mRNA_E_fasciculatus_S2_contig6904.15041.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6904.15041.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUB8_ECTSI) HSP 1 Score: 413 bits (1062), Expect = 3.000e-145 Identity = 220/231 (95.24%), Postives = 223/231 (96.54%), Query Frame = 1
Query: 1 MARSATYVLAATAIASSTTAFVPMGGGLPSSAPQATAERRSGTTCRRGRRTDAAAAVAPLSMAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDAKAVLNERILRLRENEKRKKEEAELETPWDDIGSAFTEVHNMPVGSDDDDVDLDSMVV 693
MARSA YVLAATAI SSTTAFVPMGG SSAPQATAERRS TCRRGR+TDAAAAVAPLSMAIRAVES+NADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMP DIEEK+FLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDAKAVLNERILRLRENEKRKKEEAELETPWDDIGSAFTEVHNMPVGSDDDDVDLDSMVV
Sbjct: 1 MARSAAYVLAATAIVSSTTAFVPMGGARLSSAPQATAERRS-ATCRRGRQTDAAAAVAPLSMAIRAVESFNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPKDIEEKFFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDAKAVLNERILRLRENEKRKKEEAELETPWDDIGSAFTEVHNMPVGSDDDDVDLDSMVV 230
BLAST of mRNA_E_fasciculatus_S2_contig6904.15041.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAF1_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.080e-37 Identity = 86/184 (46.74%), Postives = 106/184 (57.61%), Query Frame = 1
Query: 178 LSMAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYV-GEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDAKAVLNERILRLRENEKRKKEEAELETP-----------WDDIGSAFTEVHNMPVGSDDDDVDLDSMVV 693
LSM I+AV Y++ F L E+ A L YL+H DM EVCKQFD SAEYV GEIFQPVPYS TP GMP E +Y ++ Y IAN+PPVVMF AKIFKPSRLCAV++V G S A A L E + N + + E W+ +G G DDD +LD++V+
Sbjct: 48 LSMGIKAVRDYDSSFTLSEECTALLTAYLQHPDMAKEVCKQFDLTSAEYVDGEIFQPVPYSPNTPHGMPLAFE-RYLNHDDYVIANVPPVVMFKAKIFKPSRLCAVFRVAGRSAAAVAALREAREHAQNNAVPRGAADQSEGSAGAGQSDSGEVWEGLGDVIRASFEEGDGDYDDDDELDALVL 230
BLAST of mRNA_E_fasciculatus_S2_contig6904.15041.1 vs.
Match: Hypothetical (protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4Q2X6_HEMAN) HSP 1 Score: 129 bits (323), Expect = 3.770e-33 Identity = 90/214 (42.06%), Postives = 114/214 (53.27%), Query Frame = 1
Query: 70 MGGGLPSSAPQATAERRSGTTCRRGRR--TDAAAAVAPLSMAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDAKAVLNERILRLRENEKRK---KEEAELETPWDDIGSAFTEVHNM-PVGSDDDDVDLDSMVV 693
+GG P A A G R GR+ T+ + L M I+AVE + F+L ++ A L +L M V KQ +AE+ G++FQPVPYS TP GMPAD E+ YFLN Y I N+PP +MF AK FKPSRLCAVY + G+ V E IL +E R+ +PW +G A + M PV DDD DLDSMVV
Sbjct: 31 LGGRAPMLAAPYQAHPAQGLRIRAGRQGVTEGQGGMWALRMGIKAVEHFEGGFQLSDEVQAALTEHLTSDKMDLTVEKQAHAAAAEFTGKLFQPVPYSVQTPHGMPADFEQ-YFLNPDYAIINVPPQIMFEAKCFKPSRLCAVYALKGVDP----VHREAILSQKEAVSRRGVAPAPPRGGSPWAGMGGAMADASRMDPV---DDDADLDSMVV 236
BLAST of mRNA_E_fasciculatus_S2_contig6904.15041.1 vs.
Match: Uncharacterized (protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TX51_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.300e-31 Identity = 74/190 (38.95%), Postives = 106/190 (55.79%), Query Frame = 1
Query: 190 IRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSEDA-KAVLNERILRL--------RENEKRKKEEAELETP------------WDDIGSAFTEVH-NMPVGSDDDDVDLDSMVV 693
+R VE+++ F L ++ L GY+ +DM EVCKQ C SA + G++FQPVPYS TP GMP + E+ + LN Y I N+PP VMF AKIFKP RLCAV+ ++GL D K +L + R+ + + K + +E + P W+ +G A EV G ++D+ LD+MVV
Sbjct: 48 LRGVETFDGAFTLSPESEGVLVGYMECEDMKKEVCKQAKCTSARFTGQLFQPVPYSPGTPLGMPREFED-FHLNPSYAICNVPPTVMFKAKIFKPPRLCAVFTIEGLDPDEEKKILEKARARMDLQAQAAAHQPMEEKDDGSEEKRPVTVLKGSPKEENWNGVGKALHEVALGEKAGEEEDEAALDAMVV 236
BLAST of mRNA_E_fasciculatus_S2_contig6904.15041.1 vs.
Match: Uncharacterized (protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J7F1K5_9CYAN) HSP 1 Score: 114 bits (284), Expect = 7.170e-29 Identity = 54/105 (51.43%), Postives = 76/105 (72.38%), Query Frame = 1
Query: 184 MAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYK 498
MA++ ++S++++F LE + ATL L ++ + +VC+Q CE E+ +FQPVPYS ATP+GMPA+ E KY +E+Y I N+PP MF AKIFKPSRLCA+YK
Sbjct: 1 MALKIIQSFDSNFTLEPQAKATLFELLTNESFLKQVCQQSKCEQVEFTELLFQPVPYSSATPKGMPAEFE-KYHESEEYIILNVPPNFMFQAKIFKPSRLCAIYK 104
BLAST of mRNA_E_fasciculatus_S2_contig6904.15041.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VGI5_9CRYP) HSP 1 Score: 112 bits (279), Expect = 1.020e-27 Identity = 60/126 (47.62%), Postives = 82/126 (65.08%), Query Frame = 1
Query: 169 VAPLSMAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLS-EDAKAVLNER 543
+A L M I+AVE++ F+L ++ L G+L M V KQ AE+ G++FQPVPYS TP GMPAD EE YFL+ Y I N+PP +MF AK FKPSRLCAV+ + G++ E + VL+++
Sbjct: 1 LAGLRMGIKAVENFEGGFQLSDEVREALTGHLTSDKMELMVEKQAHAADAEFTGKLFQPVPYSVNTPHGMPADCEE-YFLHPDYLIINVPPQIMFEAKCFKPSRLCAVFALKGVAPEQRETVLSQK 125
BLAST of mRNA_E_fasciculatus_S2_contig6904.15041.1 vs.
Match: Uncharacterized (protein n=1 Tax=Kamptonema sp. SIO1D9 TaxID=2607808 RepID=A0A6P1AAG1_9CYAN) HSP 1 Score: 110 bits (274), Expect = 2.190e-27 Identity = 50/105 (47.62%), Postives = 74/105 (70.48%), Query Frame = 1
Query: 184 MAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYK 498
MA++ VE+++ F L +T TL +L+++ I ++C+Q E E+ +FQPVPYS +TP+GMPA++E Y+ NE Y I N+PP +MF KIFKPSRLCA+Y+
Sbjct: 1 MALKIVENFDGSFTLPSETQETLFTFLKNEKFIQQICQQVKAEKLEFTELLFQPVPYSISTPKGMPAELES-YYNNEDYAIVNVPPNLMFQCKIFKPSRLCAIYR 104
BLAST of mRNA_E_fasciculatus_S2_contig6904.15041.1 vs.
Match: hypothetical (protein n=1 Tax=Kovacikia minuta TaxID=2931930 RepID=UPI001CCA52C6) HSP 1 Score: 107 bits (268), Expect = 1.840e-26 Identity = 48/105 (45.71%), Postives = 73/105 (69.52%), Query Frame = 1
Query: 184 MAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYK 498
M +R ++ ++ DF L+ + ATL LR++ + +V +Q C E+ ++FQPVPYS ATP+GMPA+ E+ Y+ ++ + I N+PP MF AKIFKPSRLCA+Y+
Sbjct: 1 MPLRIIDDFDGDFTLDPEAEATLFELLRNEAFLQQVAQQLQCPKVEFTEQLFQPVPYSAATPKGMPAEFEQ-YYASKDHAIINVPPNFMFKAKIFKPSRLCAIYR 104
BLAST of mRNA_E_fasciculatus_S2_contig6904.15041.1 vs.
Match: Uncharacterized (protein n=10 Tax=Hapalosiphonaceae TaxID=1892263 RepID=A0A0S3TRB2_9CYAN) HSP 1 Score: 107 bits (267), Expect = 2.670e-26 Identity = 51/111 (45.95%), Postives = 75/111 (67.57%), Query Frame = 1
Query: 184 MAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDGLSE 516
MA++ +E++++ F LE + L L + + ++C+ +CE E+ +FQPVPYS ATP+GMPA+ E KY +E+Y I N+PP +F AKIFKPSRLCAVYK G+ +
Sbjct: 1 MALKIIENFDSSFTLEPQAKENLFKLLTSEAFLNQICQNLECEQVEFTELLFQPVPYSIATPKGMPAEFE-KYHESEEYVIINVPPNFIFTAKIFKPSRLCAVYKKLGIGD 110
BLAST of mRNA_E_fasciculatus_S2_contig6904.15041.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hassallia byssoidea VB512170 TaxID=1304833 RepID=A0A846H4X5_9CYAN) HSP 1 Score: 105 bits (263), Expect = 1.030e-25 Identity = 49/108 (45.37%), Postives = 71/108 (65.74%), Query Frame = 1
Query: 184 MAIRAVESYNADFELEEKTAATLDGYLRHKDMIAEVCKQFDCESAEYVGEIFQPVPYSQATPQGMPADIEEKYFLNEQYGIANIPPVVMFNAKIFKPSRLCAVYKVDG 507
M + ++++++ F LE + +L L + + +VC+Q +CE E+ +FQPVPYS TP+GMP + E KY N +Y I N+PP MFNAKIFKPSRLCA+Y+ G
Sbjct: 1 MPFKIIQNFDSSFTLEPELQKSLFSLLTSEAFLKQVCQQLNCEKVEFTELLFQPVPYSLTTPKGMPGEFE-KYHDNSEYAIINVPPNFMFNAKIFKPSRLCAIYRKIG 107 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6904.15041.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig6904.15041.1 >prot_E_fasciculatus_S2_contig6904.15041.1 ID=prot_E_fasciculatus_S2_contig6904.15041.1|Name=mRNA_E_fasciculatus_S2_contig6904.15041.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=232bp MARSATYVLAATAIASSTTAFVPMGGGLPSSAPQATAERRSGTTCRRGRRback to top mRNA from alignment at E_fasciculatus_S2_contig6904:2423..6457+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig6904.15041.1 ID=mRNA_E_fasciculatus_S2_contig6904.15041.1|Name=mRNA_E_fasciculatus_S2_contig6904.15041.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4035bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6904:2423..6457+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6904:2423..6457+ >mRNA_E_fasciculatus_S2_contig6904.15041.1 ID=mRNA_E_fasciculatus_S2_contig6904.15041.1|Name=mRNA_E_fasciculatus_S2_contig6904.15041.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=696bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6904:2423..6457+ (Ectocarpus fasciculatus EfasUO2)back to top |