mRNA_E_fasciculatus_S2_contig6929.15065.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig6929.15065.1
Unique NamemRNA_E_fasciculatus_S2_contig6929.15065.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6929.15065.1 vs.
Match: MEKK (and related serine/threonine protein kinases amardillo repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLC1_ECTSI)

HSP 1 Score: 454 bits (1167), Expect = 2.470e-146
Identity = 230/234 (98.29%), Postives = 232/234 (99.15%), Query Frame = 1
Query:   85 VDEDLENQVLQCMFYLCRISRKRQEKAARAGLIPHLRRCVLEQSRLKQFALQMVCDFAHTSGVVRSLMWDEGVLDFYLSVMRSPKDTHWHVTIFRSLCAWLSSEGETERVAGRLVEPLNLDKVIFLFCTAQQVDFEEVVDKMHLMMVKSQTLVKALGSSATFIVEVMERLHYPKAVVGKTLLGMLRMIHHQHPDPAALVRDFDLYRIVLTLSRNESQVLVAELAGQLLQDFGRG 786
            VDEDLENQVLQCMFYLCRISRKRQEKAARAGLIPHLRRCVLEQSRLKQFALQMVCDFAHTSGVVRSLMWDEGVLDFYLSVMRSPKDTHWHVTIFRSLCAWLSSEGETERVAGRLVEPLNLDKVI LFCTAQQVDFEEVVDK+HLMMVKSQTLVKALGSSATFIVEVMERLHYPKAVVGKTLLGMLRMIHHQHPDPAALVRDFDLYRIVLTL+RNESQVLVAELAGQLLQDF RG
Sbjct: 1038 VDEDLENQVLQCMFYLCRISRKRQEKAARAGLIPHLRRCVLEQSRLKQFALQMVCDFAHTSGVVRSLMWDEGVLDFYLSVMRSPKDTHWHVTIFRSLCAWLSSEGETERVAGRLVEPLNLDKVICLFCTAQQVDFEEVVDKLHLMMVKSQTLVKALGSSATFIVEVMERLHYPKAVVGKTLLGMLRMIHHQHPDPAALVRDFDLYRIVLTLARNESQVLVAELAGQLLQDFDRG 1271          
BLAST of mRNA_E_fasciculatus_S2_contig6929.15065.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZS1_9PHAE)

HSP 1 Score: 386 bits (992), Expect = 2.670e-123
Identity = 199/213 (93.43%), Postives = 204/213 (95.77%), Query Frame = 1
Query:  154 QEKAARAGLIPHLR-RCVLEQSRLKQFALQMVCDFAHTSGVVRSLMWDEGVLDFYLSVMRSPKDTHWHVTIFRSLCAWLSSEGETERVAGRLVEPLNLDKVIFLFCTAQQVDFEEVVDKMHLMMVKSQTLVKALGSSATFIVEVMERLHYPKAVVGKTLLGMLRMIHHQHPDPAALVRDFDLYRIVLTLSRNESQVLVAELAGQLLQDFGRGG 789
            +++ A A L   LR RCVLEQSRLKQFALQMVCDFAHTSGVVRSLMWDEGVLDFYLSVMRSPKDTHWHVTIFRSLCAWLSSEGET+RVAGRLVEPLNLDKVIFLFCTAQQVDFEEVVDK+HLMMVKSQTLVKALGSSATFIVEVMERLHYPKAVVGKTLL MLRMIHHQHPDPA LVRDFDLYRIVLTLSRNESQVLVAELAGQLLQDFGRGG
Sbjct:  784 EQRGAAAVLTRILRTRCVLEQSRLKQFALQMVCDFAHTSGVVRSLMWDEGVLDFYLSVMRSPKDTHWHVTIFRSLCAWLSSEGETDRVAGRLVEPLNLDKVIFLFCTAQQVDFEEVVDKLHLMMVKSQTLVKALGSSATFIVEVMERLHYPKAVVGKTLLSMLRMIHHQHPDPATLVRDFDLYRIVLTLSRNESQVLVAELAGQLLQDFGRGG 996          
BLAST of mRNA_E_fasciculatus_S2_contig6929.15065.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C999_9STRA)

HSP 1 Score: 277 bits (708), Expect = 1.100e-89
Identity = 137/230 (59.57%), Postives = 175/230 (76.09%), Query Frame = 1
Query:   88 DEDLENQVLQCMFYLCRISRKRQEKAARAGLIPHLRRCVLEQSRLKQFALQMVCDFAHTSGVVRSLMWDEGVLDFYLSVMRSPKDTHWHVTIFRSLCAWLSSEGETERVAGRLVEPLNLDKVIFLFCTAQQVDFEEVVDKMHLMMVKSQTLVKALGSSATFIVEVMERLHYPKAVVGKTLLGMLRMIHHQHPDPAALVRDFDLYRIVLTLSRNESQVLVAELAGQLLQDF 777
            D+D+E+QV+QCMFYLCRISRKRQE+AA AGL+PHL+RC+ E S+++QFAL+++CD AHTS  VR ++W    ++FY+S++   +D HWHVT  RSL AWL ++  TERV  RLV P  L +VI LFCTAQQ DFE+VV+++H MM KS  LVKA G S  F+ EV  RLHYPKA+VGKTLL MLR+I+  HP P  L R F+LY  V+ L+RN +QVLVAE+A  LLQD 
Sbjct:   63 DKDMESQVIQCMFYLCRISRKRQERAATAGLVPHLQRCINEDSQVQQFALEIICDLAHTSAPVRDILWQHDCVEFYMSIISHARDKHWHVTALRSLSAWLLND--TERVESRLVAPNALAQVISLFCTAQQADFEKVVEELHTMMQKSMLLVKAFGVSEVFVQEVKARLHYPKAMVGKTLLAMLRLIYRNHPKPRELDRRFNLYPTVVKLARNNAQVLVAEMATLLLQDI 290          
BLAST of mRNA_E_fasciculatus_S2_contig6929.15065.1 vs.
Match: Protein (kinase domain-containing protein n=2 Tax=Pseudozyma flocculosa TaxID=84751 RepID=A0A061HAM2_9BASI)

HSP 1 Score: 160 bits (405), Expect = 7.770e-41
Identity = 86/225 (38.22%), Postives = 137/225 (60.89%), Query Frame = 1
Query:   94 DLENQVLQCMFYLCRISRKRQEKAARAGLIPHLRRCVLEQSRLKQFALQMVCDFAHTSGVVRSLMWDEGVLDFYLSVMRSPKDTHWHVTIFRSLCAWLSSEGETERVAGRLVEPLNLDKVIFLFCTAQQVDFEEVVDKMHLMMVKSQTLVKALGSSATFIVEVMERLHYPKAVVGKTLLGMLRMIHHQHPDPAALVRDFDLYRIVLTLSRNESQVLVAELAGQLL 768
            ++ NQVL  M+ LCR+S+ RQE+AA +G+IP L R    +S LKQFAL ++CD AHT    R L+W    L FY+ ++  P   +W V+   S+  WL  + ET RV   L++P ++D ++ LF T++   FE +++    +   S  +  A+G ++ F+ ++++RL +PKAVV   LL + +M+   HPD   L++ F LY I+  LS+++  VLV ELA  +L
Sbjct: 1311 EMSNQVLNAMYNLCRLSKSRQEEAAESGIIPQLLRVAQTKSPLKQFALPILCDLAHTGKGTRQLLWQHRALHFYVGLLEDP---YWQVSALDSIHVWL--QDETHRVEEVLLQPSSVDSLLCLFATSKANSFENLLEPYLKICRLSTAITIAMGKNSAFLRKLVDRLKHPKAVVRLNLLRLTKMVCDVHPDRGTLIQQFSLYEIIDQLSKHDGAVLVRELARDIL 1530          
BLAST of mRNA_E_fasciculatus_S2_contig6929.15065.1 vs.
Match: Ste (ste11 cdc15 protein kinase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ANM5_PLAHL)

HSP 1 Score: 157 bits (397), Expect = 8.470e-40
Identity = 91/229 (39.74%), Postives = 142/229 (62.01%), Query Frame = 1
Query:   91 EDLENQVLQCMFYLCRISRKRQEKAARAGLIPHLRRCVLEQSRLKQFALQMVCDFAHTSGVVRSLMWDEGVLDFYLSVMRSPKDTHWHVTIFRSLCAWLSSEGETERVAGRLVEPLNLDKVIFLFCTAQQVDFEEVVDKMHLMMVKSQTLVKALGSSATFIVEVMERLHY-PKAVVGKTLLGMLRMIHHQHPDPAALVRDFDLYRIVLTLSRNE-SQVLVAELAGQLLQ 771
            +D+EN VLQ MFYLCRI+R RQ  AA+AG+IP L + V   S LKQFAL ++CD AH S   R+ +W    +  +L+++   +D +W +   +S+  WL  +  T ++   L+ P NL K++  F  A   +FE +++ +  +M +S  L +ALG S  F++E++ RL    KA+V K LL ML+ +   H  PA  + +++L+ IV TL+++E S +LV E+A QLLQ
Sbjct:  967 KDVENIVLQSMFYLCRINRNRQTHAAQAGVIPSLIKVVKNASPLKQFALPILCDLAHASPTARAHLWTYDSVTLFLALL---EDRYWQIDAIKSISVWLVHD--TMKMENVLLAPTNLMKIMICFHNALDTEFENLLEPLLEIMNRSVRLNQALGRSGIFVLEILTRLRLMSKAIVRKNLLKMLKSLFESHTSPARFIVEYNLHPIVYTLAQDENSMILVKEIASQLLQ 1190          
BLAST of mRNA_E_fasciculatus_S2_contig6929.15065.1 vs.
Match: STE/STE11/CDC15 (protein kinase n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FCP3_9STRA)

HSP 1 Score: 155 bits (391), Expect = 5.110e-39
Identity = 82/227 (36.12%), Postives = 139/227 (61.23%), Query Frame = 1
Query:   91 EDLENQVLQCMFYLCRISRKRQEKAARAGLIPHLRRCVLEQSRLKQFALQMVCDFAHTSGVVRSLMWDEGVLDFYLSVMRSPKDTHWHVTIFRSLCAWLSSEGETERVAGRLVEPLNLDKVIFLFCTAQQVDFEEVVDKMHLMMVKSQTLVKALGSSATFIVEVMERLHYPKAVVGKTLLGMLRMIHHQHPDPAALVRDFDLYRIVLTLSRNESQVLVAELAGQLLQ 771
            +D++N VL  MFYLCRI+R RQ  AA+AGLIP+L+R    +S LKQF L ++CD A  S   R  +W    + F+L+++    D  W +   +++ AWL  +  T ++   L+ P ++ +++  F TA+   FE +++ +  ++ +S  + +ALG S+ F++E++ RL YPK  V K LL ML+ I   H  P   + +F+++  +L L++  +Q+L+ E+A QLLQ
Sbjct:  776 KDIQNIVLHAMFYLCRINRNRQTHAAQAGLIPYLQRVTQTRSPLKQFVLPIMCDLASASATAREHLWACDGVTFFLTLL---SDKFWQIDAMKAIAAWLVHD--TVKIENVLLAPEHIQQIVLCFRTAEH-QFENLLESLLEILSRSMRMNQALGRSSLFVMEILYRLSYPKPFVRKNLLKMLKCIFESHTAPVQFLVEFNIHPTILALAQETNQILIQEIASQLLQ 996          
BLAST of mRNA_E_fasciculatus_S2_contig6929.15065.1 vs.
Match: Protein (kinase domain-containing protein (Fragment) n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z5J0_PHYSP)

HSP 1 Score: 152 bits (385), Expect = 3.310e-38
Identity = 89/229 (38.86%), Postives = 140/229 (61.14%), Query Frame = 1
Query:   91 EDLENQVLQCMFYLCRISRKRQEKAARAGLIPHLRRCVLEQSRLKQFALQMVCDFAHTSGVVRSLMWDEGVLDFYLSVMRSPKDTHWHVTIFRSLCAWLSSEGETERVAGRLVEPLNLDKVIFLFCTAQQVDFEEVVDKMHLMMVKSQTLVKALGSSATFIVEVMERLHY-PKAVVGKTLLGMLRMIHHQHPDPAALVRDFDLYRIVLTLSRNE-SQVLVAELAGQLLQ 771
            +++EN VLQ MFYLCRI+R RQ  AA+AG+IP L + V   S LKQFAL ++CD AH S   R+ +W    +  +L ++   +D +W +   +S+  WL  +  T ++   L+ P NL K++  F  AQ  + E +++ +  +M +S  L +ALG S  F++E+++RL   PKA+V K LL ML+ +   H  P   + +++L  IV  L+++E S +LV E+A QLLQ
Sbjct:  869 KEVENIVLQSMFYLCRINRNRQTHAAQAGVIPSLIKVVRNSSPLKQFALPILCDLAHASPTARAHLWTYDSVTLFLELL---EDKYWQIDAIKSISVWLVHD--TVKMENVLLVPENLLKIMLCFHNAQDTELENLLEPLLEIMSRSVRLNQALGRSGMFVMEILKRLRIIPKAIVRKNLLKMLKSLFESHTSPIQFLVEYNLRPIVYALAQDENSMILVKEIASQLLQ 1092          
BLAST of mRNA_E_fasciculatus_S2_contig6929.15065.1 vs.
Match: Ser/thr (kinase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VYP2_9STRA)

HSP 1 Score: 152 bits (385), Expect = 3.330e-38
Identity = 83/229 (36.24%), Postives = 145/229 (63.32%), Query Frame = 1
Query:   91 EDLENQVLQCMFYLCRISRKRQEKAARAGLIPHLRRCVLEQSRLKQFALQMVCDFAHTSGVVRSLMWDEGVLDFYLSVMRSPKDTHWHVTIFRSLCAWLSSEGETERVAGRLVEPLNLDKVIFLFCTAQQVDFEEVVDKMHLMMVKSQTLVKALGSSATFIVEVMERLHY-PKAVVGKTLLGMLRMIHHQHPDPAALVRDFDLYRIVLTLSRNESQ-VLVAELAGQLLQ 771
            +++EN +LQ MFYLCRI+RKRQ  AA+AG+IP L + + E S LKQFAL ++CD  + S   R+ +W    +  +L+++   +DT+WH+   ++L  WL  +  T ++   L+ P++  K++  F  AQ  + +++++ +  +M +S  L +A G S  F++E ++RLH  PKA+V K L+ M++++   H  P   V +++LY IV  L+++ +  +LV E+A QLL+
Sbjct:  889 KEVENVILQSMFYLCRINRKRQTHAAQAGVIPSLAKVIKEGSPLKQFALPILCDLIYASPTARNHLWVHNCVSLFLNLL---EDTYWHMDAIKALSVWLVHD--TLQMENVLLLPIHFSKLLQAFHRAQDAEMDKLLEPLLEIMTRSVRLNQAFGRSGLFVMEALDRLHLAPKAIVKKHLIRMIQVLFESHSAPLHFVVEYNLYPIVFALAQDANNLILVKEIASQLLE 1112          
BLAST of mRNA_E_fasciculatus_S2_contig6929.15065.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VLV2_9STRA)

HSP 1 Score: 152 bits (385), Expect = 3.390e-38
Identity = 90/229 (39.30%), Postives = 139/229 (60.70%), Query Frame = 1
Query:   91 EDLENQVLQCMFYLCRISRKRQEKAARAGLIPHLRRCVLEQSRLKQFALQMVCDFAHTSGVVRSLMWDEGVLDFYLSVMRSPKDTHWHVTIFRSLCAWLSSEGETERVAGRLVEPLNLDKVIFLFCTAQQVDFEEVVDKMHLMMVKSQTLVKALGSSATFIVEVMERLHY-PKAVVGKTLLGMLRMIHHQHPDPAALVRDFDLYRIVLTLSRNE-SQVLVAELAGQLLQ 771
            +++EN VLQ MFYLCRI+R RQ  AA+AG+IP L + V   S LKQFAL ++CD AH S   R+ +W       +L ++   +D +W +   +S+  WL  +  T ++   L+ P NL K++  F  A   +FE V++ +  +M +S  L +ALG S  F++E+++RL   PKA+V K LL ML+ +   H  P   + +++L  IV  L+++E S +LV E+A QLLQ
Sbjct:  986 KEVENIVLQSMFYLCRINRNRQTHAAQAGVIPSLIKVVQNCSPLKQFALPILCDLAHASPTARAHLWTYNSATLFLELL---EDKYWQIDAVKSISVWLVHD--TVKMENVLLVPENLMKIVVCFHNAMDTEFENVLEPLLEIMSRSVRLNQALGRSGMFVMEILKRLRLIPKAIVRKNLLKMLKSLFESHTSPIQFLVEYNLRPIVYELAQDENSMILVKEIASQLLQ 1209          
BLAST of mRNA_E_fasciculatus_S2_contig6929.15065.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JIH6_9STRA)

HSP 1 Score: 150 bits (378), Expect = 7.240e-38
Identity = 87/231 (37.66%), Postives = 138/231 (59.74%), Query Frame = 1
Query:   91 EDLENQVLQCMFYLCRISRKRQEKAARAGLIPHLRRCVLEQSRLKQFALQMVCDFAHTSGVVRSLMWDEGVLDFYLSVMRSPKDTHWHVTIFRSLCAWLSSEGETERVAGRLVEPLNLDKVIFLFCTAQQVDFEEVVDKMHLMMVKSQTLVKALGSSATFIVEVMERLHY-PKAVVGKTLLGMLRMIHHQHPDPAALVRDFDLYRIVLTLSRNE-SQVLVAELAGQLLQDF 777
            +++EN VLQ MFYLCRI+R RQ  AA+AG+IP L + V   S LKQFAL ++CD AH S   R+ +W    +  +L ++   +D +W +   +S+  WL  +  T ++   L+ P NL K++  F  A   + E +++ +  +M +S  L +A G S  F++E+++RL   PKA+V K LL ML+ +   H  P   + +++L  IV  L+++E S +LV E+A QLLQ  
Sbjct:  365 KEVENIVLQSMFYLCRINRNRQTHAAQAGVIPSLIKVVRNSSPLKQFALPILCDLAHASPTARAHLWTYDSVSLFLELL---EDKYWQIDAIKSISVWLVHD--TVKMENILLIPANLIKIMVCFRNALDTELENLLEPLLEIMSRSVRLNQAFGRSGMFVLEILKRLRLIPKAIVRKNLLKMLKYLFEVHTSPVQFLAEYNLRPIVYALAQDENSMILVKEIASQLLQSI 590          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6929.15065.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
MEKK2.470e-14698.29and related serine/threonine protein kinases amard... [more]
Uncharacterized2.670e-12393.43protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.100e-8959.57protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Protein7.770e-4138.22kinase domain-containing protein n=2 Tax=Pseudozym... [more]
Ste8.470e-4039.74ste11 cdc15 protein kinase n=1 Tax=Plasmopara hals... [more]
STE/STE11/CDC155.110e-3936.12protein kinase n=4 Tax=Aphanomyces astaci TaxID=11... [more]
Protein3.310e-3838.86kinase domain-containing protein (Fragment) n=4 Ta... [more]
Ser/thr3.330e-3836.24kinase putative n=1 Tax=Albugo laibachii Nc14 TaxI... [more]
Protein3.390e-3839.30kinase domain-containing protein n=1 Tax=Peronospo... [more]
Uncharacterized7.240e-3837.66protein n=3 Tax=Phytophthora kernoviae TaxID=32545... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6929contigE_fasciculatus_S2_contig6929:974..3282 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score457.6
Seed ortholog evalue4.1e-126
Seed eggNOG ortholog2880.D8LLC1
Preferred nameCDC15
Model size824
KEGG koko:K06683
KEGG Pathwayko04111,ko04113,ko04392,map04111,map04113,map04392
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.MAP kinase kinase kinase activity
EggNOG OGsKOG0198@1,KOG0198@2759
EC2.7.11.1
Cds size822
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842350.146758-CDS-E_fasciculatus_S2_contig6929:973..11701696842350.146758-CDS-E_fasciculatus_S2_contig6929:973..1170Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6929 974..1170 +
1696842350.157667-CDS-E_fasciculatus_S2_contig6929:1800..19861696842350.157667-CDS-E_fasciculatus_S2_contig6929:1800..1986Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6929 1801..1986 +
1696842350.1665063-CDS-E_fasciculatus_S2_contig6929:2408..25711696842350.1665063-CDS-E_fasciculatus_S2_contig6929:2408..2571Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6929 2409..2571 +
1696842350.175201-CDS-E_fasciculatus_S2_contig6929:3004..32801696842350.175201-CDS-E_fasciculatus_S2_contig6929:3004..3280Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6929 3005..3280 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6929.15065.1prot_E_fasciculatus_S2_contig6929.15065.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig6929 974..3280 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig6929.15065.1

>prot_E_fasciculatus_S2_contig6929.15065.1 ID=prot_E_fasciculatus_S2_contig6929.15065.1|Name=mRNA_E_fasciculatus_S2_contig6929.15065.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=274bp
AAASSSQAKPPPPTAAAVGVLGAAGGGGVDEDLENQVLQCMFYLCRISRK
RQEKAARAGLIPHLRRCVLEQSRLKQFALQMVCDFAHTSGVVRSLMWDEG
VLDFYLSVMRSPKDTHWHVTIFRSLCAWLSSEGETERVAGRLVEPLNLDK
VIFLFCTAQQVDFEEVVDKMHLMMVKSQTLVKALGSSATFIVEVMERLHY
PKAVVGKTLLGMLRMIHHQHPDPAALVRDFDLYRIVLTLSRNESQVLVAE
LAGQLLQDFGRGGQGDAVDTGGGG
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mRNA from alignment at E_fasciculatus_S2_contig6929:974..3282+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig6929.15065.1 ID=mRNA_E_fasciculatus_S2_contig6929.15065.1|Name=mRNA_E_fasciculatus_S2_contig6929.15065.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2309bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6929:974..3282+ (Ectocarpus fasciculatus EfasUO2)
GCCGCGGCCTCCTCCTCCCAAGCAAAACCACCACCACCAACGGCCGCGGC AGTAGGCGTTCTGGGAGCAGCGGGGGGCGGCGGGGTTGACGAGGATCTTG AGAACCAGGTCCTTCAGTGCATGTTCTACCTGTGCAGGATCAGCCGGAAG CGACAGGAGAAGGCCGCCCGCGCGGGGCTCATTCCTCACCTTCGAAGGCG AGATGTTGTTGGTTTTTGTTTTTTTAGGGATTGGGGTGGCGGTGGGGTTT CGAAGGCGTGCGGCTAGGATGCGAGGCAGGACCGGGGCGGGGGCAGGTGT ACGTGTCTTTGTACAGGCGGTGTGTGGCGAAGGCTGCCAAGTAGGGAACG GTGGACGGCTTGCCGACTGCTTCGTGGAGGAGCCAAGCACTGTATTCGGT TCAAAGTTAGATGTTCTGTTTCAAGAGTATGTGCTCTTGGAGAGTGTTTC TTAGGGGTCGGAGGGGGTTGGGTGGGAGCTTGCCTTAGCCGCCCGTTGTC GCGTGTCTTTGCTCATCTTGCACACTCCGAGCTTCATCTGTAAGTCGCAA ATCGTTTTGTTCGGCGCATGTAGTAAACCTTGGTTACTTTACTTTGCAGT TCAGCGTGCAACACATTTCTTCCCAAGTATGAACCTCCCTCCGCCCCCCC CCCTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCG CCCCCGGCGGGGGCGCGGGCCCGGCGCCGACCGAGGGCGCNNNNNNNNNN CCCATTTTAGACCTCCCCCCCCCCCCCCCCTTCCCCCCCCCCCCCCCCTC CGGCCTGCTTGCTCTCCGGCGAAACAGGTGCGTGCTGGAGCAGTCGCGGC TGAAGCAGTTCGCCCTCCAGATGGTGTGTGACTTCGCCCACACGTCGGGC GTGGTCCGGAGCTTGATGTGGGACGAGGGGGTGCTGGACTTCTACCTGTC GGTCATGCGCAGCCCCAAGGACACCCATTGGCACGTGACCATCTTCCGCA GCCTTTGCGCCTGGTGAGTTTGAGGTGGTTTTTGTCCTTTTCTTGGCGTT TTACTGGACGAAACTCGTGGTAAAAGTCAAGTCGTTTTTTTTTATTCATG CTGCATGTGGTCGTTATGGTGGGGATTTTTTGTTCGGTGTGGCAATGACG ACGTTTTCATTGCGTCTCCTAGTCGGGTGAGTGCCCCTGTTTTCTCTCAC CCGGCCAGCTCACCCTCGCAAGCCCCTCACGCAAGCCATGCCACGTCGAT TTCTATGTTACGCTGACCGAAAGGCGACAGCGTCAGTTGGACCAAAGTAT TGATGTTTCGAAGGTGTCTGAGTAGAGACCGGCGATTTTTTATTGTGAGG ACAACAACAACAACAACAACAACAACAACAACTATCACGACGACAACAAC AACCCAACATGCCATGTGCCATGCCGTGGGTACAGGCTGTCGAGCGAGGG GGAAACGGAGCGCGTGGCGGGCAGGCTGGTGGAGCCCCTGAACCTGGACA AGGTTATCTTCCTCTTCTGCACCGCGCAGCAGGTGGACTTCGAGGAGGTG GTCGACAAGATGCACCTCATGATGGTCAAGAGCCAGACGCTCGTCAAGGT GAGAAATGGCAAGAGATGAACAGGACAGACAGGCAGGACAGAGGACCCTT TTGTGAGTTTCAGCCAGGCGAGCGAGCAGCAGCCTACTTGCACGCAGCGG CTGTCGCCGGTGATGCCGTACGTGAAGGACGTACGTGAAGGAATTGATGA ATTGATGGAATAGTGAGTGCTCACGCTGTGTGGTGTCCTTTGCGTACCCG GGTTTCATCTGCATGCGGATGGGCAAGGCGTACACGTGGCTTGTGCACAC TCTACATGTTTTGTTGGTTCTGTGTCCCCCCCCCCTACCTCTTGTTTCTC GCATACCCCATACTTTCTCTTTTTGGGGAGGTCAATTCTCTTGGCTACCA TCAACCTCACTGAGAGATCTTACATTTTTTTTCTGGTTGTCCAATTTCTT CTTCTTGGGGGGTCCAAACCAACAAAAAAAGGCGCTCGGGTCGTCCGCGA CGTTCATCGTGGAGGTCATGGAGCGCCTCCACTACCCCAAGGCCGTCGTC GGCAAGACTCTGCTGGGCATGCTCCGCATGATCCACCACCAGCACCCGGA CCCGGCTGCCCTTGTGCGGGACTTCGACCTCTACCGCATCGTGCTTACCC TGTCGAGGAACGAGTCCCAGGTTCTCGTGGCCGAGCTCGCCGGACAACTC CTCCAAGACTTCGGCCGAGGAGGGCAGGGGGATGCTGTCGATACCGGTGG TGGTGGTGG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6929:974..3282+

>mRNA_E_fasciculatus_S2_contig6929.15065.1 ID=mRNA_E_fasciculatus_S2_contig6929.15065.1|Name=mRNA_E_fasciculatus_S2_contig6929.15065.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=822bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6929:974..3282+ (Ectocarpus fasciculatus EfasUO2)
GCCGCGGCCTCCTCCTCCCAAGCAAAACCACCACCACCAACGGCCGCGGC
AGTAGGCGTTCTGGGAGCAGCGGGGGGCGGCGGGGTTGACGAGGATCTTG
AGAACCAGGTCCTTCAGTGCATGTTCTACCTGTGCAGGATCAGCCGGAAG
CGACAGGAGAAGGCCGCCCGCGCGGGGCTCATTCCTCACCTTCGAAGGTG
CGTGCTGGAGCAGTCGCGGCTGAAGCAGTTCGCCCTCCAGATGGTGTGTG
ACTTCGCCCACACGTCGGGCGTGGTCCGGAGCTTGATGTGGGACGAGGGG
GTGCTGGACTTCTACCTGTCGGTCATGCGCAGCCCCAAGGACACCCATTG
GCACGTGACCATCTTCCGCAGCCTTTGCGCCTGGCTGTCGAGCGAGGGGG
AAACGGAGCGCGTGGCGGGCAGGCTGGTGGAGCCCCTGAACCTGGACAAG
GTTATCTTCCTCTTCTGCACCGCGCAGCAGGTGGACTTCGAGGAGGTGGT
CGACAAGATGCACCTCATGATGGTCAAGAGCCAGACGCTCGTCAAGGCGC
TCGGGTCGTCCGCGACGTTCATCGTGGAGGTCATGGAGCGCCTCCACTAC
CCCAAGGCCGTCGTCGGCAAGACTCTGCTGGGCATGCTCCGCATGATCCA
CCACCAGCACCCGGACCCGGCTGCCCTTGTGCGGGACTTCGACCTCTACC
GCATCGTGCTTACCCTGTCGAGGAACGAGTCCCAGGTTCTCGTGGCCGAG
CTCGCCGGACAACTCCTCCAAGACTTCGGCCGAGGAGGGCAGGGGGATGC
TGTCGATACCGGTGGTGGTGGT
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