mRNA_E_fasciculatus_S2_contig6905.15042.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig6905.15042.1
Unique NamemRNA_E_fasciculatus_S2_contig6905.15042.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig6905.15042.1 vs.
Match: N-alpha-acetyltransferase (40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W6_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 1.500e-61
Identity = 106/128 (82.81%), Postives = 111/128 (86.72%), Query Frame = 1 
Query:    1 MEAGWGWNKAEKWREMEHRDSRFLIARCGAEDDSGPEAAAAAGVAGLRIEEEGGAESNAVNGAGSENASAEAENARAGGEEKTKPGGAGERIAGYCDFRFAWDQDENEDGEGVGGMEDVLYVYELQVA 384
            M AGWGWNKAEKWREMEHRDSRFLIARCG EDDSGPEAAA  GVA LR+ EEG +ES+AVNGAG    S EA  AR+ G E+ KPGGAGERIAGYCDFRFAWDQDENEDGEGVGGMEDVLYVYELQVA
Sbjct:  105 MAAGWGWNKAEKWREMEHRDSRFLIARCGTEDDSGPEAAAV-GVARLRVAEEGVSESSAVNGAGGATDSEEAARARSRGGEERKPGGAGERIAGYCDFRFAWDQDENEDGEGVGGMEDVLYVYELQVA 231
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6905.15042.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
N-alpha-acetyltransferase1.500e-6182.8140 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W6_ECTS... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6905contigE_fasciculatus_S2_contig6905:1039..1422 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score204.1
Seed ortholog evalue3.8e-50
Seed eggNOG ortholog2880.D7G8W6
Preferred nameNAT4
Model size385
KEGG koko:K20405,ko:K20794
KEGG Pathwayko04150,map04150
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004402,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006325,GO:0006355,GO:0006464,GO:0006473,GO:0006474,GO:0006475,GO:0006807,GO:0006996,GO:0008080,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010485,GO:0010556,GO:0016043,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0017196,GO:0018193,GO:0018205,GO:0018206,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0031365,GO:0031935,GO:0033043,GO:0033044,GO:0034212,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043543,GO:0043967,GO:0043968,GO:0043998,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0051276,GO:0051604,GO:0060255,GO:0060968,GO:0061187,GO:0061733,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:1901564,GO:1902275,GO:1903506,GO:1990189,GO:2000112,GO:2001141
Exons1
EggNOG free text desc.H2A histone acetyltransferase activity
EggNOG OGsKOG2488@1,KOG2488@2759
Ec32 ortholog descriptionAcetyltransferase (GNAT) domain protein
Ec32 orthologEc-15_004510.1
EC2.3.1.257
Cds size384
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842348.1799526-CDS-E_fasciculatus_S2_contig6905:1038..14221696842348.1799526-CDS-E_fasciculatus_S2_contig6905:1038..1422Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6905 1039..1422 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6905.15042.1prot_E_fasciculatus_S2_contig6905.15042.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig6905 1039..1422 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig6905.15042.1

>prot_E_fasciculatus_S2_contig6905.15042.1 ID=prot_E_fasciculatus_S2_contig6905.15042.1|Name=mRNA_E_fasciculatus_S2_contig6905.15042.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=128bp
MEAGWGWNKAEKWREMEHRDSRFLIARCGAEDDSGPEAAAAAGVAGLRIE
EEGGAESNAVNGAGSENASAEAENARAGGEEKTKPGGAGERIAGYCDFRF
AWDQDENEDGEGVGGMEDVLYVYELQVA
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mRNA from alignment at E_fasciculatus_S2_contig6905:1039..1422+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig6905.15042.1 ID=mRNA_E_fasciculatus_S2_contig6905.15042.1|Name=mRNA_E_fasciculatus_S2_contig6905.15042.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=384bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6905:1039..1422+ (Ectocarpus fasciculatus EfasUO2)
ATGGAGGCCGGTTGGGGCTGGAACAAGGCAGAGAAGTGGCGAGAGATGGA
GCATCGCGACTCCCGATTTTTGATCGCTCGTTGTGGGGCTGAAGACGACA
GTGGCCCCGAGGCGGCGGCGGCGGCGGGGGTGGCGGGATTGAGAATAGAA
GAAGAGGGAGGTGCCGAGAGCAACGCGGTGAATGGTGCCGGGAGCGAAAA
CGCCAGTGCGGAGGCAGAAAACGCGCGCGCAGGCGGAGAAGAGAAGACAA
AGCCGGGGGGCGCAGGAGAACGAATCGCCGGCTACTGCGACTTTCGGTTC
GCGTGGGACCAGGACGAAAATGAGGACGGGGAGGGAGTCGGAGGAATGGA
GGACGTGTTGTACGTTTACGAGTTGCAGGTGGCG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6905:1039..1422+

>mRNA_E_fasciculatus_S2_contig6905.15042.1 ID=mRNA_E_fasciculatus_S2_contig6905.15042.1|Name=mRNA_E_fasciculatus_S2_contig6905.15042.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=384bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6905:1039..1422+ (Ectocarpus fasciculatus EfasUO2)
ATGGAGGCCGGTTGGGGCTGGAACAAGGCAGAGAAGTGGCGAGAGATGGA
GCATCGCGACTCCCGATTTTTGATCGCTCGTTGTGGGGCTGAAGACGACA
GTGGCCCCGAGGCGGCGGCGGCGGCGGGGGTGGCGGGATTGAGAATAGAA
GAAGAGGGAGGTGCCGAGAGCAACGCGGTGAATGGTGCCGGGAGCGAAAA
CGCCAGTGCGGAGGCAGAAAACGCGCGCGCAGGCGGAGAAGAGAAGACAA
AGCCGGGGGGCGCAGGAGAACGAATCGCCGGCTACTGCGACTTTCGGTTC
GCGTGGGACCAGGACGAAAATGAGGACGGGGAGGGAGTCGGAGGAATGGA
GGACGTGTTGTACGTTTACGAGTTGCAGGTGGCG
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