prot_E_fasciculatus_S2_contig6974.15113.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6974.15113.1
Unique Nameprot_E_fasciculatus_S2_contig6974.15113.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length78
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig6974.15113.1 vs. uniprot
Match: D7FT33_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT33_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 3.080e-10
Identity = 41/47 (87.23%), Postives = 41/47 (87.23%), Query Frame = 0 
Query:    1 MAEQKREKEERQKENLPKDRNFELEQ------RGPASEKPRARSDSA 41
            MAEQKREKEERQKENLPKDRNFELEQ      RGPASEKPRARSDSA
Sbjct:  272 MAEQKREKEERQKENLPKDRNFELEQTRLPRWRGPASEKPRARSDSA 318
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6974.15113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT33_ECTSI3.080e-1087.23Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6974contigE_fasciculatus_S2_contig6974:1049..1888 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6974.15113.1mRNA_E_fasciculatus_S2_contig6974.15113.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6974 142..4198 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6974.15113.1 ID=prot_E_fasciculatus_S2_contig6974.15113.1|Name=mRNA_E_fasciculatus_S2_contig6974.15113.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=78bp
MAEQKREKEERQKENLPKDRNFELEQRGPASEKPRARSDSATRQNSSSAS
RRPERRRRPREARWGEEAAAAGTSCLR*
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