTALQTSLQE-FSKSKDKPEG-----LYTRMGFSLVRIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKSACDSLNISYFLPEVPVQMKKK 1131          
BLAST of mRNA_E_fasciculatus_S2_contig70.15154.1 vs. uniprot
Match: A0A6A3B954_HIBSY (Mechanosensitive ion channel protein n=3 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3B954_HIBSY)

HSP 1 Score: 72.8 bits (177), Expect = 2.490e-11
Identity = 56/165 (33.94%), Postives = 79/165 (47.88%), Query Frame = 0
Query:   18 LRAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHRHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTL 182
            +  +DVGD      +  G    IV  +N+LTTVF R+D Q  +I N+++A KAI N +RS   L      + V TP EK+  MK  I + +    HR  H       DT+   +K L   NR+ + +    R N  +MG RF   +L  + L R  N   I Y L
Sbjct:  715 MHPFDVGDRC----EIDGVQM-IVEEMNILTTVFLRYDNQRIIIPNSVLATKAINNYYRSPDMLEIVEFCIHVKTPAEKIGLMKQRILSYIE---HRSDH----WYQDTMII-LKELEVLNRVRIAIWVTHRMNHQDMGERFTRRALLIEELVRVFNELDIKYRL 866          
BLAST of mRNA_E_fasciculatus_S2_contig70.15154.1 vs. uniprot
Match: A0A4S4D1J7_CAMSI (Mechanosensitive ion channel protein n=2 Tax=Camellia sinensis TaxID=4442 RepID=A0A4S4D1J7_CAMSI)

HSP 1 Score: 70.5 bits (171), Expect = 1.480e-10
Identity = 56/196 (28.57%), Postives = 88/196 (44.90%), Query Frame = 0
Query:   18 LRAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGL-RRGRHRHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISY-----TLPAQPLLTQQKGGEAEA-LNVREAFL 206
            +  +DVGD      +  G    +V  +N+LTTVF R+D Q  +  N+++A K I N +RS   L     ++ + TPMEK+  M+  I + +  R  H H         +     I  + D NR+ + V  + R N  +MG R+   +L  + + +      I Y     TLP  PL T      A   LN+  + L
Sbjct:  516 MHPFDVGDRC----EVDGVQM-VVEEMNILTTVFLRYDNQMIIYPNSVLATKPISNYFRSPDMLDSVEFSIHISTPMEKIASMRKSIISYIDERSDHWH---------EAPTVLITDVEDMNRVKMVVWVKHRMNFQHMGERWVRRALLVEKMIKVFRELDIEYHLANRTLPPPPLSTTSAVAPASTPLNLAVSML 697          
BLAST of mRNA_E_fasciculatus_S2_contig70.15154.1 vs. uniprot
Match: A0A6P4PGZ8_GOSAR (Mechanosensitive ion channel protein n=21 Tax=Gossypium TaxID=3633 RepID=A0A6P4PGZ8_GOSAR)

HSP 1 Score: 69.3 bits (168), Expect = 3.830e-10
Identity = 49/143 (34.27%), Postives = 71/143 (49.65%), Query Frame = 0
Query:   40 IVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHRHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTL 182
            IV  +N+LTTVF R+D Q  +I N+++A KAI N +RS   L      + V TP EK+  MK  I + +    H+  H       DT+    K L + NR+ + +    R N  +MG RF   +L  + L +  N   I Y L
Sbjct:  735 IVEEMNILTTVFLRYDNQKIIIPNSVLATKAIHNYYRSPDMLEIVEFCIHVKTPAEKIGLMKQRIMSYIE---HKSDH----WYQDTMII-FKELEELNRVRIAIWVTHRMNHQDMGERFIRRALLIEELVKIFNDLDIKYRL 869          
BLAST of mRNA_E_fasciculatus_S2_contig70.15154.1 vs. uniprot
Match: A0A835Z0M4_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M4_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 3.890e-10
Identity = 49/168 (29.17%), Postives = 78/168 (46.43%), Query Frame = 0
Query:   20 AYDVGDPVYFVD--DTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHRHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQ 185
            AYDVGD +   D   T       V +IN+LTTVF R DGQ+ ++ N ++++ A+ N  RS       ++ VS  TP+ KL  +K  +            H +G        +    + D  +L V +  Q R N  ++ RR+   +   + +A  C   GI++T P Q
Sbjct:  804 AYDVGDRLMIPDIMQTSRYHGCKVVKINLLTTVFERGDGQSLIMPNKLLSQMALINLQRSGNMWFEFVVGVSATTPLHKLHSLKGRMQKFANEDSSGIYHKIG--------FTFTEIQDSAKLVVRINVQGRFNWGDVKRRWEVHNATCQAIAHHCAELGITFTPPVQ 963          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig70.15154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMN4_ECTSI9.410e-14095.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSR3_9PHAE2.370e-12395.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YNU8_9STRA3.400e-2037.06Mechanosensitive ion channel-domain-containing pro... [more]
A0A6H5JBC1_9PHAE3.860e-1731.46EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YTT2_9STRA3.350e-1328.98EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
D7FX37_ECTSI1.240e-1229.21Small Conductance Mechanosensitive Ion channel n=1... [more]
A0A6A3B954_HIBSY2.490e-1133.94Mechanosensitive ion channel protein n=3 Tax=Hibis... [more]
A0A4S4D1J7_CAMSI1.480e-1028.57Mechanosensitive ion channel protein n=2 Tax=Camel... [more]
A0A6P4PGZ8_GOSAR3.830e-1034.27Mechanosensitive ion channel protein n=21 Tax=Goss... [more]
A0A835Z0M4_9STRA3.890e-1029.17Mechanosensitive ion channel-domain-containing pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006685Mechanosensitive ion channel MscSPFAMPF00924MS_channelcoord: 38..165
e-value: 1.2E-7
score: 31.5
NoneNo IPR availablePANTHERPTHR31323FAMILY NOT NAMEDcoord: 19..192
IPR010920LSM domain superfamilySUPERFAMILY50182Sm-like ribonucleoproteinscoord: 18..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig70contigE_fasciculatus_S2_contig70:53912..56165 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig70.15154.1mRNA_E_fasciculatus_S2_contig70.15154.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig70 53912..56165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig70.15154.1 ID=prot_E_fasciculatus_S2_contig70.15154.1|Name=mRNA_E_fasciculatus_S2_contig70.15154.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=213bp
MVSVTDLTKVWSRPPISLRAYDVGDPVYFVDDTGGEDWYIVTRINMLTTV
FRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQM
KNGIAAGLRRGRHRHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRE
NSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLLTQQKGGEAEALN
VREAFLGGETGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010920LSM_dom_sf
IPR006685MscS_channel