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Homology
BLAST of mRNA_E_fasciculatus_S2_contig70.15153.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT72_ECTSI) HSP 1 Score: 803 bits (2074), Expect = 1.010e-287 Identity = 495/592 (83.61%), Postives = 506/592 (85.47%), Query Frame = 1
Query: 1 MGSDGVQGCGGLLLRALASCLRRAGMGNPGASVENMAFGTDDPLDFSAKK-TGRGXXXXXXXXXXXXXXXXXXXXXX-GAPFVSGDYALDEELEEDXXEADQEELSAQKKKVHDLGELPALDWSNASAKLLVTVVVVGVILLTTYSGWLDERVELGRFSLREWLNGLCVSVGAYFVIELLAKAVAGFFKWTRLLHTNNKVWIFIKLHKEVSVLIWSTIIFLLWTWFEGTDLAPEDNGVIAKILGVFMAYTATNVVSEVCKVEMAHRYMWKPYLERARASIWSQYVIFMMTDHAMGLQTKDTEGQALALGFTKTKKGGEHLSLYTVGKAIGFVHANALRHPLGPGRPGTDRDGMIDSKTGARLFGGLLFDALMVHFNGEDNGKLLPVAPALGSPHSNDNR-------------RPFRFSKAFGPAAAAVQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNGNGNPTRHVRSGGKRDSGGGPXXXXXXTAAGRKGITLVHLRQMTSKPIALKKMMELFEVPPEGVVTRKEFVDRIIDIFVQRRSLQLTLGDYEAILTKVGYLLSVVSAVVIFFVALRILGYDIGSLVLTW 1731
MGSDGVQGCGGLLL ALASCLRRAG+GNPGA+VENMAFGTDDPL S KK TG G XXXXXXXXXXX GA FVSGD AL+EELE XX DQEELSAQKKKVHDLGELPALDWSN SAKLLVT+VVVGVILLTTYSGWLDERVELG FSLREWLNGLCVSVGAYFVIELLAKAVAGFFKWTRLLHTNNKVWIFIKLHKEVSVLIWSTIIFLLWTWFEG DLAPEDNGVIAKILGVF+AYTATNVVSEVCKVEMAHRYMWKPYLERARASIWSQYVIFMMTDHAMGLQTKDTEGQALALGF + ++ LSLYTVGKAIGFVHANALRHPLGPGRPGTDRDGMIDSKTGARLFG LLFDALMV FNGED LLPV PAL S S DN RPFRF KAFGPAAAAVQP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXX A GRKGITLVHLRQ+TSKPIALK MMELFEVPPEGVVTRKEFV+R +DIFVQRRSLQLTLGDYEAILTKVGYLLSVVSAVVIFFVALRILGYDIGSLVLTW
Sbjct: 1 MGSDGVQGCGGLLLGALASCLRRAGLGNPGAAVENMAFGTDDPLAISTKKATGGGVGRPRSSXXXXXXXXXXXGGSVRGASFVSGDMALEEELEXXXXXXDQEELSAQKKKVHDLGELPALDWSNTSAKLLVTIVVVGVILLTTYSGWLDERVELGHFSLREWLNGLCVSVGAYFVIELLAKAVAGFFKWTRLLHTNNKVWIFIKLHKEVSVLIWSTIIFLLWTWFEGADLAPEDNGVIAKILGVFVAYTATNVVSEVCKVEMAHRYMWKPYLERARASIWSQYVIFMMTDHAMGLQTKDTEGQALALGFHQDQER-RRLSLYTVGKAIGFVHANALRHPLGPGRPGTDRDGMIDSKTGARLFGELLFDALMVQFNGEDLSMLLPVPPALSSSRSKDNPSPTKSQAVDTDLPRPFRFCKAFGPAAAAVQPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXAVGRKGITLVHLRQITSKPIALK-MMELFEVPPEGVVTRKEFVNRTVDIFVQRRSLQLTLGDYEAILTKVGYLLSVVSAVVIFFVALRILGYDIGSLVLTW 589
BLAST of mRNA_E_fasciculatus_S2_contig70.15153.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR3_9PHAE) HSP 1 Score: 819 bits (2115), Expect = 2.560e-287 Identity = 501/660 (75.91%), Postives = 520/660 (78.79%), Query Frame = 1
Query: 1 MGSDGVQGCGGLLLRALASCLRRAGMGNPGASVENMAFGTDDPLDFSAKKTGRGXXXXXXXXXXXXXXXXXXXXXXGAPFVSGDYALDEELEEDXXEADQEELSAQKKKVHDLGELPALDWSNASAKLLVTVVVVGVILLTTYSGWLDERVELGRFSLREWLNGLCVSVGAYFVIELLAKAVAGFFKWTRLLHTNNKVWIFIKLHKEVSVLIWSTIIFLLWTWFEGTDLAPEDNGVIAKILGVFMAYTATNVVSEVCKVEMAHRYMWKPYLERARASIWSQYVIFMMTDHAMGLQTKDTEGQALALGFTKTKKGGEHLSLYTVGKAIGFVHANALRHPLGPGRPGTDRDGMIDSKTGARLFGGLLFDALMVHFNGEDNGKLLPVAPALGSPHSNDNRRP-------------FRFSKAFGPAAAAVQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------SNGNGNPT------------------------------------RHVRSGGKRDS-GGGPXXXXXXTAAGRKGITLVHLRQMTSKPIALKKMMELFEVPPEGVVTRKEFVDRIIDIFVQRRSLQLTLGDYEAILTKVGYLLSVVSAVVIFFVALRILGYDIGSLVLTW 1731
+GSDGVQGCGGLLL ALASCLRRAG+GNPGA+VE+MAFGT+DPL S KK G XXXXXXXXXXXX GA FVSG+ L+EELEED EADQEELSAQKKKVHDLGELPALDWSN SAKLLVT+VVVGVILLTTYSGWLD+RVELG FSLREWLNGLCVSVGAYFVIELLAKAVAGFFKWTRLLHTNNKVWIFIKLHKEVS+LIWSTII+LLWTWFEGTDLAPEDNGVIAKILGVF+AYTATNVVSEVCKVEMAHRYMWKPYLERARASIWSQYVIFMMTDHAMGLQTKDTEGQALALGFTKTK G EHLSLYTVGKAIGFVHANALRHPLGPGRPGTDRDGMIDSKTGARLFG LLFDALMV FNGED KLLPV PAL S FRF+K FGPAAAAVQP XXXXXXXXXXXXXXXXXXXXXXXXXX +N +G+ + RHVRSGGKRDS G XXXXXX AGRKGITLVHLRQMTSKPIALK MMELFEVPPEGVVTRKEFVDR +DIFVQRRSLQLTLGDYEAIL KVGYLLSVVSAVV+FFVALRILGYDIGSLVLTW
Sbjct: 150 LGSDGVQGCGGLLLGALASCLRRAGLGNPGAAVEHMAFGTEDPLAISTKKAAGGGVGRPRSGSXXXXXXXXXXXXDGASFVSGETVLEEELEEDDDEADQEELSAQKKKVHDLGELPALDWSNTSAKLLVTIVVVGVILLTTYSGWLDKRVELGHFSLREWLNGLCVSVGAYFVIELLAKAVAGFFKWTRLLHTNNKVWIFIKLHKEVSLLIWSTIIYLLWTWFEGTDLAPEDNGVIAKILGVFLAYTATNVVSEVCKVEMAHRYMWKPYLERARASIWSQYVIFMMTDHAMGLQTKDTEGQALALGFTKTKNGDEHLSLYTVGKAIGFVHANALRHPLGPGRPGTDRDGMIDSKTGARLFGELLFDALMVQFNGEDLNKLLPVPPALSSSRXXXXXXXXXXXXXXXXXXXXFRFNKTFGPAAAAVQPAADDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGPRKLSCVPEEDEEQKEEGTGSDDTNADGSTSTETNVSHWSPGAEEPASQSAVAGDGTGAEAGVGAKARHVRSGGKRDSVGXXXXXXXXXXXAGRKGITLVHLRQMTSKPIALK-MMELFEVPPEGVVTRKEFVDRTVDIFVQRRSLQLTLGDYEAILKKVGYLLSVVSAVVVFFVALRILGYDIGSLVLTW 808
BLAST of mRNA_E_fasciculatus_S2_contig70.15153.1 vs.
Match: Mechanosensitive (ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU8_9STRA) HSP 1 Score: 137 bits (344), Expect = 4.600e-30 Identity = 83/289 (28.72%), Postives = 161/289 (55.71%), Query Frame = 1
Query: 271 LEEDXXEADQEELSAQKKKVHDLGELPALDWSNASAKLLVTVVVVGVILLTTYSGWLDERVELGRFSLRE-----WLNGLCVSVGAYFVIELLAKAVAGFFKWTRLLHTNNKVWIFIKLHKEVSVLIWSTIIFLLWTW----FEGTDLAPEDNGVIAKILGVFMAYTATNVVSEVCKVEMAHRYMWKPYLERARASIWSQYVIFMMTDHAMGLQTKDTEGQALALGFTKTKKGGEHLSLYTVGKAIGFVHANALRHPLGPGRPGTDRDGMIDSKTGARLFGGLLFDALM 1110
LE D + +++ ++ LGELP + A+ LV +++ + + G + E+V G +R W + ++V +Y + K + +R +H+N+ V+ F++LH + L+W+ I+L W + ++ ++ + + ++L +M +++++ +E+A+RYMW+PYLER +A+I++QYVI ++TD+++G D + Q +AL F++ + + +S+Y + +A+GF+ N LRHP+ G G+ +DSK AR+F GLLFD L+
Sbjct: 279 LEPDAEDEPEDDEDSENAVFEHLGELPMMTLRK-EARFLVKYLLIALAIFAP--GAIIEKVH-GCILVRGQCLFVWASLAGMAVASYPFTAMAIKTLVMVLCNSRFIHSNH-VYFFVRLHYASAQLMWAVFIYLFWKYGLAEYKSPNMQESTDRAVGRVLACYMVSRIVYLLNKMSLLELANRYMWRPYLERVQANIFAQYVILILTDYSLGYVRNDQD-QYIALQFSENQGNWDKMSMYAISRAMGFIPKNKLRHPVFAGSAGSVA---MDSKRSARMFAGLLFDRLV 558
BLAST of mRNA_E_fasciculatus_S2_contig70.15153.1 vs.
Match: EF-hand (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT2_9STRA) HSP 1 Score: 118 bits (296), Expect = 2.690e-24 Identity = 114/459 (24.84%), Postives = 178/459 (38.78%), Query Frame = 1
Query: 481 WLNGLCVSVGAYFVIELLAKAVAGFFKWTRLLHTNNKVWIFIKLHKEVSVLIWSTIIFLLWTWFEGTDLAPEDNGVIA--KILGVFMAYTATNVVSEVCKVEMAHRYMWKPYLERARASIWSQYVIFMMTDHAMGLQTKDTEGQALALGFTKTKKGGEHLSLYTVGKAIGFVHANALRHPLGPGRPGTDRDGMIDSKTGARLFGGLLFDALMVHFNGEDNGKLLPVAPALGSPHSNDNRRPFRFSKAFGPAAAAVQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNGNGNPTRHVRSGGKRDSG---------------------------------------GGPXXXXXXTAAGRKGI-TLVHLRQMTSKPIALKKMMELFEVPPEGVVTRKEFVDRIIDIFVQRRSLQLTLGDYEAILTKVGYLLSVVSAVVIFFVALRILGYDIGSLVLTW 1731
W V+V AY ++L +A TRL+H + V+ ++L + V+ +W+ ++FLLW + G A ++L +A+ +V + E+AHR +W PYL R +ASI++QYVI M+++ AM + QA+AL + + ++SLY + +A+ FV + L I SK AR F +LF +++ G A P G + R+ G SG G AA G+ TL LR KP+A +K +EL + + +T EFV I+ ++ +RRSL L+L DYE IL K+ Y+LSV AV + FV L I G + L ++W
Sbjct: 35 WAVAAFVAVAAYPSLQLAVRAAGAAIARTRLVHVTH-VYFALRLARRVAAFLWALLLFLLWQRLVAPRVRGLGGGGSAFERLLACHLAFRTIWLVKDFVVQEVAHRTLWAPYLARVQASIFAQYVIMMLSEFAMDGRRCGAVDQAVALQYAANEANWHNMSLYAISQAMSFVPSQRLSGAAA-----------IQSKRTAREFAAVLFRSVIAQCARPRKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERAPPTPPLAQWQVVRGLLRV-----------------DGSGGGTVKSARTSGDVGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRASGTDVPSGDAAAALAGVLTLRSLRPAMCKPLA-RKTLELLDANADATITEDEFVSAIVRVYQKRRSLSLSLQDYEIILRKLSYMLSVGFAVFLLFVCLWIFGQGVVGLGVSW 463
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig70.15153.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4
| Match Name | E-value | Identity | Description | |
| Uncharacterized | 1.010e-287 | 83.61 | protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... | [more] |
| Uncharacterized | 2.560e-287 | 75.91 | protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... | [more] |
| Mechanosensitive | 4.600e-30 | 28.72 | ion channel-domain-containing protein n=1 Tax=Trib... | [more] |
| EF-hand | 2.690e-24 | 24.84 | domain-containing protein n=1 Tax=Tribonema minus ... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 0 |
| Start | 1 |
| Seed ortholog score | 77.8 |
| Seed ortholog evalue | 1.8e-11 |
| Seed eggNOG ortholog | 2880.D7FX37 |
| Model size | 1731 |
| KEGG ko | ko:K02575,ko:K22048 |
| KEGG TC | 1.A.23.4,2.A.1.8 |
| KEGG Pathway | ko00910,map00910 |
| KEGG Module | M00615 |
| Hectar predicted targeting category | other localisation |
| Exons | 12 |
| EggNOG free text desc. | mechanosensitive ion channel activity |
| EggNOG OGs | COG0668@1,KOG4629@2759 |
| Cds size | 1731 |
| COG Functional cat. | M |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko02000 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1696842359.520417-CDS-E_fasciculatus_S2_contig70:46168..46486 | 1696842359.520417-CDS-E_fasciculatus_S2_contig70:46168..46486 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig70 46169..46486 + |
| 1696842359.536235-CDS-E_fasciculatus_S2_contig70:46844..47066 | 1696842359.536235-CDS-E_fasciculatus_S2_contig70:46844..47066 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig70 46845..47066 + |
| 1696842359.5458257-CDS-E_fasciculatus_S2_contig70:47550..47660 | 1696842359.5458257-CDS-E_fasciculatus_S2_contig70:47550..47660 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig70 47551..47660 + |
| 1696842359.555307-CDS-E_fasciculatus_S2_contig70:48449..48542 | 1696842359.555307-CDS-E_fasciculatus_S2_contig70:48449..48542 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig70 48450..48542 + |
| 1696842359.5668554-CDS-E_fasciculatus_S2_contig70:48957..49090 | 1696842359.5668554-CDS-E_fasciculatus_S2_contig70:48957..49090 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig70 48958..49090 + |
| 1696842359.576604-CDS-E_fasciculatus_S2_contig70:49696..49771 | 1696842359.576604-CDS-E_fasciculatus_S2_contig70:49696..49771 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig70 49697..49771 + |
| 1696842359.5893798-CDS-E_fasciculatus_S2_contig70:50114..50230 | 1696842359.5893798-CDS-E_fasciculatus_S2_contig70:50114..50230 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig70 50115..50230 + |
| 1696842359.6087425-CDS-E_fasciculatus_S2_contig70:50635..50761 | 1696842359.6087425-CDS-E_fasciculatus_S2_contig70:50635..50761 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig70 50636..50761 + |
| 1696842359.6211267-CDS-E_fasciculatus_S2_contig70:51145..51311 | 1696842359.6211267-CDS-E_fasciculatus_S2_contig70:51145..51311 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig70 51146..51311 + |
| 1696842359.6320715-CDS-E_fasciculatus_S2_contig70:51799..51937 | 1696842359.6320715-CDS-E_fasciculatus_S2_contig70:51799..51937 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig70 51800..51937 + |
| 1696842359.6463764-CDS-E_fasciculatus_S2_contig70:52322..52445 | 1696842359.6463764-CDS-E_fasciculatus_S2_contig70:52322..52445 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig70 52323..52445 + |
| 1696842359.6653163-CDS-E_fasciculatus_S2_contig70:52728..52839 | 1696842359.6653163-CDS-E_fasciculatus_S2_contig70:52728..52839 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig70 52729..52839 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig70.15153.1 >prot_E_fasciculatus_S2_contig70.15153.1 ID=prot_E_fasciculatus_S2_contig70.15153.1|Name=mRNA_E_fasciculatus_S2_contig70.15153.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=577bp
MGSDGVQGCGGLLLRALASCLRRAGMGNPGASVENMAFGTDDPLDFSAKK TGRGGGGGRPRSASGAAAGGGRGGSGGAPFVSGDYALDEELEEDDDEADQ EELSAQKKKVHDLGELPALDWSNASAKLLVTVVVVGVILLTTYSGWLDER VELGRFSLREWLNGLCVSVGAYFVIELLAKAVAGFFKWTRLLHTNNKVWI FIKLHKEVSVLIWSTIIFLLWTWFEGTDLAPEDNGVIAKILGVFMAYTAT NVVSEVCKVEMAHRYMWKPYLERARASIWSQYVIFMMTDHAMGLQTKDTE GQALALGFTKTKKGGEHLSLYTVGKAIGFVHANALRHPLGPGRPGTDRDG MIDSKTGARLFGGLLFDALMVHFNGEDNGKLLPVAPALGSPHSNDNRRPF RFSKAFGPAAAAVQPAADEDDDNNNNNNNNGDNNGNSNNNNSRHHHSNGN GNPTRHVRSGGKRDSGGGPGGSAGGTAAGRKGITLVHLRQMTSKPIALKK MMELFEVPPEGVVTRKEFVDRIIDIFVQRRSLQLTLGDYEAILTKVGYLL SVVSAVVIFFVALRILGYDIGSLVLTW back to topmRNA from alignment at E_fasciculatus_S2_contig70:46169..52839+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig70.15153.1 ID=mRNA_E_fasciculatus_S2_contig70.15153.1|Name=mRNA_E_fasciculatus_S2_contig70.15153.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6671bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig70:46169..52839+ (Ectocarpus fasciculatus EfasUO2) ATGGGCAGCGACGGCGTCCAGGGGTGCGGCGGCCTCCTCCTGCGCGCGCT
GGCGTCATGCCTCCGCCGGGCGGGAATGGGAAACCCAGGCGCCTCGGTCG
AGAACATGGCGTTCGGCACCGACGACCCCCTCGACTTTTCGGCCAAGAAG
ACCGGCCGCGGCGGCGGCGGCGGTAGGCCAAGGTCTGCCAGCGGGGCGGC
GGCAGGGGGGGGGAGGGGGGGGTCCGGCGGAGCCCCCTTCGTGTCCGGGG
ACTACGCGTTGGACGAGGAGCTGGAGGAGGATGATGACGAGGCCGACCAG
GAGGAGCTGTCCGCTCAGGTGCGTGTGGTAAACGAAACCAGCCCTATCGG
AGAGAAGAAGGTGGACGTGACCTCGACTGCTCGAAATGTCACACCAACAA
TCATGGCTGTTACCCCTGCGCGTGACACAGGGAGCAGTATAGTCAATGTT
TTTTTCTCGCACACCCATTATTTTTTTTCTGTAAAAAAACGCGCGTGTCA
TTGTCTTCGCATCGAAGCCGTCCCCGTCTCTTGTGCAAAGTGCTCAATTG
TTACACGAAGTCCGTGCTCTATTTTTTCACGTTCCACAGCGTCGGTCCGT
GCTCTTCCACCAACACGCACGCAATGAACAATGACAACACTATTCTTACC
ACGTGCCGTGTTCTCCAACCACGCAGAAGAAGAAGGTACACGACCTCGGA
GAGCTGCCCGCCCTCGACTGGTCCAACGCCTCCGCCAAGCTGCTGGTGAC
CGTCGTCGTGGTAGGGGTGATCCTTCTCACCACCTACTCCGGGTGGCTGG
ACGAGCGCGTGGAGCTGGGTCGCTTCTCGCTGAGGGAGTGGCTGAACGGC
CTGTGCGTGTCCGTCGGCGCGTACTTCGTGATCGAGCTCCTAGCGAAGGT
ATACTACGTTCGCCGCTCGTGGTCGCTAGTGGTTTGTCACGTGTGCTTAC
GGGTGTGTTGGCTTGTTTTTTTGTGTTTTATGTTCGTGTGTCGTAGTGGT
TCTTAATGTGCTGCTGGTGCTTCTGCTATCCTAGCGGGGGCTGTGTCGTG
GTGTTCGTGACTCTTGGCGTGTTGCTACCTCGCTTGCTCTTGGTCGTGCC
GCTGCTGTGTGCGTGCTTCTCCTTTCGGTTGAGTATCTCTCCTCCTTTTT
CATTCGCGTACTTCGCAGTTGTCACCCCCGCTGCAAGATTGCATCTCTGT
ATTCTAGCCATCAAACGCAGCGGTCCAAAATGGTACAACACTTCTATCAC
TACATCATCAACTGCTGTCAATGTTGTGCATGCAGCTCTTGGTCGGGCGT
GTGCCTTGAAGGGGATGTGAAAAGTTTTCGCTGTTGCTGTGGCGTTTTTT
TTTTCCTCCGCTCCTTTTTCGCGCACCACCAGGCGGTGGCGGGCTTCTTC
AAGTGGACCCGGCTCCTGCACACCAACAACAAGGTCTGGATCTTCATCAA
GCTGCACAAGGAGGTGTCGGTGCTAATCTGGAGCACCATCATGTACGAGG
CGTGTTTGTTCGTGTGTTTGCCCATCCCACCACTTACGGTTTCGTAGGCA
TGGCGTTAACGTGCTCCTGTAGCTTTGTCCTGCCCGTCATCCTCACGCTC
TTGACCGGAAACCGCAGCTGGCGGCTGTCTGTGGCATCGTCACTAGCAAC
AGAACGCATGTTTCAGCAGAGCTGGCCACTCGGTCGAGCATAGCGCTCGC
GCCGTCGTGTGTATGTATGTATGCGGCCGCCTGTTGCACCTGCCACAAGC
AAATTCCATATCGGTAATTTTTGTGCTGTTGGCTCTGTGCGATGCTGTCA
TCATTGTTTGCACATTGCGTTACAATTCGGCGTGTACAACGCCCTCCCGC
ACACGGTCAACACACGTGTCGTCCTGTGTTAGGGGCTTGCGTCGACGTTT
TCGCCGTCTCGGTGCTTAGCTTAGCCTGGTTGTGCGTTTTTGTCCCCCTC
CAAATCTGACGATATCAAGTGTGTTTCGGATGGGCTGCAAGATCGACGGT
GTGTAGGTCAACGGCCGTTGCGACCATGAAGTAAGGCGCAGGCTTTCCCC
CACGTGTTCCCTGTGCGCGGCCGGGCGGCGAGTCGACTCTGAACCCAAAG
CCAGTGTGTTCGGCGAAATCGTTTTTCACTGTCCGGAACATGTTTTCTTT
CGCACCCGCGTCGTGCAGTACCGTGAGCAAAATGTTCGGCGCGCTATTCA
GTTGGACTAATTCACAAAGCAACGTTGCGCATCGTTTGACTGTCGTGCTG
TTGTACGCCGTGATGTGACGCGGTGAAACAGATTTCTCCTGTGGACTTGG
TTTGAGGGCACTGACTTGGCGCCCGAGGACAACGGAGTGATCGCCAAGAT
ACTCGGCGTTTTCATGGCCTACACGTAAGGAATTTCGTGGTGTGTGTGTA
GTAGTAGTAGTGCACAAGGCTGTGGTTTTCGGCCCCCTTCGATAGGACTA
CTCGTCTTGTTGTCATTGTCGTTGTCTTGTTGTTGACTATGTCAGGATAC
TTTTTCGTTGCTCGCGCTGTTGTCTGTGTGTCGTCGTTTCTTTTCGTTGT
TGTTGTTGTTGTTGGTCGTGGTGGTGGCAGTAGTGATGCTCTTTTGCCGG
GCTCTTTCTTGCTCGTGAAGTGACTTTCGGCAGTTGGTCGCGTCGCCGTC
TATCTTGTTTGTTGCGTCCCCCTTCGTCTACACTGTCTCCTCCTCGCTGC
CCGCTCTTTTTGAAGTGACCCCCTTCCCTACACGTGTATGCCTCCTACGT
GTTCCGGTCTCCCCCCCTTCTCCTCCCCGGCGGGCGCAGCGCTACCAACG
TCGTGAGCGAGGTGTGCAAGGTGGAGATGGCCCACCGGTACATGTGGAAA
CCCTACCTCGAGCGGGCCCGCGCCAGCATCTGGTCCCAGTACGTCATCTT
CATGATGACCGATCACGCCATGGTGAGCGACACGTTTGCTGTAGCGCAGC
CGTTAGGAGGAGCACAAGTAGTCACACCACAAGACAATCGGCGCGGCGCA
AGCGGAGCGTAGTCAGTCCTATATAACCGTTGCTCAAGTTCTCGCGGTTG
CATGGATGGTGGGGTGCCGGACGAGAGTGGCAATTTGGTCCGGAGGGGCT
TAAGGTGGTGTGCGGGATCGGCAGGCGAGGGGGGAAACGGGGACCTTCGA
TGTACAAGTAGGTCGATCATGTACGCTACGCCGTTCGGAGAGCGAGATTC
AGAGAGACAGACAGACAGACAGGCCGACCGGCACACACAGAGAGAGAGAG
AGAGCTGTGATTTTGTCCCCGAGAAACTAAACCGCACACGGATCGTCGAC
GACGGAGTATGCGCACCGCTGACCCACACATACGCACGGGTACCATGGAC
GGTGCGTGGTGCAGCGTGAAAGGTGATGAGGCCTCCGATCCCTCACCCCC
CGCACGCCTCGTGAGCTCCCCGTTTTTATTAACGTAGATTGGTGGTATTG
TACCCCCGTCACCGCGGCTGCCACTAACGGTGACCTGTGCTTTTCGTCCG
CGCCGCCGGCATCTGTCCCGCGTTCCAGGGGCTGCAAACGAAGGACACGG
AAGGGCAGGCGCTAGCCCTAGGCTTCACCAAGACCAAGAAAGGCGGGGAG
CATGTGAGTCAGTCCGCGCGGCGCGCAGGGGGGGGGGGGAGGGGAGGGCG
TCGTCATCAGGCCCGGCGGAATGAGCGACAGTTGGCGTTATTCGCGGAGG
TCCCTTTGTCCCGGTTTGACTTGGCATGATGAGTGCTTGGCGTAGGTGAC
CCTCCGACCTCTTCATTTTTTTCATGCCTGTATGTAGCGCTGCGCCGTGC
GTTTGAAGGGAAAGTACTTGGATGAGTTTGTTTTTTTTTTCGCGGCGACG
TACGTCCGCGCGACGCCACTCTCGCTCGTCCTGTTTTTTTTGGCTCACTC
CACGTGCATTGTTCTTCTTGTCTCTTGGTACTGCTGTATCATGCAGCTAT
CGCTATATACGGTCGGCAAGGCGATCGGGTTCGTCCACGCCAACGCGCTC
AGGCACCCGCTGGGCCCGGGGAGACCGGGCACTGACCGTGACGGCATGAT
CGACAGCAAGACGTGAGTAGCGTGTCTTGCTGTGGTCGTTATGTTACCGA
GAAAAAGGGACGACGTCAATCTCTTCATCAAGGGCGCATTCACGTGTGTT
CTTGTGTATCTTCGATGCCGAGAAACCAACACGACTCTGGGTCAACGTAA
TTTCGAACCGCCTTGCGTGACTTTTTTTCCTCGATGCACCGGTGTGCTCC
CGTCTGCAACAAGAAGCGTTGTGCAGCGAGCTTCCTTCTCCTGCATTTTT
TTTCCCCGACCCTTTTACGGGAAGTATTGACCGGAGGATGACGTCTTCAC
TTTGCGTTTGACGCATTCCTCCCTGCCTCTGTCTGATGCATGTATTTTTT
CGTCGTGCGTACGACTTCTTGTTCGTGTGCTGTTTCTTTTGCGGGTGGGT
ACGAACGTACCGTACAGCGGTGCTCGTCTGTTCGGCGGGCTGCTGTTCGA
CGCCCTGATGGTCCACTTCAACGGGGAGGACAATGGCAAGCTCCTGCCCG
TCGCGCCCGCTCTTGGCAGCCCCCACAGCAACGACAACCGCAGGTAAGAA
GGCGCCGAGTTTTTTTCTTGAAACCGTTATTCACCAAGCGTACCAGCTTG
CCTTCGGTGTCGCACGCAGGCGTACGCCTTCTTTACGCCTTACGCGCTTC
CTTTTTGGAGGATCAGAGTTCCCTCGCTGACCATCCCCCCCTATGTGCTT
ACCCGGTCGCCGTCTTCCACCTCTACTCCCCCGTCCACGGTGAACACATG
CAACAAGTCTCGTCCATGTTTGCTGCTGGTCTCAGTCACGTCCCTTGCTA
CCTTTATCTCCGTTCCCTCGATGATGAGGTCTTGCCTTCGTGACCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCC
CCACCCCTCCCACCCCACCCCCCCCAGACCCTTCCGCTTCAGCAAAGCCT
TCGGGCCCGCCGCCGCGGCTGTGCAGCCGGCCGCTGATGAGGACGACGAC
AACAACAACAACAACAACAACAACGGCGACAACAACGGCAACAGCAACAA
CAACAACAGTCGCCACCACCACAGCAACGGCAATGGCAACCCGGTGAGCT
AACAATCGCATGCCTTTTGTGCGTCGCGGTGTTGTGATTGAACGCAGTCG
CCGCCGCCGCCGCCGCCGCCGGAACGTGGTAATATGCTGATTTGGATTTG
CTTGCAGGGTAAGTTGGTGGTCATCACGCTTACAAGAACTCTCTACCCCC
TTCCCTCCCCCCGGCTCTTTCTCTCCGTCGCCCCCCGTCTGTTGGTGTGC
GTTTTTGCATTGCTCCCCCGCCGTGATGGACATGTCGAAAAACAACCACG
ATGGGCCACCACCAATAGAAGATGTTCGGGCCCAGGACGCTCAGCTGCGT
CCCTGAGGAAGACGAAGATCAGAAGGAGGACGAGGAGGAGGAGGGAACGG
GAAGCGACGACACTGATGGGAGCGCGTCCACGGAGATGAACGACCCGCAC
TGGCCGCCCGGTTCGGACGAACCCGCTTTCTCCCGGTCTGCCGCGGCCGG
CGGGGGCACTGGAACAGCGATTGGAGCGAAGACGAGGCACGTGAGGTCGG
GTGGCAAACGCGACTCGGGCGGCGGGCCCGGTGGCTCCGCGGGGGGGACG
GCGGCAGGGCGCAAGGGGATCACGCTGGTGCACCTGCGGCAGATGACGAG
CAAGCCGATCGCGCTCAAGGTAAATATTTGACCGCTGCGGCCGTCTCTGT
GATGCTCCTCCACTTCCTTGTGTTGGTAGGGGAGGGGAGGGCGTACTCTT
ATATTTTGCATGCCTTTGCGGTTAGACCACCGACCACGCGTCCTCGAGAG
GTAGGGGAGGGGGGAGGGGGGGGGGGCTCTATGTTATTGTCTGTCCGAAG
CTACGTACCCGTGGAACCGTCCATGACTCCCTCCCGTCACAGCTGCACCT
CAGCGATAAGCTTCACCAGCAGCAGTAGTGGTAGCGATCAAAATTGATAT
ACTCTGTGATGGGAGGCGGTTGTACCTTTTTTCGGCGGACACGTCGTATC
GTCAGAGCCAAGCAACACCTCCCTCCATCTGCTCCCGTGGCTGTCTGTAC
GGAGAAGATGATGGAGCTTTTTGAGGTGCCTCCGGAGGGCGTGGTGACGA
GGAAGGAGTTCGTGGATCGCATAATCGACATCTTCGTACAGCGCCGGAGC
CTGCAGCTCACTCTCGGCGACTACGAGGTGTGCGTGCTTGAAAAACAATT
TGTGGCGTGGAATGCGCAATCTAGAACCCACCAGCTACGAACGAGTATGG
GATATCTATGTAGCACACAATCTAGCACACACCATATTTATACCCTTGGC
AACAATACGACGAATGGGCATGGCAATGACACTTCTTGTTCCTCTGTGTA
TTACCCTCCCCTCTTACCACACCTTCCCTGTTGTTAACCGTGTGCGATAC
CTTGCCCGCCCGCCTGCTGGCACCGCTGCACGCACAACCTACATGTATAC
ATGTATACAGGCGATCCTGACGAAGGTGGGCTACCTCCTCTCGGTGGTGT
CTGCCGTGGTCATCTTCTTCGTCGCACTCCGCATCCTCGGATACGACATC
GGCAGCCTTGTGCTCACTTGG back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig70:46169..52839+ >mRNA_E_fasciculatus_S2_contig70.15153.1 ID=mRNA_E_fasciculatus_S2_contig70.15153.1|Name=mRNA_E_fasciculatus_S2_contig70.15153.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1731bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig70:46169..52839+ (Ectocarpus fasciculatus EfasUO2) ATGGGCAGCGACGGCGTCCAGGGGTGCGGCGGCCTCCTCCTGCGCGCGCT GGCGTCATGCCTCCGCCGGGCGGGAATGGGAAACCCAGGCGCCTCGGTCG AGAACATGGCGTTCGGCACCGACGACCCCCTCGACTTTTCGGCCAAGAAG ACCGGCCGCGGCGGCGGCGGCGGTAGGCCAAGGTCTGCCAGCGGGGCGGC GGCAGGGGGGGGGAGGGGGGGGTCCGGCGGAGCCCCCTTCGTGTCCGGGG ACTACGCGTTGGACGAGGAGCTGGAGGAGGATGATGACGAGGCCGACCAG GAGGAGCTGTCCGCTCAGAAGAAGAAGGTACACGACCTCGGAGAGCTGCC CGCCCTCGACTGGTCCAACGCCTCCGCCAAGCTGCTGGTGACCGTCGTCG TGGTAGGGGTGATCCTTCTCACCACCTACTCCGGGTGGCTGGACGAGCGC GTGGAGCTGGGTCGCTTCTCGCTGAGGGAGTGGCTGAACGGCCTGTGCGT GTCCGTCGGCGCGTACTTCGTGATCGAGCTCCTAGCGAAGGCGGTGGCGG GCTTCTTCAAGTGGACCCGGCTCCTGCACACCAACAACAAGGTCTGGATC TTCATCAAGCTGCACAAGGAGGTGTCGGTGCTAATCTGGAGCACCATCAT ATTTCTCCTGTGGACTTGGTTTGAGGGCACTGACTTGGCGCCCGAGGACA ACGGAGTGATCGCCAAGATACTCGGCGTTTTCATGGCCTACACCGCTACC AACGTCGTGAGCGAGGTGTGCAAGGTGGAGATGGCCCACCGGTACATGTG GAAACCCTACCTCGAGCGGGCCCGCGCCAGCATCTGGTCCCAGTACGTCA TCTTCATGATGACCGATCACGCCATGGGGCTGCAAACGAAGGACACGGAA GGGCAGGCGCTAGCCCTAGGCTTCACCAAGACCAAGAAAGGCGGGGAGCA TCTATCGCTATATACGGTCGGCAAGGCGATCGGGTTCGTCCACGCCAACG CGCTCAGGCACCCGCTGGGCCCGGGGAGACCGGGCACTGACCGTGACGGC ATGATCGACAGCAAGACCGGTGCTCGTCTGTTCGGCGGGCTGCTGTTCGA CGCCCTGATGGTCCACTTCAACGGGGAGGACAATGGCAAGCTCCTGCCCG TCGCGCCCGCTCTTGGCAGCCCCCACAGCAACGACAACCGCAGACCCTTC CGCTTCAGCAAAGCCTTCGGGCCCGCCGCCGCGGCTGTGCAGCCGGCCGC TGATGAGGACGACGACAACAACAACAACAACAACAACAACGGCGACAACA ACGGCAACAGCAACAACAACAACAGTCGCCACCACCACAGCAACGGCAAT GGCAACCCGACGAGGCACGTGAGGTCGGGTGGCAAACGCGACTCGGGCGG CGGGCCCGGTGGCTCCGCGGGGGGGACGGCGGCAGGGCGCAAGGGGATCA CGCTGGTGCACCTGCGGCAGATGACGAGCAAGCCGATCGCGCTCAAGAAG ATGATGGAGCTTTTTGAGGTGCCTCCGGAGGGCGTGGTGACGAGGAAGGA GTTCGTGGATCGCATAATCGACATCTTCGTACAGCGCCGGAGCCTGCAGC TCACTCTCGGCGACTACGAGGCGATCCTGACGAAGGTGGGCTACCTCCTC TCGGTGGTGTCTGCCGTGGTCATCTTCTTCGTCGCACTCCGCATCCTCGG ATACGACATCGGCAGCCTTGTGCTCACTTGG back to top
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