prot_E_fasciculatus_S2_contig6914.15051.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6914.15051.1
Unique Nameprot_E_fasciculatus_S2_contig6914.15051.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length248
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig6914.15051.1 vs. uniprot
Match: A0A6H5KUE2_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUE2_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 2.060e-53
Identity = 130/188 (69.15%), Postives = 139/188 (73.94%), Query Frame = 0 
Query:   50 GLGIPRAPHPRSRSPSAFASLRAAQTGLCDAIRAAPKPAAGTSGXXXXXXXXASDDDSVDMFAREGWSSASLTSSGRDGVGESRGGTGGGIGGSVAPGVNRRALGPLGETTNSSXXXXXXIGYRGRGIPETKAERRQRVAKEKENSSATAGGGDRCADHDEMTSRNRSRKLNNDVCLGPGGKVDYLNT 237
            GLGIPR P    RSPSAFASLRAA TGLC A R+ P PA G            +D  SVD+FAREGWSS   TSSG+ GVGE      GG GGSVAPGVNRRALGPLGETTNSSXXXX  IG R RGI ET AERR+RVAKEKEN SA +GGGDR AD DE TSRNRS KL+N+VCLGP GKVDYL+T
Sbjct: 1028 GLGIPRVP----RSPSAFASLRAAGTGLCAANRSGPNPAGGGG------EKRPTDGVSVDLFAREGWSS---TSSGQAGVGE------GGGGGSVAPGVNRRALGPLGETTNSSXXXXG-IGDRRRGIRETVAERRERVAKEKENCSAASGGGDRWADQDETTSRNRSHKLHNNVCLGPDGKVDYLDT 1195
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BLAST of mRNA_E_fasciculatus_S2_contig6914.15051.1 vs. uniprot
Match: D7G2P5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P5_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 9.210e-46
Identity = 135/191 (70.68%), Postives = 140/191 (73.30%), Query Frame = 0 
Query:   50 GLGI-PRAPHPRSRSPSAFASLRAAQTGLCDAIRAAPKPAAGTSGXXXXXXXX-ASDDDSVDMFAREGWSS-ASLTSSGRDGVGESRGGTGGGIGGSVAPGVNRRALGPLGETTNSSXXXXXXIGYRGRGIPETKAERRQRVAKEKENSSATAGGGDRCADHDEMTSRNRSRKLNNDVCLGPGGKVDYLNT 237
            GLGI PRAP    RSPSAFASLRAA TGLC AIRAAPK A     XXXXXXXX ASDD SVD+FAREGWSS +SLTSSGRDGVGE      GG GGS APGVNRRALGPLGETTNSSXXXXX IG R RGI ET AERR                 DR AD DE TSRNRS KL+N+VCLGP GKVDYL+T
Sbjct:  929 GLGILPRAP----RSPSAFASLRAAGTGLCAAIRAAPKSAXXXXXXXXXXXXXRASDDVSVDLFAREGWSSTSSLTSSGRDGVGE------GGGGGSAAPGVNRRALGPLGETTNSSXXXXX-IGDRRRGIRETVAERRXXXXXXXXXXXXXXXXXDRWADQDETTSRNRSHKLHNNVCLGPDGKVDYLDT 1108
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6914.15051.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUE2_9PHAE2.060e-5369.15USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2P5_ECTSI9.210e-4670.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6914contigE_fasciculatus_S2_contig6914:4928..6101 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6914.15051.1mRNA_E_fasciculatus_S2_contig6914.15051.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6914 4928..7640 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6914.15051.1 ID=prot_E_fasciculatus_S2_contig6914.15051.1|Name=mRNA_E_fasciculatus_S2_contig6914.15051.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=248bp
RRPVLRRRVVRQAGVAGVGPAGAGPRAVLLGVHGQRPRRGPRQGGGLPWG
LGIPRAPHPRSRSPSAFASLRAAQTGLCDAIRAAPKPAAGTSGGGAGGQK
RASDDDSVDMFAREGWSSASLTSSGRDGVGESRGGTGGGIGGSVAPGVNR
RALGPLGETTNSSSSGGGGIGYRGRGIPETKAERRQRVAKEKENSSATAG
GGDRCADHDEMTSRNRSRKLNNDVCLGPGGKVDYLNTQQEQRREWSL*
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