mRNA_E_fasciculatus_S2_contig7.15145.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7.15145.1
Unique NamemRNA_E_fasciculatus_S2_contig7.15145.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7.15145.1 vs.
Match: Pyr_redox_2 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA9_ECTSI)

HSP 1 Score: 898 bits (2320), Expect = 0.000e+0
Identity = 477/656 (72.71%), Postives = 484/656 (73.78%), Query Frame = 1
Query:    1 MSVHGRRRSSALAAQVLEAIRETDEEVFEEILQYDLVALGGGVATGYWGKAIAGSLGENGRTAAIVSGDPAGFAPFERPALSKTCLNPGAKGSRDFSCSSSEFPFVCKGSGGEAHAPEWYKDNGITILSSCQAVSVDLDQKFLKVKRVTASNGQLVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCSCTRHPDVGGSPLACTFPDRFGFGSVHYLRDFGDTVKLVHAMGRVEADGQDTCKEPVVLIGGGFISCEVAAAVATYCPGMQLVMVMPGEDVMSSSGFGKEVCHFYEKQLARVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGSCMKKTFPRTFGPADPHFTDCRGVVLSNTQTGEKVWLAARFVVAGIGSVPNSDLFLKSLFLSEDGGIITDSYLRTSHPSGDVFAAGDVACVPVPLGGNDDTSFMATTNRSEHVKAARDMGAFAAGMMLGGDDSGESYNPVPHMYSRFLDISWKFYGFARGEVCVLGMETFPTTRTFGAFWLHGGKIVGAFLEEDPSSRVDHSAILERMAREQPAVLSIKRLRKCPLEKLLANPHCLEPPKLGVGEFHADTDETSIEEAFRKRAGGANTAKTADMASIMQELGADWDEDELEDALRALDPSDSGAVNFSDFVEWWSN 1968
            MS HGRRRSSALAAQVLEAIRETDEE+FEEILQYDLVALGGGVA GYWG+                                                          GSGGEAH PEWYK NGITILS CQAVSVDLDQKFLKVKRVTASNG+LVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSC CTRHPDV GSPLACTFPDRFGFGSVHYLRDFGDTVKLVHAMGRVEADGQDTCKEPVVLIGGGFISCEVAAAVAT+CPGMQLVMVMPGEDVMSSSGFGKEVCHFYEKQLARVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGS MKKTFPRTFGPADPHFTDCRGVVLSNTQTGEKVWL ARFVV GIGSVPNSDLFLKSL LSEDGGIITDSYLRTSHPSGDVFAAGDVACVP                                                                                                    EDPSS VDHSAILERMARE+PAVLSIKRLRKCPLEKLL NPHCLEPPKLGVGEFHADTDETSIEEAFRKRAGGA+TAK ADMASIMQELGADWDEDELEDALRALDPSDSG+VNFSDFVEWWSN
Sbjct:    1 MSAHGRRRSSALAAQVLEAIRETDEEIFEEILQYDLVALGGGVAAGYWGE----------------------------------------------------------GSGGEAHDPEWYKTNGITILSRCQAVSVDLDQKFLKVKRVTASNGELVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCCCTRHPDVDGSPLACTFPDRFGFGSVHYLRDFGDTVKLVHAMGRVEADGQDTCKEPVVLIGGGFISCEVAAAVATHCPGMQLVMVMPGEDVMSSSGFGKEVCHFYEKQLARVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGSSMKKTFPRTFGPADPHFTDCRGVVLSNTQTGEKVWLLARFVVVGIGSVPNSDLFLKSLVLSEDGGIITDSYLRTSHPSGDVFAAGDVACVP----------------------------------------------------------------------------------------------------EDPSSGVDHSAILERMARERPAVLSIKRLRKCPLEKLLDNPHCLEPPKLGVGEFHADTDETSIEEAFRKRAGGASTAKRADMASIMQELGADWDEDELEDALRALDPSDSGSVNFSDFVEWWSN 498          
BLAST of mRNA_E_fasciculatus_S2_contig7.15145.1 vs.
Match: Pyr_redox_2 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW4_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 1.890e-94
Identity = 214/596 (35.91%), Postives = 298/596 (50.00%), Query Frame = 1
Query:  100 YDLVALGGGVATGYWGKAIAGSL-------GENGRTAAIVSGDPAGFAPFERPALSKTCLNPGAKGSRDFSCSSSE-FPFVCKGSGGEAHAPEWYKDNGITILSSCQAVSVDLDQKFLKVKRVTASNGQLVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCSCTRHPDVGGSPLACTFPDRFGFGSVHYLRDFGDTVKLVHAMGRVE----ADGQDTCKEPVVLIGGGFISCEVAAAVATYCPGMQLVMVMPGEDVMSSSGFGKEVCHFYEKQLARVGVAFAKGYRVNRLWGIEEEGCFPTLE-RSLQGSCMKKTFPRTFGPADPHFTDCRGVVLSNTQTGEKVWLAARFVVAGIGSVPNSDLFLKSLFLSEDGGIITDSYLRTS--HPSGD----------------VFAAGDVACVPVPLGGNDDTSFMATTNRSEHVKAARDMGAFAAGMMLGGD-------DSGES--------------YNPVPHMYSRFLDISWKFYGFARGEVCVLGMETFPTTRTFGAFWLHGGKIVGAFLEEDPSSRVDHSAILERMAREQPAVLSIKRLRKCPLEKLLANPHCLE 1731
            +D+V LGGGV+ GYW + +   L       G N     +V+G P G  P+ER  +SK CL P    SRD+    ++ FPF   G+  E     WY+DNG+T+LSSC+   VD+    L++ +                            P+++  +  S          +C C RH D+ G  L    P+ +G GS HYLRD GD +KLV A+  V     A G       V L+GGG +  EVAAA+ T+ PG++ +++M G  +M    F +E+  FYE++L + GV   K     RLWG+EE+G F TL  R +            FGPA   FT+CRGVVL NT+    + + AR V+ GIG+VPNS+LF   L +SEDGG++ D+  RT+   PS D                ++AAGDVA  P+ L G           R EH++ ARDM   AA  M+G          +GE+              Y PVP   SRFL +SW+FYG A GEV VLG   F TTRTFGAFW+   ++VGAFLE      ++    + ++ R +P V S + L+   L   L +P  +E
Sbjct:    7 FDMVCLGGGVSAGYWAEEVVSLLKSGAEQPGFNRPKLCVVTGYPDGLVPYERSEMSKECLRPENNHSRDWQAWGNKVFPFTSTGNDRERRNARWYRDNGVTVLSSCECYEVDVANATLRLYQ----------------------------PKRLQGDQDS----------ACFCVRHSDLRGPKL--DKPEAYGLGSAHYLRDVGDCIKLVKALSTVPSGGGAGGGTGDANTVALVGGGVLCMEVAAAIVTHYPGVRPILLMSGSRLMPDF-FNQEMSDFYEEKLKQAGVRLEKNVTAERLWGLEEQGEFDTLGGRRVH-----------FGPAPRGFTECRGVVLRNTEDC-LIHVPARSVIIGIGAVPNSELFRGKLEMSEDGGVLVDAQCRTAVQPPSEDGGGGGIDVGSAAPPRPIYAAGDVAAFPLALEGFAPV-------RHEHIQNARDMAICAARNMVGSSAWGSLVSSAGEAGFQKDYYGGGELPMYQPVPGFSSRFLGLSWRFYGVAEGEVVVLGAAEFRTTRTFGAFWVRKERVVGAFLE---GGTIEQQIAVAQVTRLRPKVFSSQLLKGSQLGDFLEDPGSIE 539          
BLAST of mRNA_E_fasciculatus_S2_contig7.15145.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4F3_9STRA)

HSP 1 Score: 318 bits (815), Expect = 2.150e-94
Identity = 226/680 (33.24%), Postives = 334/680 (49.12%), Query Frame = 1
Query:   97 QYDLVALGGGVATGYWGKAI---AGSLGENGRT-AAIVSGDPAGFAPFERPALSKTCLNPGAKGSRDFSCSSSEFPFVCKGSGGEAHAPEWYKDNGITILSSCQAVSVDLDQKFLKVKRVTASNGQLVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCSCTRHPDVGGSPLACT------------------------FPDRFGFGSVHYLRDFGDTVKLVHAMGRVEADGQDTCKEPVVLIGGGFISCEVAAAVATYCPGMQLVM--------VMPG---EDVMSSSGF--GKEVCHFYEKQLARVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGSCMKKTFPRTFGPAD-PHFTDCRGVVLSNTQTGEKVWLAARFVVAGIGSVPNSDLFLKSLFLSEDGGIITDSYLRTSHPSGDVFAAGDVACVPVPLGGNDDTSFMATTNRSEHVKAARDMGAFAAGMML---------GGDDS-----GESYNPVPHMYSRFLDISWKFYGFARGEVCVLGMETFPTTRTFGAFWLHGGKIVGAFLEEDPSSRVDHSAILERMAREQPAVLSIKRLRKCPLEKLLANPHCLEPPKLGVGEFHADTDETSIEEAFRKRAGGANTAKTADMASIMQELGADWDEDELEDALRALDPSDSGAVNFSDFVEWWSN 1968
            Q  ++ +GGGVA  +  +A+   A  L E  +    I+S  PAG +P++R  +SK  L+     +  F                    P     +G+ + S       D D K     +VT  +   + GD  ++ Y +L+IATGAR + + D+     +    +  + S     + GG  +AC                              GFGSVHYLRD GD  K+  A+   EADGQ+TC +PVV++GGG ++ E+AA +A +  G ++ +        +MP    ED+   +G    K+V  FYE+QL + GV F + +R  RLW ++E G FPT+E       +++T PR F P    +F+ CRG+V+ N  + E+ W+AA+ V+  +G  PNS +F   L L++D  I  D+  RTSH SGDVFA GDVA  P+P              R  H + A     + A   +         G  DS     G+ ++PVP + S+ LD+ W FYG   GE   LG +   + R FG FW+   ++VG FLE       +   I E++A  +P +  + + R    E  LA+P  +EPP+LG GEF+A+ D   I  AF K  G    AKT  M  +M++LGADWD +E ++ALRALDP  S  V+   F EWW N
Sbjct:    4 QARVLVVGGGVAAAHVAQALCERAEELPETDKALCTILSAYPAGISPYDRSRISKDALDCTRLDATSF--------------------PSLELPDGVALWSGKVVTKCDPDAK-----KVTYRDA--ITGDEDEITYEKLIIATGARAKVLDDQPYLWQDKHSDVVDNGSI----EEGGEDIACAPAXXXXXXXXXXXPAPRIRPWCLQADKNCGFGSVHYLRDIGDAAKVSEAVSMKEADGQETCSDPVVIVGGGILTMELAAKIARF-RGQKVPVNVVLSRDRIMPKVFREDIAPEAGSLGAKDVAEFYERQLVKCGVKFIREHRCLRLWDVDESGEFPTMEGPAIS--LQRTRPRRFEPLQGEYFSTCRGIVVENNHSAERSWIAAKCVILCLGDEPNSQVF-SFLDLADDSSIKVDATCRTSHSSGDVFAVGDVASYPLPRSKE-------RCMRLPHYQQAFSTAVYVAHQCIDAMKQPSRPGTRDSRRSIGGDPFDPVPCITSQVLDLDWVFYGRNVGECVPLGFDG-NSDRYFGCFWVEDMRVVGCFLEGGSD---EEKTICEKIAEMRPRLTRMHKFRSLECEDFLADPLGMEPPELGPGEFNAELDAKYIAIAFDKY-GRDGQAKTQAMGDLMRDLGADWDAEEEKEALRALDPLGSNQVSLECFTEWWLN 636          
BLAST of mRNA_E_fasciculatus_S2_contig7.15145.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVG3_9STRA)

HSP 1 Score: 309 bits (792), Expect = 5.670e-91
Identity = 221/655 (33.74%), Postives = 324/655 (49.47%), Query Frame = 1
Query:  109 VALGGGVATGYWGKAIAGSLGENGRTAAIVSGDPAGFAPFERPALSKTCLNPGAKGSRDFSC---------SSSEFPFVCKGSGGEAHAPEWYKDNGITILSSCQAVS-----VDLDQKFLKVKRVTASNGQLVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCSCTRHPDVGGSPLACTFPDRFGFGSVHYLRDFGDTVKLVHAMGRVEADGQDTCKEPVVLIGGGFISCEVAAAVATYCPGMQLVMVMPGEDVMSS---SGFGKEVCHFYEKQLARVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGSCMKKTFPRTFGPADPHFTDCRGVVLSNTQTGEK------------VWLAARFVVAGIGSVPNSDLFLKSLFLSED---GGIITDSYLRTSHPSGDVFAAGDVACVPVPLG--GNDDTSFMATTNRSEHVKAARDMGAFAAGMMLGGDDSGESYNPVPHMYSRFLDISWKFYGFARGEVCVLGMETFPTTRTFGAFWLHGGKIVGAFLEEDPSSRVDHSAILERMAREQPAVLSIKRLRKCPLEKLLANPHCLEPPKLGVGEFHADTDETSIEEAFRK-RAGGANTAKTADMASIMQELGADWDEDELEDALRALDPSDSGAVNFSDFVEWWSN 1968
            V +GGG   G W  ++A      G    I+S    G  P++   L+ T ++P A   R FS          SSS      KGSGG      WY+ +G+  L  C+  +      + DQ  L V +V A   QL       VV  ++  + G R  + AD   S  + +  L          D   S ++ T  +R+GFGS+H L  F D  K V A+ R E DGQ+TC +PVV++G G  + +V A +  + P + +V+V+PG  ++ S        ++  FYE+QL +  V  A+GY V R W   E G F TLE    G  ++ T PR F    P F   RG+VL   Q   +            V L AR  +      P++ +F  S  L  D   G +  D   RT  P   V+A G  A  P+  G    D  S    ++ +  +    DM A A G  + G  +  +  P+PH    F D+  +F G   GE  ++G +T    + F   ++  G++VG FLE    S   H   LE +ARE+P +LS+K+LRK PL +L+ +P CL PP+LGVGEF A+ D+ +I+EAFR+    GA   KT+D+A++M+ELGADWD +E  +A  ALDP + G+V+++ FV+WW N
Sbjct:   10 VFVGGGSVAGRWAASLASHGAAEGSL--ILSHHLQGVYPYDEQQLATTLIDPDA---RLFSSILTIPWVKDSSSSVEEAAKGSGGVVMDATWYQGHGVEFLWQCEVTAWTKEPQEGDQGELHVLQVLADGRQLQVVCDEFVVGPQMDYSHGVRLHEGADAAASAPSPATDLHADVVI----DPENSTVSLTDSNRYGFGSIHTLTSFQDAFKFVVAVTRAEEDGQETCLDPVVVVGDGVEAMQVIAMLVKFLPDLPVVLVLPGGSLLPSLIPRAVPSDIRDFYERQLTKNNVKIARGYEVVRPWATTETGSFSTLEGPASG--LQPTRPRNFESCQPQFVQSRGLVLQRVQLDNESEMGTGADQQGLVHLPARMALLLPRPSPSTSIF--SSLLPTDPATGALEVDDRFRTPVPG--VYAVGGAAAFPLVDGTAATDGLSGATNSHWTPLLPTQWDM-AEAVGRDMAGTQAPIAPTPIPHADMSFFDLHCRFRGVTSGEPVMVG-DTTGRPKFFACVFVRQGRLVGIFLEGGDQS---HDEALEVIARERPQILSVKKLRKLPLPQLMTDPFCLVPPELGVGEFVAEVDDEAIQEAFRRFDITGAGCVKTSDLAALMKELGADWDAEEQAEAQEALDPFEKGSVSYASFVDWWKN 644          
BLAST of mRNA_E_fasciculatus_S2_contig7.15145.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXU9_9STRA)

HSP 1 Score: 184 bits (466), Expect = 6.010e-49
Identity = 106/276 (38.41%), Postives = 148/276 (53.62%), Query Frame = 1
Query: 1204 SEDGGIITDSYLRTSHPSGDVFAAGDVACVPVPLGGNDDTSFMATTNRSEHVKAARDMGAFAAGMMLGG-------------------DDSGESYNPVPHMYSRFLDISWKFYGFARGEVCVLGMETFPTTRTFGAFWLHGGKIVGAFLEEDPSSRVDHSAILERMAREQPAVLSIKRLRKCPLEKLLANPHCLEPPKLGVGEFHADTDETSIEEAFR--KRAGGANTAKTADMASIMQELGADWDEDELEDALRALDPSDSGAVNFSDFVEWWSN 1968
            S  G +I D++ RT+H SGD+FAAGDVAC P+ L G +        N S HV+ AR+M  F A  M                       + G+ + PVP  YSR L++ W FYG A+GE  VL +E +   + FG FWL   ++VGAFLE       +   IL  +A  +P V SIK  R+  L++ L NP  L P  L  G+F A+T    + E F   +   G++  K   +  IM+ELGADW++ EL +A RALDP   G V+++ F +WW+N
Sbjct:    4 SPGGHLIVDNFCRTTHYSGDIFAAGDVACFPLELEGGE------MVNHS-HVQNAREMAQFVAQCMADPLYESTANTPSAVQERAASVGNRGQPFQPVPSFYSRVLELHWNFYGIAQGEPVVLDLEHYEERKRFGVFWLRDNRVVGAFLE---GGTAEEHEILRDVAVSRPEVRSIKMFRRADLQEFLDNPRFLAPDSLEPGDFAAETHSNIMHEVFHGFEIKPGSSRVKLEHLEPIMKELGADWNKTELAEAYRALDPHGLGVVSYNVFCQWWTN 269          
BLAST of mRNA_E_fasciculatus_S2_contig7.15145.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FEA6_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.120e-39
Identity = 109/313 (34.82%), Postives = 155/313 (49.52%), Query Frame = 1
Query: 1120 KVWLAARFVVAGIGSVPNSDLFLKSLFLSEDGGIITDSYLRTSHPSGDVFAAGDVACVPVPLGGNDDTSFMATTNRSEHVKAARDMGAFAAGMMLGGDDSGESYNP-VPHMYSRFLDISWKFYGFARG--EVCVLGMETFPTTRT---FGAFWL--------HGGKIVGAFLE----EDPSSRV----------DHSAILERMAREQPAVLSIKRLRKCPLEKLLANPHCLEPPKLGVGEFHADTDETSIEEAFRK--RAGGANTAKTADMASIMQELGADWDEDELEDALRALDPSDSGAVNFSDFVEWWSN 1968
            +V + AR  +  IG  PN+DLF  +L  +E   ++ D+ L TS+   +V+AAGDV      L                 +KAA  MG  AA +M+ G+     Y+  V H+ SRF+D++W F+G   G  EV +L  E          F   W+         GG  VG         D  SRV          +  ++L ++A EQP V+S+++L+K  +   LA+PHCLEP  LGVGEF+A+ D   I + F            K A + +IM+ELGA+WDEDEL +A +ALD   +G V F  F  WW N
Sbjct:    1 EVHVPARLTIIAIGCEPNTDLFSSTLKTTETNALLVDNTLCTSYQGRNVYAAGDVVSCGSGL------------RVGTKMKAAN-MGRHAARVMVQGETQVAPYDSGVEHLTSRFMDLTWHFFGSIEGNHEVVILDQEEDDKDTNHICFLVLWVTRREDDQSDGGSTVGRTPRGDDLRDELSRVQAVLLQGGTPEQVSVLAKIAEEQPIVVSVRKLKKLSMSHFLADPHCLEPAPLGVGEFYAEDDFDGISDVFHSFCDTNSHGQVKVAHLGAIMKELGANWDEDELAEAQQALDLQANGMVGFESFRNWWLN 300          
BLAST of mRNA_E_fasciculatus_S2_contig7.15145.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH28_9STRA)

HSP 1 Score: 168 bits (425), Expect = 1.930e-39
Identity = 150/490 (30.61%), Postives = 195/490 (39.80%), Query Frame = 1
Query:  184 TAAIVSGDPAGFAPFERPALSKTCLNPGAKGSRDFSCSSSEFPFVCKGSGG----EAHAPEWYKDNGITILSSCQAVSVDLDQKFLKVKRVTAS-NGQLVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCSCTRHPDVGGSPLACTFPDRFGFGSVHYLRDFGDTVKLVHAMGRVEADGQDTCKEPVVLIG-------------GGFISCEVAAAVATYCPGMQLVMVMPG--------------------------------EDVMSSS---------------------GFGKEVCHFYEKQLA----------------------------------------------RVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGSCMKKTFPRTFGPADPHFTDCRGVVLSNTQTGEKVWLAARFVVAGIGSVPNSDLFLKSLFLSEDGGIITDSYLRTSHPSGDVFAAGDVACVPVP 1302
            +AAIVSGDP G AP+ R  L+ T L  G  G  D                G    + H   WY  NG+ +LS  Q V  DL+Q+++  KRV    NG + + +TIKV Y +LLIAT                   G+      TR   V        FP +                        +E+DGQDTC   VV++G             G F++  VAAA+A     +++ +   G                                   +S+S                     G    +C +YE+ LA                                              R GV  A GYRV RLW +EEEG  P LE S  G  ++K+ PR +G ADP FT  RGVVL+++Q+G + WL ARFVVAG+   PNS LF  SL L+ D  I  D +LRTSH SG VFAAGDVA    P
Sbjct:  107 SAAIVSGDPEGLAPYLRAPLAATFLA-GLNGMSDEERGGEXXXXXXXXXEGAELVDGHDAAWYAANGVALLSGFQVVRCDLEQRYVVAKRVRPDGNGSVAYKETIKVSYQQLLIATXXXXXXXXXXXXXTGARCGGV------TRQGGV-------EFPLK------------------------IESDGQDTCPHSVVILGKPLQRWQPASARDGAFVAFAVAAAIAARRRDLRVTLSDAGGARAAHSQPRRPSQQCSAQHGSVQQSPRQXXXXXXLSTSQCSAQQLRGTENCCAKAADPTGLPDAICAYYERLLAPATAENLDINYFTSLFKCATLRRVPARAPAEVTAGCSHARPLRLLARAGVCVAHGYRVERLWALEEEGDLPVLEYSPAG--LRKSTPRWWGKADPFFTTTRGVVLTDSQSGSQHWLPARFVVAGMAWHPNSTLFAASLDLAPDATIRVDEHLRTSHASGAVFAAGDVASSAAP 556          
BLAST of mRNA_E_fasciculatus_S2_contig7.15145.1 vs.
Match: Monodehydroascorbate (reductase n=2 Tax=Morus notabilis TaxID=981085 RepID=W9QSU8_9ROSA)

HSP 1 Score: 160 bits (405), Expect = 4.870e-38
Identity = 161/539 (29.87%), Postives = 232/539 (43.04%), Query Frame = 1
Query:   85 EEILQYDLVALGGGVATGYWGKAIAGSLGENGRTAAIVSGDPAGFAPFERPALSKTCLNPGAKGSRDFSCSSSEFP--FVCKGSGGEAHAPEWYKDNGITILSSCQAVSVDLDQKFLKVKRVTASNGQLVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCSCTRHPDVGGSPLACTFPDRFGFGSVHYLRDFGDTVKLVHAMGRVEADGQDTCKEPVVLIGGGFISCEVAAAVATYCPGMQLVMVMPGEDVMSSSGFGKEVCHFYEKQLARVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGSCMKKTFPRTFGPADPHFTDCRGVVLSNTQTGEKVWLAARFVVAGIGSVPNSDLFLKSLFLSEDGGIITDSYLRTSHPSGDVFAAGDVACVPVPLGGNDDTSFMATTNRSEHVKAARDMGAFAAGMMLGGDDSGESYNPVPHMYSRFLDISWKFYGFARGEVCVLGMETFPTTRT--FGAFWLHGGKIVGAFLEEDPSSRVDHSAILERMAREQPAVLSIKRLRK 1689
            E+I +Y +  LGGGV+ GY  +       + G  A IVS + A  AP+ERPALSK  L         F    S  P   VC GSGG+    EWY++NGI++  + + V  DL  K L     T +NG+     TIK  Y  L+I TG+   K++D                                F       ++ YLR+  D  KL+ A+       +   K   V++GGG+I  EVAAA+        + MV P +  +    F  ++  FYE    + GV   KG  V         G                              + + V L + +      L A  VVAG+G+ P + LF K     E GGI TD + RTS    DV+A GDVA  P+ +             R    +A RD+ A   G ++      E Y+ +P+ YSR  D+SWKFYG   G+  + G +  P ++   FG +W+H GKI G FLE       + S  + ++AR QP+  +++ L K
Sbjct:  115 EKIFKYAI--LGGGVSAGYAAREFRRQGLKRGELA-IVSREAA--APYERPALSKAYL---------FQKRPSRLPDFHVCVGSGGQRLRREWYRENGISLFLNTEIVRADLASKTL-----TTANGR-----TIK--YQILIIGTGSTVLKLSD--------------------------------FGVEENVKNIFYLREISDADKLIEAI-------KTKRKGKAVIVGGGYIGLEVAAAMRIN--NFDVTMVYPEKWCLPRL-FTPKIASFYENYYDKKGVKIVKGTTVIGFNANSSNG------------------------------EVKEVRLKDGKV-----LQADIVVAGVGARPLTSLF-KGQVEEEKGGIKTDGFFRTSVS--DVYAVGDVAAFPLKMCNEMRRLEHVDHARKSAEQAVRDIKASENGELI------EEYDYLPYFYSRVFDLSWKFYGENVGDTVIFG-DYNPLSKEPKFGTYWIHKGKIKGVFLE---GGNAEESEAIAKVARAQPSAGNLEELAK 537          
BLAST of mRNA_E_fasciculatus_S2_contig7.15145.1 vs.
Match: Monodehydroascorbate (reductase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I917_KLENI)

HSP 1 Score: 156 bits (395), Expect = 1.490e-37
Identity = 158/535 (29.53%), Postives = 232/535 (43.36%), Query Frame = 1
Query:  100 YDLVALGGGVATGYWGKAIAGSLGENGRTAAIVSGDPAGFAPFERPALSKTCLNPGAKGSRDFSCSSSEFP--FVCKGSGGEAHAPEWYKDNGITILSSCQAVSVDLDQKFLKVKRVTASNGQLVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCSCTRHPDVGGSPLACTFPDRFGFGSVHYLRDFGDTVKLVHAMGRVEADGQDTCKEPVVLIGGGFISCEVAAAVATYCPGMQLVMVMPGEDVMSSSGFGKEVCHFYEKQLARVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGSCMKKTFPRTFGPADPHFTDCRGVVLSNTQTGEKVWLAARFVVAGIGSVPNSDLFLKSLFLSEDGGIITDSYLRTSHPSGDVFAAGDVACVPVPLGGNDDTSFMATTNRSEHVKAARDMGAFAAGMMLGGDDSGES---YNPVPHMYSRFLDISWKFYGFARGEVCVLGME-TFPTTRTFGAFWLHGGKIVGAFLEEDPSSRVDHSAILERMAREQPAVLSIKRLR 1686
            +  V +GGGVA GY         G      AI+S +    AP+ERPALSK  L P          + +  P    C G GG    PEWYK+NGI +    + V  DL  K L   +          G+TIK  Y +L+IATGA    + D           + G+       D  G               ++Y+R+  D  KL  AM + +          V+++GGG+I CEV A ++    G+ + +V P   +M    F  E+  FYE      G+   +G     +  ++ +G                          P+   C        + GE+  L A F+V GIG+ P   LF   L +++ GG   D   +TS P  DV+A GDVA  P+ +   + T       R EHV  AR      A   +  ++ GES   Y+ +P+ YSR   +SW FYG   G+V V G E        FGA+W++  K+VGAFLE   S   D + ++  +AR++P+V S + L+
Sbjct:    4 FKYVIVGGGVAGGYGAWEFT-KHGLQPGELAIISKEK--VAPYERPALSKGYLFPE---------NPARLPGFHTCVGGGGPKGLPEWYKENGIELKLDTEVVKADLKSKTLTTDK----------GETIK--YEKLIIATGAGVINLKDF---------KMPGA-------DADG---------------IYYIREEEDAAKLYEAMQKHKG-------AKVIVVGGGYIGCEVGAGLSLN--GLDVTIVYPEPHLMPRL-FTPEIASFYEGYYEAKGIKVFRGRLAAAI--VQHDG-------------------------QPNKIQC-----VRMKDGEE--LPADFLVVGIGARPRVGLFEGQLEMAK-GGFKVDGNFKTSEP--DVYAVGDVAAFPLKMKDGELT-------RVEHVDNAR-KSVMQAVQAIKAEEKGESIPEYDYLPYFYSRVFKLSWVFYGENVGDVVVWGREEAIKEGGKFGAYWVNDKKVVGAFLE---SGTPDDNKLMSEVARKRPSVESQEELK 425          
BLAST of mRNA_E_fasciculatus_S2_contig7.15145.1 vs.
Match: Monodehydroascorbate (reductase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TYS0_CHLSO)

HSP 1 Score: 152 bits (383), Expect = 4.920e-36
Identity = 118/334 (35.33%), Postives = 161/334 (48.20%), Query Frame = 1
Query:  667 VHYLRDFGDTVKLVHAMGRVEADGQDTCKEPVVLIGGGFISCEVAAAVATYCPGMQLVMVMPGEDVMSSSGFGKEVCHFYEKQLARVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGSCMKKTFPRTFGPADPHFTDCRGVVLSNTQTGEKVWLAARFVVAGIGSVPNSDLFLKSLFL--SEDGGIITDSYLRTSHPSGDVFAAGDVACVPVPLGGNDDTSFMATTNRSEHVKAARDMGAFAAGMMLGGDDSGESYNPVPHMYSRFLDISWKFYGFARGEVCVLGMETFPTTRTFGAFWLHGGKIVGAFLEEDPSSRVDHSAILERMAREQPA 1662
            VHYLR+  D   L+ A+   +A G        V IGGG+I  E AAA+A    G+ + MV P ED   +  F  ++  FYE+  A  G+   KG  V+                SL+G+  K T     G A                      L A  V+ G+G+ PN++LF   L L     GGI TD +LRTS+P  DV+A GDVA  P+ L G         T R EHV   R   A AA  +LG     + ++  P  YSR  ++SW+FYG + GEV   G  +      FGAFW+ GGK+VGAFLE   S   + +A ++++A+ QPA
Sbjct:  141 VHYLRNVADADALIAAIADCKAAGGKA-----VAIGGGYIGLECAAALALN--GLDVTMVFP-EDRFMARLFTPDIAAFYEQFYAGKGIKIVKGDVVS----------------SLEGADGKVTAAVLKGGAK---------------------LEANLVLVGVGARPNTELFAGQLELLAGPPGGIKTDEHLRTSNP--DVYAIGDVAAFPLKLTG--------VTTRQEHVTCCRQTAAHAAAELLG---ESKPFDYQPFFYSRVFNLSWQFYGLSEGEVVQFGDVS---AGKFGAFWVQGGKVVGAFLE---SGSPEENAAIKKVAQAQPA 410          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7.15145.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Pyr_redox_20.000e+072.71domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Pyr_redox_21.890e-9435.91domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Hypothetical2.150e-9433.24protein n=2 Tax=Pelagomonas calceolata TaxID=35677... [more]
Hypothetical5.670e-9133.74protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Hypothetical6.010e-4938.41protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Hypothetical1.120e-3934.82protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Uncharacterized1.930e-3930.61protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Monodehydroascorbate4.870e-3829.87reductase n=2 Tax=Morus notabilis TaxID=981085 Rep... [more]
Monodehydroascorbate1.490e-3729.53reductase n=1 Tax=Klebsormidium nitens TaxID=10523... [more]
Monodehydroascorbate4.920e-3635.33reductase n=1 Tax=Chlorella sorokiniana TaxID=3076... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7contigE_fasciculatus_S2_contig7:62834..70363 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score902.9
Seed ortholog evalue8.8e-260
Seed eggNOG ortholog2880.D7FRA9
Preferred nameMDAR1
Model size2482
KEGG koko:K08232
KEGG ReactionR00095
KEGG Pathwayko00053,ko01100,map00053,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001101,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005829,GO:0006950,GO:0006970,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009266,GO:0009409,GO:0009414,GO:0009415,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009607,GO:0009608,GO:0009610,GO:0009620,GO:0009628,GO:0009636,GO:0009651,GO:0009719,GO:0009725,GO:0009753,GO:0009941,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0010319,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0016656,GO:0016999,GO:0017001,GO:0017076,GO:0017144,GO:0030554,GO:0031090,GO:0031903,GO:0031967,GO:0031975,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042221,GO:0042579,GO:0042737,GO:0042743,GO:0042744,GO:0043167,GO:0043168,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043900,GO:0043903,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0050789,GO:0050896,GO:0051186,GO:0051187,GO:0051704,GO:0051707,GO:0051716,GO:0055114,GO:0065007,GO:0070887,GO:0072593,GO:0097159,GO:0097237,GO:0097367,GO:0098588,GO:0098754,GO:0098805,GO:0098869,GO:1901265,GO:1901363,GO:1901700,GO:1990748
Exons13
EggNOG free text desc.monodehydroascorbate reductase (NADH) activity
EggNOG OGsCOG0446@1,KOG1336@2759
Ec32 ortholog descriptionMonodehydroascorbate reductase-like
Ec32 orthologEc-26_002470.1
EC1.6.5.4
Cds size1971
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842358.3445125-CDS-E_fasciculatus_S2_contig7:62833..629831696842358.3445125-CDS-E_fasciculatus_S2_contig7:62833..62983Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 62834..62983 +
1696842358.360428-CDS-E_fasciculatus_S2_contig7:63567..636501696842358.360428-CDS-E_fasciculatus_S2_contig7:63567..63650Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 63568..63650 +
1696842358.3698478-CDS-E_fasciculatus_S2_contig7:64111..642471696842358.3698478-CDS-E_fasciculatus_S2_contig7:64111..64247Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 64112..64247 +
1696842358.3779035-CDS-E_fasciculatus_S2_contig7:64533..646501696842358.3779035-CDS-E_fasciculatus_S2_contig7:64533..64650Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 64534..64650 +
1696842358.3869352-CDS-E_fasciculatus_S2_contig7:65061..651571696842358.3869352-CDS-E_fasciculatus_S2_contig7:65061..65157Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 65062..65157 +
1696842358.396849-CDS-E_fasciculatus_S2_contig7:65347..655061696842358.396849-CDS-E_fasciculatus_S2_contig7:65347..65506Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 65348..65506 +
1696842358.4073796-CDS-E_fasciculatus_S2_contig7:65776..659591696842358.4073796-CDS-E_fasciculatus_S2_contig7:65776..65959Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 65777..65959 +
1696842358.4197822-CDS-E_fasciculatus_S2_contig7:66122..663201696842358.4197822-CDS-E_fasciculatus_S2_contig7:66122..66320Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 66123..66320 +
1696842358.43147-CDS-E_fasciculatus_S2_contig7:66851..671861696842358.43147-CDS-E_fasciculatus_S2_contig7:66851..67186Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 66852..67186 +
1696842358.4414237-CDS-E_fasciculatus_S2_contig7:67481..676201696842358.4414237-CDS-E_fasciculatus_S2_contig7:67481..67620Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 67482..67620 +
1696842358.449824-CDS-E_fasciculatus_S2_contig7:68282..683751696842358.449824-CDS-E_fasciculatus_S2_contig7:68282..68375Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 68283..68375 +
1696842358.4590585-CDS-E_fasciculatus_S2_contig7:68867..690021696842358.4590585-CDS-E_fasciculatus_S2_contig7:68867..69002Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 68868..69002 +
1696842358.469656-CDS-E_fasciculatus_S2_contig7:69705..698521696842358.469656-CDS-E_fasciculatus_S2_contig7:69705..69852Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7 69706..69852 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842358.4810393-UTR-E_fasciculatus_S2_contig7:69852..703631696842358.4810393-UTR-E_fasciculatus_S2_contig7:69852..70363Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7 69853..70363 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7.15145.1prot_E_fasciculatus_S2_contig7.15145.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7 62834..69852 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7.15145.1

>prot_E_fasciculatus_S2_contig7.15145.1 ID=prot_E_fasciculatus_S2_contig7.15145.1|Name=mRNA_E_fasciculatus_S2_contig7.15145.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=657bp
MSVHGRRRSSALAAQVLEAIRETDEEVFEEILQYDLVALGGGVATGYWGK
AIAGSLGENGRTAAIVSGDPAGFAPFERPALSKTCLNPGAKGSRDFSCSS
SEFPFVCKGSGGEAHAPEWYKDNGITILSSCQAVSVDLDQKFLKVKRVTA
SNGQLVFGDTIKVVYGRLLIATGARPRKIADEIKSLDNISKGLQGSCSCT
RHPDVGGSPLACTFPDRFGFGSVHYLRDFGDTVKLVHAMGRVEADGQDTC
KEPVVLIGGGFISCEVAAAVATYCPGMQLVMVMPGEDVMSSSGFGKEVCH
FYEKQLARVGVAFAKGYRVNRLWGIEEEGCFPTLERSLQGSCMKKTFPRT
FGPADPHFTDCRGVVLSNTQTGEKVWLAARFVVAGIGSVPNSDLFLKSLF
LSEDGGIITDSYLRTSHPSGDVFAAGDVACVPVPLGGNDDTSFMATTNRS
EHVKAARDMGAFAAGMMLGGDDSGESYNPVPHMYSRFLDISWKFYGFARG
EVCVLGMETFPTTRTFGAFWLHGGKIVGAFLEEDPSSRVDHSAILERMAR
EQPAVLSIKRLRKCPLEKLLANPHCLEPPKLGVGEFHADTDETSIEEAFR
KRAGGANTAKTADMASIMQELGADWDEDELEDALRALDPSDSGAVNFSDF
VEWWSN*
back to top

mRNA from alignment at E_fasciculatus_S2_contig7:62834..70363+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7.15145.1 ID=mRNA_E_fasciculatus_S2_contig7.15145.1|Name=mRNA_E_fasciculatus_S2_contig7.15145.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7530bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7:62834..70363+ (Ectocarpus fasciculatus EfasUO2)
ATGAGTGTGCACGGTCGACGTCGATCCTCGGCCCTTGCGGCTCAAGTTTT GGAGGCGATCCGAGAAACAGACGAAGAAGTTTTCGAGGAAATCCTGCAGT ATGATCTCGTCGCGCTGGGCGGAGGTGTGGCTACCGGATATTGGGGAAAG GTGAGAGTGTTGAACGCGATTGTGTAACAGGTTGACAGGGGGCGGCCACC TGCTGTGTGTAATTGCTGTACTAGGTCTTCCTCGCTACTGTAGGTACATA CAGACGTTGTTACCATACTTTTTTTTGTTGCAGAGGTGCCCTCCGCTCCT CCGCTGCGGTCTAATTACATACATACAGCGTGATGTAACCCGGATCACAT ATTTTCAATACGGGGGGGACGGGGATGCAATATCCCGGGCTCAGAAAAGG TCTGACAAGAATGTGAAAGTTTCCTCGGTGTACGTATGTATGGCCTTGGT GTTTTTAAATAGATCAAAAGTCTAGAAAAATAGTGACCGATGCGTTGCCG GTTGCCGGGGTTCAACTGGTGGAATGTGCAGAAAAAATCCTCGACGTGAG TACATTGTGCGATTGAGCTAAACCCCAGGCCAGGCCAATTTTTGGGGCGG GGAAATACGAATCGATTTTTGGTACCCACTCTAGGCACAGAATTGCAGCT GTAATTCGAAACACCCCCGACAACCCGGAGTGTTGGGGAAATGAAGAACA CTCCCTCCTTTTTGTCCTTGCTTGCAACGCATAGGCCATCGCAGGGTCTC TCGGTGAGAACGGACGTACAGCTGCAATCGTTAGTGGAGACCCTGCTGGC TTTGCTCCATTCGAAAGGTATCATTTGTGCTTCGTCTCCCCGCCCAACCT TATCCCCTTTTGCCCTCCCCCCCTCGGAAATGTGGTGAGTTCTTGTGATG GCCTCGGGTGAAAACGTGGGTGTTGTTCCCTTCTTTCGTGACATCCACAC GGCCTCCCGGGGCATTCCGTTTTTTTTTCGCACAGATCCCTGCCTCTTGC GTAGTTCTGGCGCTTCCAGAGTTCACAGTTTCTGCCAGAAACAAAGAATC TCCCCCGGGGGCCAGCACAAGGTATATTACGGCAAGTACAACACAAAGTG AAAATAGCGGGTAGACCTTGGCGCCAAATCTCTCGTGTCTCTGAGGACAG GGTTGTCTGAAGGGTGATTTGCGGGCAACCTTCTAAAGGACGTGATGGTA GGGGACGTACTATATTGGCGAACCATCCCAAACACGACGCGCATCCGCGG ATTCGACAACATACCTTTCTATTCACAGGCCAGCACTGTCCAAGACATGC CTTAATCCGGGGGCGAAGGGCTCGCGAGATTTTTCCTGCAGCTCCTCCGA ATTCCCCTTCGTCTGCAAGGGGTCTGGCGGCGAGGCCCACGCCCCAGAGT GGTACAAGGACAATGTGAGAAAGGAAACGATGGAGCATCGGGAGACTGTT GGCACTCCCACTTCTGCCTTCTATGAGGATTCCTGCTGGAACAGCTTCTA CGCGGCTATACGACCGGACGCTCTTGGCATAGCAAGACGACAAAGACACG ACCGTCGCCACAATTCGCATAACAAGACGACGAAGAAGTTCAACATCGCC CTCAATTTGTACCACTTGGTTGGTGTTTGGTCTCATGTCGTGCCCATACT CTGACCAGCGCGGGCGTGTCTCTCATGACGGCCCTTGTCCTTGACCGCAG GGCATCACCATCTTGTCCAGTTGCCAGGCAGTTTCCGTTGATCTGGACCA AAAGTTTCTGAAAGTCAAGAGAGTCACCGCCAGTAACGGCCAACTTGTCT TTGGGGATACAATCAAGGTATGGTTATTCCCAGGGCATCACACTGGACTT CGCGATAGGTTTATACTATACCAACTTAGATGGCAGCTTGCTGTATACTT CTTTTATTGTCCGTTAGTGTATTTTGCCCTCTACTGAATGTGGTCAGTCA GCTGTTGTATGCGTGCGGATTCGACGGTGTCTTTTCGATTACTGTGTTCG ATTGATTGTTGGCTTCGTTCATTCGCCCTTGCATGCACCGATGCATGGTC GTTTATCATTTACTTCTTGCCTGTGACAGCCAACTCACGAAGGCGTCTGT GACTACGTTGACCTATGCATAGTTCTATCGCATTGAATCCTAGAAGGAAT CGAACCCTCTCGAAGGATAGAAACGAACCGATAGACGATCAAGAAGATGA AGGCTTCCAACACCTGCCGATCCCGCAGGTAGTTTACGGGCGATTGTTGA TCGCTACTGGGGCAAGACCTCGGAAGATCGCCGACGAAATTAAATCCCTG GACAACATCTCAAAAGGCTTACAGGTAGGCAGTAAGCGTGCAGTAGAAGA TAAAACCTTATACATACCTTGGAGGGTGTCCGATACTAGTAGCTTGGTGT TTTTTTCAACTTAAGCATTCGTCTTGAACCGATCCGGCGGATTACCTTCG CTTTGACGAAACAAAAGCAAAATGTCTATCGTGTGTCAATGGTCCTGAAA CACCCAACCCCCAGGGAAGCTGCTCCTGCACTCGCCATCCCGACGTCGGT GGGTCCCCGCTGGCGTGCACTTTTCCCGACCGGTTCGGATTTGGGTCGGT TCACTACTTGCGCGACTTCGGAGACACCGTGAAGCTCGTCCATGCTATGG GCAGAGTTGAGGCGGACGGGCAGGTAGGCTGGATGATTCGGTTGTCGGGT AGGTAATCGTAGATTGGACGCCTTGTCTTCCCTAACATAGGCGTGGTTTA ACTCGTGTATAACGTGTTTTGCAACGTAGATAATATATAGAATTCACCGG CAAGAAACATTGTGCATCTGGCAAAAACACTGCACAGCAGAGAGCAGCTG ATTTGATGGCGCTTTCCTGTTTCTTATCAACTTTTAAAATAACTTGATGG TGATGCAATGTTCTTGCTTGTTTTACGACATGATTGCACACAGGACACCT GCAAGGAACCTGTGGTCTTGATCGGCGGCGGCTTCATATCGTGTGAAGTT GCTGCCGCTGTTGCAACATATTGCCCTGGCATGCAGCTGGTCATGGTAAT GCCTGGAGAAGACGTGATGTCAAGCTCTGGATTCGGCAAAGAAGTCTGCC ATTTCTACGAAAAACAGCTTGCGAGGGTAAGCACAGGCGTTTTTAAGCTC GGACTTCCCTTGATCCTTCATCCGCTACCTGCGTTGCCCATCTGACCGCC GTGATCTCATTAGTTGGCGCTTTGCTGCCTCTTTCTCCGTCCGCCAATAT GGCCACTGCCCCCTCCTCCGCTCTCCGTGGTTTTCGAAGGTGGGTGTTGC ATTCGCCAAGGGCTATCGCGTCAACCGCCTCTGGGGCATTGAAGAAGAAG GGTGCTTTCCTACTTTGGAGCGGTCGCTGCAGGGGTCTTGCATGAAGAAA ACGTTCCCTCGGACGTTCGGCCCGGCCGACCCGCACTTCACGGACTGTCG AGGGGTCGTGCTTTCGAACACACAGACTGGCGAGAAGGTGAGAACTCAGG GCTTGTGAGGATGGTCTCTTGCACTCCCAGGTCGGTCGAGGGTTAGAAGT GCAGCCTGCGCAACAAGACGGGACGTGAGGTTTACTCTGCCTACGGTCTC GATATGATGCACGAGGGTCCTTGTGACGCTCCAAGTACTAACGCTATAGT ACTGTTCTTAAATGTTTATGTTGTTGGTGGTGTTTAAGGAGTAGAGCAGC AGCATCTGCCTGTTTGGGGAGAGACTTCTACAACAAGGCCCAAGCGAAGG TGTCGGCTGTGTGCACAGGTATGCGCCAAATAACGTCCATCAACTGCTTC ACACTCCGTTCGCCGAATCTATTTTCTCCAAGCATAAGTTGACTCCGAGT AGCTGGCACGCACAACGCCGACAACAACTCAAGTTGTTCAACGTTCAGCT AGCAAGTGCCTTGCGTGTTCGTTTAAGGCGGCGTGCTCGAGCTATCAAGC AACATTACACACACTGTAGCCCTCACGCGCCTCGTTTCGTACTCGACATC AACCACTGCCCCGAACAGGTGTGGCTGGCAGCGCGCTTCGTCGTGGCAGG AATAGGGTCGGTCCCCAACTCTGACCTGTTTCTCAAGTCGCTCTTTTTGT CAGAGGATGGCGGCATCATCACCGACTCGTACTTGCGCACCAGCCATCCT TCCGGCGACGTGTTTGCCGCGGGAGACGTTGCTTGCGTTCCGGTGCCTCT TGGGGGAAACGACGACACAAGCTTCATGGCGACGACCAATCGATCGGAGC ACGTCAAGGCGGCGAGGGACATGGGGGCGTTTGCTGCTGGCATGATGCTG GGCGGTGACGATTCTGGCGAATCGTACAACCCTGTTCCACATATGTATTC AAGGTCGGGTCTCGCGAACGGTGACTTTGATTGTTTGCGAATGACGCGGC ATGTTTGGTGGAAGCCTGGTGTTGCAAGCGTGAAAGGCTTGGTTGCTGCC GGTGAAGAAACAAACGTCAAAATGACAATAGGAAACATTCAAGATAACTG CAACTTGTGTTTTTTCGACATAGCACGCACGTGTAGTGCACAAATACTCT TCCCTACAGGCTGCGGAAAGCCAGATGGCATTGCTCCAACAAACATGTGA GGAAGGACGCGTCTGACGTTGTCGATATGTACGTAACCTATTGCACAGAT TCTTGGACATTTCATGGAAATTTTACGGTTTCGCGAGGGGGGAAGTGTGC GTGCTCGGCATGGAAACCTTCCCGACGACAAGGACATTCGGAGCTTTCTG GCTGCATGGCGGGAAGATTGTCGGTGCGTTTCTTGAGGTGAGGTTGATAC GATGCGCCGTGGTACAGTAGCTTCGTCGATTGGTTGTGCTATGTATGTAC ACCAGCAGGTGCTTGTCGTCCTGTTTGCCTCAAGCTTTGGTGTTTCATGC TATTTCCAATTTGAACCTCCCTTGGCTAGTGGCAGACTATCGCAAGAAGT GCCAGAATGTCCCTGCTCTGAAGGGGTTGGGCCGTCGAAGAGCCCTGAGC AACGTGGCCCTGAGGAAAGCCAAACCAACACGCCCTCATGACTCTCGTGT TGACGGCACGAAAGAGCTTCGTGTAGAAATCACGACTTTTTCGCCAGATT CCGTGGGTCGGGACTAAACCACTCCATACTATACCTGAACTGAGCAAACT ACGTTTGCATTACGAAGTGGGGCTACCGACGTGTGTCTGCATTTGTCTCG GGACCAAGGCACGACAAAAGGAAACAGAACCACATTCCTGACGTCGTACG TGCAGGGTGACCTGACCTCCTCGCACCCCCTACGATTGGCGATGTGTAGC CAGTACGTCGGGAGGTATTCCTCGGCCAAAGTGCTGGTCTGGCGCTCTCA ATTCGTCAACGCAGAATACCTAGGATATCAAGAGTGTTCCAGTTTATGGC GCGTCAATACTTGATGCTTCCTCTCTATCGTGATTTCTGTCGCGCACAGG AAGACCCATCATCCCGAGTGGACCACTCTGCGATACTGGAACGAATGGCA AGAGAGCAGCCGGCGGTGTTGAGCATAAAGCGCTTGCGGAAGGTGAAATA AATTGTGCTGATTTCTCCATGAGCGTTGGGTATGCTTGGCATCGACGTCC GCTCCCTCTGGAGATGCACTGTACAGAGGGTAGGAGAGGGGGCATGTTGC TCGTACCACCTTTGTACCCGTGCATTTCAGAATCCCCTCACAGTCCGTGT TGATCCGCCGGACCTGCAGACTAGTCCGCCAACTCTTCACACTACCTACG TCGTGCCAGAGCTGGACCTTCGCCAACACCTAACAGCGTTATCGAAGGGT ATGCTCTTTTCGAATGCGGGGGTCGCCCAGTACACGTCCCCCCAAAATAA CTTCCTGATATGCATGTGAGTTCTACGCTGCACACAACAACTTGTTTATT TTTGCGGGCGAACCCACTTCTCGAAAAGTTTTATAGTCTCCCCCCACGCT GCTATGTATTTGTCACCCAAACGACCACTTCGACGCCTGTTCGAACCTTT CTCTCGTCGTACATACGATCGCATGCATCTACAGTGCCCTCTAGAAAAAC TGCTGGCGAATCCTCACTGCCTCGAGCCCCCGAAGCTAGGCGTTGGCGAG TTTCATGCAGATACGGACGAAACGAGCATCGAGGAGGCATTCCGCAAGCG TGCCGGAGGTGCCAATACGGTGAGGCGCCACACGGGCGGGGGGAGAGTGT ACTCATACTCGTAGTCGTGCATGCCGTAGTCGTTAGAACATTGACCTCGC ATCCCTACAAAGCCGGGGCGGAGCACTCCGGGTTCTCACCGGACCAGGCT CTCACATCACCAAGCGCGAAGCGCCGTGAGGTATTCGGCGAGTCGCATGA AGGGTGCGCTGCATCCTGCTCAGGGTTTTCGGCATCTTGTGCATACTTCT TTGCGCACGGATGACAGCTGCGAATTACTTAATTTACTTTCTGGTGTTTT CACTTCGCCTCGAGGGTGCTTGGCCAATTTAACACAACGTGGTGCGATCA TCCCCTTTGCGCGGAGTGAGCGTTCTCGACCCCGCGCAACATAATCTCTA CTCAACCACCTTCATGGGTGCCGCAAAACAAGCAAAGGCAGAAAAAAAGC GGTAACTTGGTTGTCGAGTTCACGAACCGATCGGCTTGTATTACAACGTC GTTTCCAAGCGACGAATACCCAACCCCGATGGCAAACACCGGCAGGGGGG AGGGGGGGGGGGATTCCGTACATGCTGGTCATGTTTGACAAAACAACGGG ACGAAGGCCACAGTAAGTAGTGCAAGATCACACAATTTGGTTTGTTGTAT TTATGTTTGACCGCTCTTGTTGGTTGTTTACCTAGTGTTAACGCATCTAA CTGCGCGCCGCCGAACACACAGGCCAAGACGGCAGACATGGCCTCCATCA TGCAAGAGCTAGGCGCAGACTGGGATGAGGACGAGCTGGAAGACGCCCTT AGAGCCTTGGACCCATCAGACTCTGGTGCTGTGAACTTCTCCGACTTTGT GGAATGGTGGTCGAACTGAGACTGCCTGTGAGACGACATGGTGGCTCCCC TTTGATGTGCATGTGTCATTTCAAAGAGGGTCTGATTTCGCGTGCAAAGA CGGCAAACTCCGGTGATCATACTGCTACTCCGGCAAAGTATTCTTTCCTG TGGTTGTTGGCATGTTGCTTGCCTCATAAGAAACGCCGGAGATGGCCTGT TCTGTTAGAAATTGACCCCCACTTTCATTGAGATCCAACGGCCGAGCGGG CTGTATGGTAGACCAAGAATTGAACCAAACCCCGTGGGAGGGGGCGGCAC AGGGCCCTTGAGGGGTTGGTGGGTGCTCCGTTTTGCAACGATTCGGCGAG GCCGCTGTTTAGTGTGCGGCGCCCCCCATACATTTGCCCGGAGGCACGAG GTTTTTCCCTCAGGTGCCTATCCCGTTCCATCCTGATGTTTGGCAATGTT ACTATTCGAACGAGAGAAGAACCGATGAGCCAGTCAACAAGACCATGTCA CCGAATGCCTACGGGGGAGAACGTTGTTTT
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7:62834..70363+

>mRNA_E_fasciculatus_S2_contig7.15145.1 ID=mRNA_E_fasciculatus_S2_contig7.15145.1|Name=mRNA_E_fasciculatus_S2_contig7.15145.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1971bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7:62834..70363+ (Ectocarpus fasciculatus EfasUO2)
ATGAGTGTGCACGGTCGACGTCGATCCTCGGCCCTTGCGGCTCAAGTTTT
GGAGGCGATCCGAGAAACAGACGAAGAAGTTTTCGAGGAAATCCTGCAGT
ATGATCTCGTCGCGCTGGGCGGAGGTGTGGCTACCGGATATTGGGGAAAG
GCCATCGCAGGGTCTCTCGGTGAGAACGGACGTACAGCTGCAATCGTTAG
TGGAGACCCTGCTGGCTTTGCTCCATTCGAAAGGCCAGCACTGTCCAAGA
CATGCCTTAATCCGGGGGCGAAGGGCTCGCGAGATTTTTCCTGCAGCTCC
TCCGAATTCCCCTTCGTCTGCAAGGGGTCTGGCGGCGAGGCCCACGCCCC
AGAGTGGTACAAGGACAATGGCATCACCATCTTGTCCAGTTGCCAGGCAG
TTTCCGTTGATCTGGACCAAAAGTTTCTGAAAGTCAAGAGAGTCACCGCC
AGTAACGGCCAACTTGTCTTTGGGGATACAATCAAGGTAGTTTACGGGCG
ATTGTTGATCGCTACTGGGGCAAGACCTCGGAAGATCGCCGACGAAATTA
AATCCCTGGACAACATCTCAAAAGGCTTACAGGGAAGCTGCTCCTGCACT
CGCCATCCCGACGTCGGTGGGTCCCCGCTGGCGTGCACTTTTCCCGACCG
GTTCGGATTTGGGTCGGTTCACTACTTGCGCGACTTCGGAGACACCGTGA
AGCTCGTCCATGCTATGGGCAGAGTTGAGGCGGACGGGCAGGACACCTGC
AAGGAACCTGTGGTCTTGATCGGCGGCGGCTTCATATCGTGTGAAGTTGC
TGCCGCTGTTGCAACATATTGCCCTGGCATGCAGCTGGTCATGGTAATGC
CTGGAGAAGACGTGATGTCAAGCTCTGGATTCGGCAAAGAAGTCTGCCAT
TTCTACGAAAAACAGCTTGCGAGGGTGGGTGTTGCATTCGCCAAGGGCTA
TCGCGTCAACCGCCTCTGGGGCATTGAAGAAGAAGGGTGCTTTCCTACTT
TGGAGCGGTCGCTGCAGGGGTCTTGCATGAAGAAAACGTTCCCTCGGACG
TTCGGCCCGGCCGACCCGCACTTCACGGACTGTCGAGGGGTCGTGCTTTC
GAACACACAGACTGGCGAGAAGGTGTGGCTGGCAGCGCGCTTCGTCGTGG
CAGGAATAGGGTCGGTCCCCAACTCTGACCTGTTTCTCAAGTCGCTCTTT
TTGTCAGAGGATGGCGGCATCATCACCGACTCGTACTTGCGCACCAGCCA
TCCTTCCGGCGACGTGTTTGCCGCGGGAGACGTTGCTTGCGTTCCGGTGC
CTCTTGGGGGAAACGACGACACAAGCTTCATGGCGACGACCAATCGATCG
GAGCACGTCAAGGCGGCGAGGGACATGGGGGCGTTTGCTGCTGGCATGAT
GCTGGGCGGTGACGATTCTGGCGAATCGTACAACCCTGTTCCACATATGT
ATTCAAGATTCTTGGACATTTCATGGAAATTTTACGGTTTCGCGAGGGGG
GAAGTGTGCGTGCTCGGCATGGAAACCTTCCCGACGACAAGGACATTCGG
AGCTTTCTGGCTGCATGGCGGGAAGATTGTCGGTGCGTTTCTTGAGGAAG
ACCCATCATCCCGAGTGGACCACTCTGCGATACTGGAACGAATGGCAAGA
GAGCAGCCGGCGGTGTTGAGCATAAAGCGCTTGCGGAAGTGCCCTCTAGA
AAAACTGCTGGCGAATCCTCACTGCCTCGAGCCCCCGAAGCTAGGCGTTG
GCGAGTTTCATGCAGATACGGACGAAACGAGCATCGAGGAGGCATTCCGC
AAGCGTGCCGGAGGTGCCAATACGGCCAAGACGGCAGACATGGCCTCCAT
CATGCAAGAGCTAGGCGCAGACTGGGATGAGGACGAGCTGGAAGACGCCC
TTAGAGCCTTGGACCCATCAGACTCTGGTGCTGTGAACTTCTCCGACTTT
GTGGAATGGTGGTCGAACTGA
back to top