mRNA_E_fasciculatus_S2_contig70.15151.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig70.15151.1
Unique NamemRNA_E_fasciculatus_S2_contig70.15151.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig70.15151.1 vs.
Match: UBX (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT74_ECTSI)

HSP 1 Score: 738 bits (1906), Expect = 7.330e-260
Identity = 435/521 (83.49%), Postives = 443/521 (85.03%), Query Frame = 2
Query:   71 MADFLNLDSRGNKLKKEQQKRRDAARLRIQRERRSKEAAAKDQARIXXXXXXXXXXXXXXXXXXXXXXXXDQIRTAGISYKESLLAVTADGEGDKILLPPSALESLSRQDAVGLGPMLFELTCTTSGAAPTGQQQSEKTPALQGGTMTTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQMPSRTSDESNVANDDPENAKAERPPVEGLENVVVRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMRNHATLTVGDHLSVWRRGKEFSVK-------------------VVELRPEPQVTVIDTDMEIELDLPEKAREQLQEKGAQDRAKTLRAHMGAATTSSRGSSPTQSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXGLSPMDXXXXXXXXXXXXXXXXXXXGGAKKRAFDLEKHRLAKFQQLPEEPPRDEEGVFTCQLRTTEGKVTRRFRFADALGVLLDFCESQGGVPGHYRLVVPFPRRVLTRDDASAGTTLREAGLTSKQESVILERI 1576
            MADFLNLDSRGNKLKKEQQKRRDAARLRIQRERRSKEAAAKDQARIXXXXXXXXXXXXXXXXXXXXXXXXDQIRTAGISYKESLLAVTADGEGDKILLPPSALE LSRQDAVGLGPMLFELTCTTSGAAPT QQQ EK PALQGGT+TTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQ+PSRTSDE+  ANDDPENAKAERP VEGLENVVVRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMRNHATLTVGDHLSVWRRGKEFS+K                   VVELRPEPQVTVIDTDMEIELDLPEKAREQLQEKGAQDRAKTLRAHMGAAT SSRGSSPTQS+S                           GLSPMD                   GG KK AFDLEKHRLAKFQQLPEEPPRDEEGVFTCQLRTTEGK TRRFRFADALGVLLDFCE+QGGVPG YRLV+PFPRRVLTRDDASAGTTL EAGLTSKQESVILER+
Sbjct:    1 MADFLNLDSRGNKLKKEQQKRRDAARLRIQRERRSKEAAAKDQARIXXXXXXXXXXXXXXXXXXXXXXXXDQIRTAGISYKESLLAVTADGEGDKILLPPSALECLSRQDAVGLGPMLFELTCTTSGAAPTSQQQPEKAPALQGGTITTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQVPSRTSDENISANDDPENAKAERPAVEGLENVVVRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMRNHATLTVGDHLSVWRRGKEFSLKSEDSHSPLTPEREPPLTMQVVELRPEPQVTVIDTDMEIELDLPEKAREQLQEKGAQDRAKTLRAHMGAATISSRGSSPTQSLSPPPSGRGYAVGGKGSSVAAGGRDTSTTGLSPMDDSESDDDSDLDSDDERSTPGGPKKGAFDLEKHRLAKFQQLPEEPPRDEEGVFTCQLRTTEGKFTRRFRFADALGVLLDFCEAQGGVPGQYRLVMPFPRRVLTRDDASAGTTLHEAGLTSKQESVILERL 521          
BLAST of mRNA_E_fasciculatus_S2_contig70.15151.1 vs.
Match: UBX (domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CT31_9STRA)

HSP 1 Score: 167 bits (422), Expect = 4.860e-41
Identity = 107/242 (44.21%), Postives = 144/242 (59.50%), Query Frame = 2
Query:  293 TAGISYKESLLAVTADGEGDKILLPPSALESLSRQDAVGLGPMLFELTCTTSGAAPTGQQQSEKTPALQGGTMTTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQMPSRTSDESN------VANDDPENAKAERPPVEGLE-NVVVRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMRNHATLTVGDHLSVWRRGKEFSVKVVELRPEPQVTVIDTDMEIELDLPEKAREQLQE 997
            TAGI+Y   L   T  GEGDKI+LPPSALE+L++QDA+ LGPMLF+L+       P    +S++ PA         R THAGVLEF A++G IGLP KV  SL+       P  T ++ +      V     E   +   P  G    V V+YVRL K T+A+V P T  L  V EL+ MLE N++NHATL+ GD L VW RG+ F ++V  L P   VTVIDTD+ +++++PE+  E+ +E
Sbjct:   71 TAGITYSCDLWPYTVSGEGDKIILPPSALETLTQQDALALGPMLFQLSLL-----PAEGNKSKQLPAGA-------RVTHAGVLEFSAEDGRIGLPLKVRKSLVAE-----PEETREDGSRGMKERVEGPGGEEGDSRASPAWGSGWKVRVKYVRLEKGTYAKVQPRTGNLWHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLRVTGLEPTQAVTVIDTDLTVDVEVPEEQTERERE 295          
BLAST of mRNA_E_fasciculatus_S2_contig70.15151.1 vs.
Match: UBX (domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YG13_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.580e-32
Identity = 125/317 (39.43%), Postives = 169/317 (53.31%), Query Frame = 2
Query:   83 LNLDSRGNKLKKEQQKRRDAARLRIQRERRSKEAAAKDQARIXXXXXXXXXXXXXXXXXXXXXXXXDQIRTAGISYKESLLAVTADGEGDKILLPPSALESLSRQDAVGLGPMLFELTCTTSGAAPTGQQQSEKTPALQGGTMTTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQMPSRTSDESNVANDDPENAKAERPPVEGLENVVVRYVRLAKATFARVVPETVGLSQVS-ELRAMLEHNMRNHATLTVGDHLSVWRRGKE-FSVKVVELRPEPQVTVIDTDMEIELDLP-------EKAREQLQEKGA 1006
            L+L+SR  K  +EQ KRRD A+ +I+ ERR + A AK +  +          XXXXXXXXX     +Q  T GI Y + L  V   G+GDKI LP SALE L+ Q+A+ LG   FEL+            + E T + Q       R THAGVLEFVADEGT+GLP KV  SL    A Q+P                           +N+ VR+VRL K  FA + P   G  +   + + +LE +++ H TLTVGD L V R G+E F V V EL+PE  V +++TD+E+ + LP       ++A +QL+E+ A
Sbjct:    3 LDLNSRSAKWNREQTKRRDQAKRKIEAERRKRVAVAKAREELEALQTQKRVEXXXXXXXXXQQALEEQRLTGGIKYLQQLRPVPTSGDGDKITLPVSALEELNPQNALELGVFTFELS----------YDEPEATESWQ-------RKTHAGVLEFVADEGTVGLPPKVAASLF-QNAKQLP---------------------------DNIRVRFVRLEKGKFASLQPRGDGFGERQIDFKHLLERSLKAHTTLTVGDVLFV-RHGRETFEVVVAELKPEEAVNILNTDLEVAI-LPSESAARAKEAEKQLEEEAA 272          
BLAST of mRNA_E_fasciculatus_S2_contig70.15151.1 vs.
Match: UBX (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWI9_GLOUD)

HSP 1 Score: 140 bits (353), Expect = 1.580e-31
Identity = 122/301 (40.53%), Postives = 159/301 (52.82%), Query Frame = 2
Query:   83 LNLDSRGNKLKKEQQKRRDAARLRIQRERRSKEAAAKDQARIXXXXXXXXXXXXXXXXXXXXXXXXDQIRTAGISYKESLLAVTADGEGDKILLPPSALESLSRQDAVGLGPMLFELTCTTSGAAPTGQQQSEKTPALQGGTMTTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQMPSRTSDESNVANDDPENAKAERPPVEGLENVVVRYVRLAKATFARVVPETVGLSQVS-ELRAMLEHNMRNHATLTVGDHLSVWRRGKE-FSVKVVELRPEPQVTVIDTDMEIELDLPEKA 979
            ++L++RG K KKE+QKRRDAA+ ++Q E+  + AA K Q  +       XXXXXXX          +Q  T GI Y + L  V A  +GDKI LP SALE L+ Q+A  LG   FEL                + P  Q     TTR THAGVLEFVA+EGT+GLP KV  SL               SN     P             E + V+Y+RL K  FA + P  VG  +   + + +LE +++ H TLTVGD L V R GKE F V V EL+PE  V +++TD+E+ L LP +A
Sbjct:    3 MDLNTRGAKWKKEEQKRRDAAKRKLQTEQLKRAAADKVQREMERVQAQKXXXXXXXQAQLEELALEEQRVTGGIKYLQRLRPVPAVTDGDKITLPVSALEELNPQNAHELGVFTFELLY--------------EDPLTQ-----TTRKTHAGVLEFVAEEGTVGLPPKVAASLF--------RNLGGSSNSVGQVP-------------EAIQVKYIRLEKGKFASLQPRGVGFGEREIDFKKILERSLKAHTTLTVGDVLFV-RHGKETFEVLVAELQPEAAVNILNTDLEVAL-LPSEA 261          
BLAST of mRNA_E_fasciculatus_S2_contig70.15151.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVE0_HETAK)

HSP 1 Score: 129 bits (324), Expect = 4.670e-31
Identity = 71/141 (50.35%), Postives = 90/141 (63.83%), Query Frame = 2
Query:  524 TTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQMPSRTSDESNVANDDPENAKAERPPVEGLENVVVRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMRNHATLTVGDHLSVWRRGKEFSVKVVELRPEPQVTVIDTD 946
            TTH GVLEF A+EG +GLP KV+ SL G A  Q                +N + +      +  V ++Y+RL KATFA++ PE  GLSQ+ E+RA+LEHNMRNHATL++GD L VW RGK F  +V+ELRP    TVIDTD
Sbjct:   14 TTHCGVLEFTAEEGCVGLPPKVLASL-GIAPEQ----------------DNTQHQGVAPSSVGQVQIKYIRLEKATFAKIRPEKAGLSQIDEIRAVLEHNMRNHATLSLGDKLIVWFRGKAFECEVLELRPAAACTVIDTD 137          
BLAST of mRNA_E_fasciculatus_S2_contig70.15151.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RIV7_9STRA)

HSP 1 Score: 135 bits (341), Expect = 4.860e-30
Identity = 104/295 (35.25%), Postives = 143/295 (48.47%), Query Frame = 2
Query:   83 LNLDSRGNKLKKEQQKRRDAARLRIQRERRSKEAAAKDQARIXXXXXXXXXXXXXXXXXXXXXXXXDQIRTAGISYKESLLAVTADGEGDKILLPPSALESLSRQDAVGLGPMLFELTCTTSGAAPTGQQQSEKTPALQGGTMTTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQMPSRTSDESNVANDDPENAKAERPPVEGLENVVVRYVRLAKATFARVVPETVGLSQVS-ELRAMLEHNMRNHATLTVGDHLSVWRRGKE-FSVKVVELRPEPQVTVIDTDMEIEL 961
            L+L+SR +K  +EQ KRR+ A+ +I+ ERR + A AK +  +                        +Q  T GI Y + L  V   G+GDKI LP SALE L  Q+A+ LG   FEL+                     GG  T  R THAGVLEFVA+EGT+GLP KV  SL      Q+P                            ++ VR+VRL K  FA + P   G      + + MLE +++ H TLT GD L V R G+E F V V EL+PE  + +++TD+E+++
Sbjct:    3 LDLNSRNSKWNREQNKRREQAKRKIETERRKRAAVAKAREELEKLQMQKRVERIAELERQEQQALEEQRLTGGIKYLQQLRPVPTKGDGDKITLPVSALEELDPQNALELGVFTFELSFDED--------------HHDGGASTLKRQTHAGVLEFVAEEGTVGLPPKVATSLF-RYTKQLPG---------------------------SIKVRFVRLEKGRFATLQPRGEGFGDRQIDFKHMLERSLKTHTTLTEGDVLFV-RHGRETFEVLVAELKPERAINILNTDLEVDM 254          
BLAST of mRNA_E_fasciculatus_S2_contig70.15151.1 vs.
Match: Ubiquitin (fusion degradation protein 1 n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CLD7_PHYNI)

HSP 1 Score: 134 bits (338), Expect = 1.150e-29
Identity = 107/295 (36.27%), Postives = 145/295 (49.15%), Query Frame = 2
Query:   83 LNLDSRGNKLKKEQQKRRDAARLRIQRERRSKEAAAKDQARIXXXXXXXXXXXXXXXXXXXXXXXXDQIRTAGISYKESLLAVTADGEGDKILLPPSALESLSRQDAVGLGPMLFELTCTTSGAAPTGQQQSEKTPALQGGTMTTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQMPSRTSDESNVANDDPENAKAERPPVEGLENVVVRYVRLAKATFARVVPETVGLSQVS-ELRAMLEHNMRNHATLTVGDHLSVWRRGKE-FSVKVVELRPEPQVTVIDTDMEIEL 961
            L+L+SR  K  +EQ KRR+ A+ +I+ ERR + AAAK    +                        +Q  T GI Y + L  V   G+GDKI LP SALE L+ Q+A+ LG   FEL+          QQ  E + A         R THAGVLEFVADEGT+GLP KV  SL                             R   E  +++ VR+VRL K  FA + P   G      + + MLE +++ H TLT GD L V R G+E F V V EL+PE  + +++TD+E+++
Sbjct:    3 LDLNSRNAKWNREQNKRREQAKRKIETERRKRAAAAKASEELEKLQMQKRVERIAELERQEQQALEEQRLTGGIRYLKQLRPVPTTGDGDKIALPVSALEELNPQNALELGVFTFELSFDED------QQGGEASIAK--------RQTHAGVLEFVADEGTVGLPPKVAASLF----------------------------RHTKELPDSIQVRFVRLEKGKFASLQPRGEGFGDRQIDFKHMLERSLKAHTTLTEGDVLFV-RHGRETFEVLVAELKPERAINILNTDLEVDM 254          
BLAST of mRNA_E_fasciculatus_S2_contig70.15151.1 vs.
Match: UBX (domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KPJ2_9STRA)

HSP 1 Score: 134 bits (336), Expect = 2.200e-29
Identity = 125/307 (40.72%), Postives = 162/307 (52.77%), Query Frame = 2
Query:   83 LNLDSRGNKLKKEQQKRRDAARLRIQRERRSKEAAAKDQARIXXXXXXXXXXXXXXXXXXXXXXXXDQIRTAGISYKESLLAVTADGEGDKILLPPSALESLSRQDAVGLGPMLFELTCTTSGAAPTGQQQSEKTPALQGGTMTTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQMPSRTSDESNVANDDPENAKAERPPVEGLENVVVRYVRLAKATFARVVPETVGLSQVS-ELRAMLEHNMRNHATLTVGDHLSVWRRGKE-FSVKVVELRPEPQVTVIDTDMEIELDLPEKAREQLQE 997
            L+L+SR  K  +EQ KRRD A+ +I+ ERR            XXXXXXXXXXXXXX          +Q  T GI Y + L+ V   G+GDKI LP SALE L+ Q+A+ LG   FEL+    G      QQ E    L          THAGVLEFVADEGT+GLP KV  SL     H +P                           E++ VR+VRL K  FAR+     G      + + MLE ++R+H TL VGD L V R G+E F V V EL+PE  V +++TD+E+++ +P +A  Q +E
Sbjct:    3 LDLNSRNAKWSREQNKRRDQAKRKIETERRXXXXXXXXXXXXXXXXXXXXXXXXXXLARQEQHALEEQRLTGGIKYLQQLIPVPTTGDGDKITLPVSALEELNPQNALELGVFTFELSYEEHG------QQGENERIL----------THAGVLEFVADEGTVGLPPKVAASLFQQTEH-LP---------------------------ESIRVRFVRLEKGKFARLQARGDGFGDRQIDFKHMLERSLRSHTTLMVGDVLFV-RHGRETFEVVVAELKPEAAVNILNTDLEVDI-VPSEAATQAKE 263          
BLAST of mRNA_E_fasciculatus_S2_contig70.15151.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z601_PHYSP)

HSP 1 Score: 133 bits (335), Expect = 3.230e-29
Identity = 109/295 (36.95%), Postives = 151/295 (51.19%), Query Frame = 2
Query:   83 LNLDSRGNKLKKEQQKRRDAARLRIQRERRSKEAAAKDQARIXXXXXXXXXXXXXXXXXXXXXXXXDQIRTAGISYKESLLAVTADGEGDKILLPPSALESLSRQDAVGLGPMLFELTCTTSGAAPTGQQQSEKTPALQGGTMTTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQMPSRTSDESNVANDDPENAKAERPPVEGLENVVVRYVRLAKATFARVVPETVGLSQVS-ELRAMLEHNMRNHATLTVGDHLSVWRRGKE-FSVKVVELRPEPQVTVIDTDMEIEL 961
            L+L+SR  K  +EQ KRR+ A+ +I+ ERR + AAA+ +  +   XXXX                 +Q  T GI Y + L  V    +GDKI LP SALE L+ Q+A+  G   FEL+             + +   L+       R THAGVLEFVA+EGT+GLP KV  SL G +  Q+P                           ++V VR+VRL K  FA + P   G S    + + MLE +++ H TLT GD L V R G+E F V V ELRPE  V +++TD+E+++
Sbjct:    3 LDLNSRNAKWNREQNKRREQAKRKIETERRKRAAAARAREELEQLXXXXRVERIAELERQEQQALEEQRLTGGIKYLQRLRPVPTASDGDKISLPVSALEELNPQNALERGVFTFELSFEQXXXXXXXXXXAGENVPLK-------RLTHAGVLEFVAEEGTVGLPPKVAASLFGQS-RQLP---------------------------DSVQVRFVRLEKGQFASLQPRGDGFSDRQIDFKHMLERSLKAHTTLTEGDVLFV-RHGRETFEVLVAELRPERAVNILNTDLEVDI 261          
BLAST of mRNA_E_fasciculatus_S2_contig70.15151.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NSZ5_PHYIT)

HSP 1 Score: 132 bits (331), Expect = 9.350e-29
Identity = 105/298 (35.23%), Postives = 146/298 (48.99%), Query Frame = 2
Query:   83 LNLDSRGNKLKKEQQKRRDAARLRIQRERRSKEAAAKDQARIXXXXXXXXXXXXXXXXXXXXXXXXDQIRTAGISYKESLLAVTADGEGDKILLPPSALESLSRQDAVGLGPMLFELTCTTS---GAAPTGQQQSEKTPALQGGTMTTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQMPSRTSDESNVANDDPENAKAERPPVEGLENVVVRYVRLAKATFARVVPETVGLSQVS-ELRAMLEHNMRNHATLTVGDHLSVWRRGKE-FSVKVVELRPEPQVTVIDTDMEIEL 961
            L+L+ R  K  +EQ KRRD AR +I+ ERR + AAAK +  +                        +Q  T GI Y + L  V   G+GDKI LP SALE L+ Q+A+ LG   FEL+       G APT + Q                 THAGVLEFVA+E T+GLP KV  SL      Q+P+                           ++ VR+VRL K  FA + P+  G      + + MLE +++ H TLT GD L V R G+E F V V EL+P+  + +++TD+E+++
Sbjct:    3 LDLNMRNAKWAREQNKRRDQARSKIEAERRKRTAAAKAREELEKLQMQKRVERIAELEMQEQQALEEQRLTGGIKYLQQLRPVPTTGDGDKITLPVSALEELNPQNALDLGVFTFELSFDDDQQGGEAPTVRSQ-----------------THAGVLEFVAEERTVGLPPKVAASLF-RYTKQLPA---------------------------SIQVRFVRLEKGKFASLRPKGEGFGDRQIDFKHMLERSLKAHTTLTEGDVLFV-RHGRETFEVLVTELKPDRAINILNTDLEVDM 254          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig70.15151.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UBX7.330e-26083.49domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
UBX4.860e-4144.21domain-containing protein n=1 Tax=Nannochloropsis ... [more]
UBX1.580e-3239.43domain-containing protein n=1 Tax=Nothophytophthor... [more]
UBX1.580e-3140.53domain-containing protein n=1 Tax=Globisporangium ... [more]
Hypothetical4.670e-3150.35protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
Uncharacterized4.860e-3035.25protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A3... [more]
Ubiquitin1.150e-2936.27fusion degradation protein 1 n=9 Tax=Phytophthora ... [more]
UBX2.200e-2940.72domain-containing protein n=3 Tax=Phytophthora ker... [more]
Uncharacterized3.230e-2936.95protein n=1 Tax=Phytophthora sojae (strain P6497) ... [more]
Uncharacterized9.350e-2935.23protein n=2 Tax=Phytophthora infestans TaxID=4787 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig70contigE_fasciculatus_S2_contig70:30047..35546 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score746.5
Seed ortholog evalue8.1e-213
Seed eggNOG ortholog2880.D7FT74
Preferred nameubxn8
Model size2376
KEGG koko:K14016,ko:K18726
KEGG Pathwayko04141,map04141
KEGG ModuleM00400,M00403
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.ER-associated misfolded protein catabolic process
EggNOG OGsCOG5140@1,KOG1363@1,KOG1363@2759,KOG1816@2759
Ec32 ortholog descriptionUbiquitin fusion degradation protein UFD1
Ec32 orthologEc-06_003840.1
Cds size1509
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig70.15151.1prot_E_fasciculatus_S2_contig70.15151.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig70 30844..35476 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842359.2585242-UTR-E_fasciculatus_S2_contig70:30046..308431696842359.2585242-UTR-E_fasciculatus_S2_contig70:30046..30843Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig70 30047..30843 -
1696842359.3247652-UTR-E_fasciculatus_S2_contig70:35476..355461696842359.3247652-UTR-E_fasciculatus_S2_contig70:35476..35546Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig70 35477..35546 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842359.2717888-CDS-E_fasciculatus_S2_contig70:30843..315241696842359.2717888-CDS-E_fasciculatus_S2_contig70:30843..31524Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig70 30844..31524 -
1696842359.2825785-CDS-E_fasciculatus_S2_contig70:32410..330491696842359.2825785-CDS-E_fasciculatus_S2_contig70:32410..33049Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig70 32411..33049 -
1696842359.2969735-CDS-E_fasciculatus_S2_contig70:34975..351351696842359.2969735-CDS-E_fasciculatus_S2_contig70:34975..35135Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig70 34976..35135 -
1696842359.307595-CDS-E_fasciculatus_S2_contig70:35447..354761696842359.307595-CDS-E_fasciculatus_S2_contig70:35447..35476Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig70 35448..35476 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig70.15151.1

>prot_E_fasciculatus_S2_contig70.15151.1 ID=prot_E_fasciculatus_S2_contig70.15151.1|Name=mRNA_E_fasciculatus_S2_contig70.15151.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=503bp
MADFLNLDSRGNKLKKEQQKRRDAARLRIQRERRSKEAAAKDQARIEEQI
RARKLEQRRKEEEARKQEEADQIRTAGISYKESLLAVTADGEGDKILLPP
SALESLSRQDAVGLGPMLFELTCTTSGAAPTGQQQSEKTPALQGGTMTTT
RTTHAGVLEFVADEGTIGLPRKVVLSLLGAAAHQMPSRTSDESNVANDDP
ENAKAERPPVEGLENVVVRYVRLAKATFARVVPETVGLSQVSELRAMLEH
NMRNHATLTVGDHLSVWRRGKEFSVKVVELRPEPQVTVIDTDMEIELDLP
EKAREQLQEKGAQDRAKTLRAHMGAATTSSRGSSPTQSVSPPPSGGGYVV
GGKGSSIVAGGRDTSTTGLSPMDDSESDDDSDLDSDDERSAAGGAKKRAF
DLEKHRLAKFQQLPEEPPRDEEGVFTCQLRTTEGKVTRRFRFADALGVLL
DFCESQGGVPGHYRLVVPFPRRVLTRDDASAGTTLREAGLTSKQESVILE
RI*
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mRNA from alignment at E_fasciculatus_S2_contig70:30047..35546-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig70.15151.1 ID=mRNA_E_fasciculatus_S2_contig70.15151.1|Name=mRNA_E_fasciculatus_S2_contig70.15151.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5500bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig70:30047..35546- (Ectocarpus fasciculatus EfasUO2)
GCTCTTGTGACGCTGCCGTACCTTGCTTACAGAGAGGCGTCACGGACATT GCCCAGCCCTGAAGAGAGTGATGGCGGATTTTCTCAACCTGGATTCGAGG TAAGTGAGCTTGTCGGCGCAACGAGAGTCCCGCAAAGTTGACTACGCGCG GACTGCTGTTTCACCGAAGACGCCGTAGGCAGTGTTCAGCTAGTCCAGCT ACAGCAGTGCCACAACAGCAGTGTCGCCGTGTAGTTTCTGTCTCAGCCTG GTATTCGACTGGCACAGATCGGAAGCTTGCCGTCAATTCTCAGAGCATCC CACCCATATTTCTAAGACGTTCACTACGTAGCTGGCGTCTTCTCTCTGTA CTTTTCAAGAGTATCAACGTATGTATGCGTTATACACCCCCTTGGCTGGC ACTTTTGGCAGAGGCAACAAGCTCAAGAAGGAGCAGCAGAAGCGTCGAGA TGCCGCGAGGCTGAGAATTCAGAGAGAAAGGCGGAGTAAGGAAGCGGCCG CGAAGGATCAGGCGAGAATCGAGGAGCAGATTCGGGCGAGAAAGCTCGAG CAGCGACGGAAGGAGGAAGAGGTGGGCCATTTCGGATAGCGTGAGACGAA TAGAGGCCCTCGAAGGAACCACACAACATGTAAGATGTCCGCGACTGCTG TCGGTGAAGTGTGAGCGTTCCTAGAGGCCTGTCCGGCTACCTGTGAGTTT TTTCCCGTTGCTCAGCGTCCTCACTGTACCCATCGCGAACTTGCCACGCG ACAAGGCATTAAGTGCGGGCCGAGAGCGCTACCGCCGCGTACCGTGGGGA ATCGCGCAGACTGAAGGCTTCAGTCTGCGCGATTCCCCACGGTACGCGGC GGTAGCGCTCTCGGTCCCCACTGAATGCCTTGTCGCGTGGCAGGTCCGTG ATGGGTGCAGCGAGGACGCTCATCTCCGGGACGAAACTCGCAGGTAGCCG GACAGGCCTCTAGGTACGCTCACACTTCACCGACAGCAGTCGCGGGCATC TCCATTTCCTGCACGGCCTTGATCTTGGCCAGCGCTGGCCGCACACCCGA CCTGCAGAACGTGTTTTTGAAGTGTGCGGAGTACCCCAACCCCCCCCCCC CCTCACTGTTCAGAACTTGGCAGATGTTTACCAAATTGTTGGAGTTGAGG TTCTAGGCCAGTTCGGTTCTCAACGACAGAAATGACACCCATGTGCTATG CTGCCCAACAAGGCTAGTTTCGGATCATCAACTCGTGGGCAATATTGACC AGCACGTGTCTGAAACGTGTTGGCCATATATGTTCAGCCTCCCGACTCTC CTTTGTCCCGCGATGAGTTGCGCTTGCACTCTGTAGTCGCTGGGCGATTG GTCCCCGCAATATCCGTTGGTGGCCACGCAAGTTGAGCGGTGCTCAGAGT GGATAACGTCGGTTGGCCGCCGTTGCTTCTTTCATTCGGCCAGACTGGAA GAAAACCAATCCGACGTGTTTGTCGAAAGAGCCAAAAGAGTTCGAAGCAG CAGCGGTGGTGTTTATTTCGCATCCGCTCGACGTATGCAGAATCTCTTGT TGCCGAGCCTCCTATCGCCCCAACCCTCGATCAGCCACCACACAAGACGC ACCATGCACACACGTAGGGTGTCATTTTTGCCATAGATTCAGCTTGTGCG TAGGGGTCACCGACGAAACAAACTGGTGACACCTAGTGACGAGGCAGGTG GACGTGCCGGCGGTAGGCCTTTTTTCACACGCTCTCGACCCTCGCAAACT CAATTTCCGAGCATCCATCGTCTAGCGGTCTCTTACAAGTATCAACTAAA TAAAAGCATCACACAAGTTGGCGCCATTCGCACAGGTCCGGGGGCATTGC TTGTGATTTCCGTTGCTTGAGTTTTAGGGAGGGGTCACCAAATAACGAAA CCGGTGACAAGGTAGACAGCCATCTCCAGCAGCGATAGGGATAGCTCTTC CTTAACAGCGTGTTGACCCTCACCAGCTCGATTTCCAAGCCCCCGTTTGC CTCACAGTCTCCATCAACCGCCCCCCAATAGACCAGCATACACGCAGCTG TAGGCAGGATAGCTTAAAGCCGTTGCTGTTGCTTTGGCCTGCGGTGAGGT GCACATGACGAGATATACAGTGTTCAACGACCGTTGGAGTGCTTTTTTTT ATCGACTGCGGCGTTCGGGTTACAAGAAAACTTTGTATAAGACGGCTGGT TCCCACAATGCCAAAGAAGGACAAGGTTTTCTTTGCCTAGTACGAATTGC CCCAAGATGATTTCAACATTCAAGAACTCGCACACATTTGTCATGCCTGG GTCAAATCACGTACGCCGAACCATGTAAGGGGTCCGCTCGTCGCCCGAAG AGGGAAGTAGTTCTAGAGCCTCGGCGTTTTTCCGACGGGATGAAGCGGAC CAACAGACCGCCTAGTGTTAGAGGTTTGGTATTTGCCTGTTGCCTTTTCT GGTCGGGGTCATTCGTAACCAATCTCGTTTGTCGTTGAACCCAACAGGCG AGGAAGCAGGAAGAGGCAGATCAAATCCGAACCGCCGGCATCAGCTACAA GGAGTCTCTCCTGGCGGTCACAGCGGATGGCGAGGGGGACAAGATTCTCC TGCCACCATCCGCCCTTGAATCTCTTTCCAGGCAGGACGCGGTTGGCCTT GGACCCATGCTGTTCGAACTGACGTGCACCACCTCCGGTGCCGCTCCCAC CGGTCAGCAGCAGTCAGAAAAGACCCCGGCATTGCAAGGCGGCACGATGA CAACAACTCGAACGACGCACGCCGGGGTGTTGGAATTCGTTGCCGACGAG GGCACCATCGGGCTTCCTCGAAAAGTGGTGCTCAGCCTTCTGGGGGCTGC GGCACACCAGATGCCGTCCCGCACGAGCGACGAGAGCAACGTCGCGAACG ACGACCCAGAAAATGCGAAGGCTGAGAGGCCGCCGGTGGAAGGGCTTGAG AACGTGGTGGTGAGGTACGTCCGCCTCGCGAAGGCCACTTTCGCGAGAGT GGTGCCGGAGACGGTGGGGCTGTCCCAGGTTTCGGAGCTGAGAGCGATGT TGGAGCACAACATGCGCAACCACGCTACGTTGACGGTTGGGGACCACTTG AGCGTGTGGAGACGAGGGAAGGAGTTCAGCGTGAAGGTGAGAAGTACGAC TGGCGTAGAGGGAATCGTCTCTCGAGGGGTACAGAACAAGTGCCGGGAAT TCAGAATCAAAGTGGCCACCTTGTGTTTCATCTTTGAAGACCGATGCTGC CGAACGTCCAAATAGTTACTTACTGTCAGCAGGGGGTGTCGGGGCTGTGA TTTGAATGGTCTGGTTTGAGTGATAGATGTATTTCGTTTCGCAAGGCGTC GTTGCGTTTCGCTTCTATTCTTCCCCTACAGTGTGAGATTGCGTCGGGAT CCGTATTTTGGGTCTACATCTCGGCAGCGTTGTGTCCGATCACGAGCCAC AAGCGCAAGTTGCGCGCACTTCGTGTTGCCATGGTGTTTTGGCCAAACTG TTTGGCGCAAGGCCTCAAGGACACCGTTATGATGTATCGAAACTTCCCCC TTACCGCGGCACCGTCCTCTTCAGCTTCAAAGTCACGAGGAAAGGTGTTC GCTGCACACTGTGCCTCACCACACAGATGTGAAATGCGGCGATGTGTTTT GTTTTGATTTTGTGTCCTCCCTCGTCATGGTTGTGTCACCTCATCCTCGT AGGTCGAGATATGCATCGCCCTACTCTGTTTTGAGACGTAATTTTCCCTG AAACCTAGACCCTACCTGCCGTAGTCCTGTCACACCTGCGTGTGGAGATC TGGACAACACTGGGCAGTACGTAGTTTTCTGTGTTGTCCGCGGGGTAGCG TCGGGAGAAACCCTTTAATACCGGCGGGAATTCGATGCTTCGCAACTAAC GGCGTGAATGATTCATACCCTCTCGCTCTCACTGTGTGCTCTTGGAGGCG ATAAAAGCGTATTCACAAAACTTCCGTTCCCCACCCATATCCCCCAATGT GAACCGCTCCGGAACAACGCAGGTGGTTGAGCTGCGCCCTGAGCCTCAGG TAACCGTGATCGACACCGACATGGAGATAGAGCTAGACTTGCCGGAAAAG GCGAGGGAGCAGCTCCAGGAAAAGGGTGCGCAAGACCGGGCGAAGACCTT GCGCGCGCACATGGGCGCCGCAACGACCTCATCCCGCGGCTCTTCCCCGA CGCAGAGCGTGTCCCCGCCCCCATCTGGAGGAGGATACGTCGTGGGGGGC AAGGGTTCATCGATAGTGGCAGGTGGCAGGGACACCAGCACAACCGGGCT TTCCCCGATGGATGACAGCGAAAGCGACGACGATTCAGACCTCGACTCCG ATGACGAGCGATCGGCCGCCGGAGGCGCGAAGAAGCGTGCCTTCGACCTC GAGAAGCACCGCCTGGCCAAGTTCCAGCAACTCCCGGAGGAGCCGCCTAG AGACGAGGAAGGCGTGTTCACTTGCCAGCTAAGGACTACCGAAGGGAAGG TCACGAGGCGCTTCCGTTTTGCAGACGCTTTGGGGGTGTTGTTAGATTTT TGTGAATCCCAAGGCGGCGTCCCGGGTCACTACAGGCTGGTCGTGCCGTT CCCGAGGAGGGTTTTGACAAGAGACGATGCATCGGCGGGCACGACGTTGC GCGAAGCAGGGCTCACCTCGAAGCAGGAATCGGTGATTTTGGAGAGAATC TAGGTGTAGCAGCCAGATTTGTTTTTGATGTGTTTCTGTTTTGCTGTCCC CACCGTGCCCTGAAGCTCAGACAGGGTGCTGTCTGTTACTACTTTTGATT GCCGTAATTGCATCAACGCTGGCGTTGGGCGAAGGCGCAGTATCTTGCAG CGTTTCGCGGAGGTCCCTTGTCGGCGCGTGGACACGCTCGGCTGTTGTTT AATTAGTGATCATTTGTGTCTTTGTACTTTCGAGAGTGTGTCCGTCGACT GATTTACTTTGGAGGTCGTTCAGCGCGCTTTGGAGGCGCAACAACCCCTC GGAACCCTTGTTTGTGTTGTGGTGGTACCTCCCTGAACGTGGCACAACGT AGTGCGTCAAGTAAATATCAACGACCGTAGACCAAATTAAGATCTTGTAC AGAAAATCGTCCGGCGAGGACGCATCAGAATCGATGCAGCAAAATGTTAT GGAAATGTCGATGCCTGCCCGGAACCAGAGATCGAGGGAAAATGCCTAGG TATGTCTAGCTGCTTGCGCGGTTGTGGTTGTGGCAAAAACAATGGCAACG ACGCATACGCTTCCGCGAATTCGGGGATGTTCGTTTGTCGCGGAGAACAA AACAAAACCTCCCAGAGTGTAAATCGATTGGTGGGCAGTGGGGATATTTC ATTCGCGTTTCCTGATGCCCCGTCTGTGGTGTTTGTGCGGTACCGGAGGG TCTTGCGTCATGAGGCCTCTTGTTGATGCCGGCCGCACTCCCGGGGAGCC AGGCTTGCTGCGGTGTTATCAAGGTTCGCTCACGTCGACGGACTCTCCTG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig70:30047..35546-

>mRNA_E_fasciculatus_S2_contig70.15151.1 ID=mRNA_E_fasciculatus_S2_contig70.15151.1|Name=mRNA_E_fasciculatus_S2_contig70.15151.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1509bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig70:30047..35546- (Ectocarpus fasciculatus EfasUO2)
ATGGCGGATTTTCTCAACCTGGATTCGAGAGGCAACAAGCTCAAGAAGGA
GCAGCAGAAGCGTCGAGATGCCGCGAGGCTGAGAATTCAGAGAGAAAGGC
GGAGTAAGGAAGCGGCCGCGAAGGATCAGGCGAGAATCGAGGAGCAGATT
CGGGCGAGAAAGCTCGAGCAGCGACGGAAGGAGGAAGAGGCGAGGAAGCA
GGAAGAGGCAGATCAAATCCGAACCGCCGGCATCAGCTACAAGGAGTCTC
TCCTGGCGGTCACAGCGGATGGCGAGGGGGACAAGATTCTCCTGCCACCA
TCCGCCCTTGAATCTCTTTCCAGGCAGGACGCGGTTGGCCTTGGACCCAT
GCTGTTCGAACTGACGTGCACCACCTCCGGTGCCGCTCCCACCGGTCAGC
AGCAGTCAGAAAAGACCCCGGCATTGCAAGGCGGCACGATGACAACAACT
CGAACGACGCACGCCGGGGTGTTGGAATTCGTTGCCGACGAGGGCACCAT
CGGGCTTCCTCGAAAAGTGGTGCTCAGCCTTCTGGGGGCTGCGGCACACC
AGATGCCGTCCCGCACGAGCGACGAGAGCAACGTCGCGAACGACGACCCA
GAAAATGCGAAGGCTGAGAGGCCGCCGGTGGAAGGGCTTGAGAACGTGGT
GGTGAGGTACGTCCGCCTCGCGAAGGCCACTTTCGCGAGAGTGGTGCCGG
AGACGGTGGGGCTGTCCCAGGTTTCGGAGCTGAGAGCGATGTTGGAGCAC
AACATGCGCAACCACGCTACGTTGACGGTTGGGGACCACTTGAGCGTGTG
GAGACGAGGGAAGGAGTTCAGCGTGAAGGTGGTTGAGCTGCGCCCTGAGC
CTCAGGTAACCGTGATCGACACCGACATGGAGATAGAGCTAGACTTGCCG
GAAAAGGCGAGGGAGCAGCTCCAGGAAAAGGGTGCGCAAGACCGGGCGAA
GACCTTGCGCGCGCACATGGGCGCCGCAACGACCTCATCCCGCGGCTCTT
CCCCGACGCAGAGCGTGTCCCCGCCCCCATCTGGAGGAGGATACGTCGTG
GGGGGCAAGGGTTCATCGATAGTGGCAGGTGGCAGGGACACCAGCACAAC
CGGGCTTTCCCCGATGGATGACAGCGAAAGCGACGACGATTCAGACCTCG
ACTCCGATGACGAGCGATCGGCCGCCGGAGGCGCGAAGAAGCGTGCCTTC
GACCTCGAGAAGCACCGCCTGGCCAAGTTCCAGCAACTCCCGGAGGAGCC
GCCTAGAGACGAGGAAGGCGTGTTCACTTGCCAGCTAAGGACTACCGAAG
GGAAGGTCACGAGGCGCTTCCGTTTTGCAGACGCTTTGGGGGTGTTGTTA
GATTTTTGTGAATCCCAAGGCGGCGTCCCGGGTCACTACAGGCTGGTCGT
GCCGTTCCCGAGGAGGGTTTTGACAAGAGACGATGCATCGGCGGGCACGA
CGTTGCGCGAAGCAGGGCTCACCTCGAAGCAGGAATCGGTGATTTTGGAG
AGAATCTAG
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