prot_E_fasciculatus_S2_contig6976.15114.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig6976.15114.1
Unique Name	prot_E_fasciculatus_S2_contig6976.15114.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	295

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig6976.15114.1 vs. uniprot
Match: D8LL21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL21_ECTSI)

HSP 1 Score: 390 bits (1002), Expect = 1.450e-126
Identity = 267/296 (90.20%), Postives = 268/296 (90.54%), Query Frame = 0

Query:    1 MRMENSPGPVEVPPMTTPEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGTSPPLVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTTLIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALTTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXXP-AGAGMPGGIXXXXXXXXXXXXMNGQPNY 295
            MRMENSPGPVEVPP+T PE  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        AEGTSPPLVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDT LIVESVKDSTVCTVT DGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDAL TILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXX  AGAGMPGGI            MNGQPNY
Sbjct:    1 MRMENSPGPVEVPPVT-PEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------AEGTSPPLVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTSDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXXXXAGAGMPGGIPYGMMNGMGAPMMNGQPNY 287

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BLAST of mRNA_E_fasciculatus_S2_contig6976.15114.1 vs. uniprot
Match: A0A6H5KRS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS0_9PHAE)

HSP 1 Score: 385 bits (988), Expect = 6.750e-122
Identity = 255/293 (87.03%), Postives = 260/293 (88.74%), Query Frame = 0

Query:    3 MENSPGPVEVPPMTTPEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGTSPPLVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTTLIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALTTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXXPAGAGMPGGIXXXXXXXXXXXXMNGQPNY 295
            ME+SPGPVEVP   TPE AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EGT+PP+VPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDT LIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPS+TPQEKIR+IFTGDGVAPIKSIRSDVGDTWFVTMESEDDALTTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAA               PAGAGMPGGI            MNGQPNY
Sbjct:    1 MESSPGPVEVP-RVTPEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EGTTPPVVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPSDTPQEKIRKIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALTTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAAAAAAPYGLGAG---PAGAGMPGGIPYGMMNGMGAPMMNGQPNY 288

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BLAST of mRNA_E_fasciculatus_S2_contig6976.15114.1 vs. uniprot
Match: A0A836CHL1_9STRA (HTH La-type RNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL1_9STRA)

HSP 1 Score: 226 bits (576), Expect = 3.210e-70
Identity = 114/176 (64.77%), Postives = 143/176 (81.25%), Query Frame = 0

Query:   72 KLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTTLIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPSETPQEK-------IREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALTTILALRGKTFEGKAIKARLKSENLLRSFFPV 240
            +L+GKEL+ AL++QVEFYFSK NLQSDGFLVS+M+A  CVP++VIAQF K++ LT+D   I  +V +S+VCTVTP GI+P++K ER+TIILREIPS+TP  K       +RE+F G+G+API+ +RSDVG TWFVT  SE DA+ TILALR +TFEGK +KARLK ENLLRSFFPV
Sbjct:   47 RLEGKELVDALRQQVEFYFSKANLQSDGFLVSRMDASGCVPISVIAQFAKVRALTTDEGAIAAAVANSSVCTVTPQGIRPNLKAERHTIILREIPSDTPPAKASCCCTCVRELFAGEGMAPIRGVRSDVGATWFVTCASEADAMATILALRSRTFEGKPVKARLKGENLLRSFFPV 222

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BLAST of mRNA_E_fasciculatus_S2_contig6976.15114.1 vs. uniprot
Match: A0A7S4DKN7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKN7_HETAK)

HSP 1 Score: 224 bits (570), Expect = 2.590e-69
Identity = 114/176 (64.77%), Postives = 141/176 (80.11%), Query Frame = 0

Query:   73 LDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTTLIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALTTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQP 248
            L+G+ L  A+KKQ+EFYFS+QNLQ+DGFLVSKMNA M VP+ VIA+F KI+ LT +  +I  +++ S VC VT D IKP+ K ERNTIILREIPS TP+EK+REIFTG+G+API +IRSDVGDTWFVT+ SE  A+   LALR + FEG+ +KARLKSENLLR+F+PVP AA   P
Sbjct:   31 LEGEALREAVKKQIEFYFSRQNLQTDGFLVSKMNANMEVPITVIAEFAKIRALTREPDVIRAALEGSKVCIVTEDAIKPNFKTERNTIILREIPSNTPEEKVREIFTGEGMAPITNIRSDVGDTWFVTLGSEAAAVAACLALRERAFEGRPVKARLKSENLLRAFYPVPQAAADAP 206

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BLAST of mRNA_E_fasciculatus_S2_contig6976.15114.1 vs. uniprot
Match: A0A2P4XI52_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XI52_9STRA)

HSP 1 Score: 204 bits (518), Expect = 2.430e-58
Identity = 107/176 (60.80%), Postives = 136/176 (77.27%), Query Frame = 0

Query:   73 LDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTTLIVESVKDSTVCTV--TPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALTTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEV 246
            L+G EL  A+K+QVEFYFS+ NL +D +LVS+MN+QM VPV VI  F KI+QLT +T L+VE+V+DST+C++  + D IKP+IK ER TIILREIPS T  E++  IF G G   + S+RSDVGDTWFVTM SE +A++T+LALR KTF G AIKARLKSEN+L+SF+P   A  V
Sbjct:    9 LEGAELKQAIKRQVEFYFSRANLANDAYLVSQMNSQMYVPVEVIINFSKIKQLTDNTALLVEAVQDSTICSLNSSKDAIKPNIKSERTTIILREIPSSTKPEEVEAIFEGCG--KVASVRSDVGDTWFVTMNSESEAVSTLLALRSKTFNGAAIKARLKSENVLKSFYPTQPAENV 182

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BLAST of mRNA_E_fasciculatus_S2_contig6976.15114.1 vs. uniprot
Match: A0A0W8DNS3_PHYNI (Ammonium Transporter (Amt) Family n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DNS3_PHYNI)

HSP 1 Score: 198 bits (504), Expect = 6.780e-58
Identity = 105/175 (60.00%), Postives = 133/175 (76.00%), Query Frame = 0

Query:   74 DGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTTLIVESVKDSTVCTV--TPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALTTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEV 246
            +G EL  A+K+QVEFYFS+ NL +D +LVS+MN+QM VPV VI  F KI+QLT D  L+V++V+DSTVC++  + D IKP+IK ER TIILREIPS T  E++  IF G G   + S+RSDVGDTWFVTM SE +A++T+LALR KTF G  IKARLKSEN+L+SF+P   A  V
Sbjct:   10 EGAELKEAIKRQVEFYFSRANLANDAYLVSQMNSQMYVPVEVIINFSKIKQLTDDKALLVDAVQDSTVCSLNSSKDAIKPNIKSERTTIILREIPSSTKPEEVGAIFEGCG--KVASVRSDVGDTWFVTMNSESEAVSTLLALRSKTFNGAPIKARLKSENVLKSFYPTQPAENV 182

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BLAST of mRNA_E_fasciculatus_S2_contig6976.15114.1 vs. uniprot
Match: A0A0P1AUF3_PLAHL (La-related protein 4 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AUF3_PLAHL)

HSP 1 Score: 196 bits (498), Expect = 2.500e-57
Identity = 105/180 (58.33%), Postives = 133/180 (73.89%), Query Frame = 0

Query:   69 PEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTTLIVESVKDSTVCTVTP--DGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALTTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEV 246
            P   L+G EL  A+K+QVEFYFS+ NL +D +LVS+MN+QM VPV VI  F KI+QLT +T L+VE+V+DSTVC+++   D IKP+IK ER TIILREIPS T  E++  IF   G   +  +RSDVGDTWF+TM SE +A+ T+LALR KT  G AIKARLKSEN+L+SF+P   A  V
Sbjct:    5 PVKALEGAELKEAIKRQVEFYFSRSNLANDAYLVSQMNSQMYVPVEVIINFSKIKQLTDNTMLLVEAVQDSTVCSLSSSKDAIKPNIKSERTTIILREIPSSTKPEEVEAIFKDCG--KVIGVRSDVGDTWFITMSSEAEAVDTLLALRSKTLNGAAIKARLKSENILKSFYPTQPAENV 182

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BLAST of mRNA_E_fasciculatus_S2_contig6976.15114.1 vs. uniprot
Match: A0A024TXK9_9STRA (HTH La-type RNA-binding domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXK9_9STRA)

HSP 1 Score: 199 bits (507), Expect = 8.160e-57
Identity = 108/172 (62.79%), Postives = 130/172 (75.58%), Query Frame = 0

Query:   73 LDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTTLIVESVKDSTVCTVTPDG--IKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALTTILALRGKTFEGKAIKARLKSENLLRSFFPVPT 242
            L G  L  ALK QVEFYFSK NL +D FLVS+MN+QM VPV VI  F KI+ LT+D  L+V+S+KDSTVC+++P+G  IKP+IK ERNTIILREIPS T  + +  IF G G   + S+RSDVGDTWFVTM +E+DA+ T+LALR KTF    IKARLKSEN+LRSF P  T
Sbjct:    7 LSGDALKEALKSQVEFYFSKANLVNDTFLVSQMNSQMYVPVDVIVGFSKIKALTTDVALVVDSIKDSTVCSLSPEGDAIKPNIKSERNTIILREIPSATDPKDVEAIFEGCGT--VASVRSDVGDTWFVTMATEEDAVNTLLALRSKTFHDAPIKARLKSENVLRSFLPEST 176

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BLAST of mRNA_E_fasciculatus_S2_contig6976.15114.1 vs. uniprot
Match: G4YGZ8_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4YGZ8_PHYSP)

HSP 1 Score: 201 bits (510), Expect = 1.560e-56
Identity = 105/178 (58.99%), Postives = 134/178 (75.28%), Query Frame = 0

Query:   71 VKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTTLIVESVKDSTVCTVTP--DGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALTTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEV 246
            +  +G EL  A+K+QVEFYFS+ NL +D +LVS+MN+QM VPV VI  F KI+QLT D  L+VE+V+DST+C++    D IKP+IK ER TIILREIPS T  E++  IF  DG   + S+RSDVGDTWFVTM +E +A++T+LALR KTF G AIKARLKSEN+L+SF+P   A  V
Sbjct:   23 IPTEGAELKEAIKRQVEFYFSRANLANDAYLVSQMNSQMYVPVEVIINFSKIKQLTDDAALLVEAVQDSTICSLNSAKDAIKPNIKSERTTIILREIPSSTKPEEVEAIF--DGCGKVASVRSDVGDTWFVTMNTEAEAVSTLLALRSKTFNGAAIKARLKSENVLKSFYPSQPAENV 198

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BLAST of mRNA_E_fasciculatus_S2_contig6976.15114.1 vs. uniprot
Match: A0A8K1FJK8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJK8_PYTOL)

HSP 1 Score: 199 bits (506), Expect = 3.950e-56
Identity = 110/182 (60.44%), Postives = 135/182 (74.18%), Query Frame = 0

Query:   72 KLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTTLIVESVKDSTVCTV--TPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALTTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAA 251
            KL G+EL  A+K+QVEFYFS+ NL +D +LVS+MN+QM VPV  I  F KI+QLT    L+VE+V DSTV ++  T D IKP+IK ERNTIILREIPS T  E+++ IF G G   + ++RSDVGDTWFVTM SEDDA+ T+LALR KTF    IKARLKSENLLRSF+P     +V+P  A
Sbjct:    9 KLVGEELKKAIKQQVEFYFSRANLANDAYLVSQMNSQMYVPVDTIIAFGKIKQLTESAALLVEAVADSTVVSLNETKDAIKPTIKSERNTIILREIPSATQPEEVKAIFEGSG--EVVNVRSDVGDTWFVTMASEDDAVKTLLALRSKTFNNAPIKARLKSENLLRSFYPT---QQVEPVVA 185

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig6976.15114.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig6976.15114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LL21_ECTSI	1.450e-126	90.20	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KRS0_9PHAE	6.750e-122	87.03	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836CHL1_9STRA	3.210e-70	64.77	HTH La-type RNA-binding domain-containing protein ...	[more]
A0A7S4DKN7_HETAK	2.590e-69	64.77	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A2P4XI52_9STRA	2.430e-58	60.80	Uncharacterized protein n=1 Tax=Phytophthora palmi...	[more]
A0A0W8DNS3_PHYNI	6.780e-58	60.00	Ammonium Transporter (Amt) Family n=1 Tax=Phytopht...	[more]
A0A0P1AUF3_PLAHL	2.500e-57	58.33	La-related protein 4 n=1 Tax=Plasmopara halstedii ...	[more]
A0A024TXK9_9STRA	8.160e-57	62.79	HTH La-type RNA-binding domain-containing protein ...	[more]
G4YGZ8_PHYSP	1.560e-56	58.99	Uncharacterized protein n=5 Tax=Phytophthora TaxID...	[more]
A0A8K1FJK8_PYTOL	3.950e-56	60.44	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006630	La-type HTH domain	SMART	SM00715	la	coord: 76..156 e-value: 3.4E-17 score: 73.1
IPR006630	La-type HTH domain	PFAM	PF05383	La	coord: 82..137 e-value: 2.1E-18 score: 66.1
IPR006630	La-type HTH domain	PROSITE	PS50961	HTH_LA	coord: 72..161 score: 19.451
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 69..159 e-value: 2.5E-24 score: 86.7
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 160..233 e-value: 2.2E-5 score: 26.6
None	No IPR available	PANTHER	PTHR22792:SF76	LARP (RNA BINDING LA RELATED PROTEIN) HOMOLOG	coord: 37..207
None	No IPR available	PANTHER	PTHR22792	LUPUS LA PROTEIN-RELATED	coord: 37..207
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 158..231 score: 9.951
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 150..235
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 74..162

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig6976	contig	E_fasciculatus_S2_contig6976:160..2742 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig6976.15114.1	mRNA_E_fasciculatus_S2_contig6976.15114.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig6976 160..2742 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig6976.15114.1 ID=prot_E_fasciculatus_S2_contig6976.15114.1|Name=mRNA_E_fasciculatus_S2_contig6976.15114.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=295bp
MRMENSPGPVEVPPMTTPEVAAAAAGGAAAAAATVITKAAGASDEVAASS
PAAAAAAPPAEGTSPPLVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGF
LVSKMNAQMCVPVAVIAQFHKIQQLTSDTTLIVESVKDSTVCTVTPDGIK
PSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVT
MESEDDALTTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTA
AAAAAAPYGMGGGGGGPAGAGMPGGIPYGMMNGMGAPMMNGQPNY

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036390	WH_DNA-bd_sf
IPR035979	RBD_domain_sf
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR036388	WH-like_DNA-bd_sf
IPR006630	La_HTH