prot_E_fasciculatus_S2_contig69.15023.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig69.15023.1
Unique Name	prot_E_fasciculatus_S2_contig69.15023.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	1040

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig69.15023.1 vs. uniprot
Match: A0A6H5L3B9_9PHAE (GRIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L3B9_9PHAE)

HSP 1 Score: 1406 bits (3640), Expect = 0.000e+0
Identity = 857/1047 (81.85%), Postives = 887/1047 (84.72%), Query Frame = 0

Query:    1 MFSGFDNFAEGFKRFSLDALQDQDDENATEKDEQKRLPAVPEQQHPTEHTESPTENPPXXXXXXXXXXXXXXXXNAGATDAQRKGVSGSQQRHGGAHFQNSPQAMSIAHAGISPAAVASPSELDQQSTFDGQPGGVLVEAEEPSRGNTGTQAAEEHMEERREGQMVCGEKHSGPSSTLARDSSAPLSFVEEGFSDKTDTPAALGRSETYSRTIEDGTEDVHVGDARTLDPSSSGKLQNALEGSKP-------LATDEGEATNTTNDSSASGPTGTDGGGERRVDHQENGESIEAGSSPQQSAEAATAGAAGTALVVEPAKDTTTADPLTVVAMRQELSLVKNAASGLEGALRESRSEVQLLRELLATEQDTTRKLSDEVNATRMGFQESNAAHQRTAEQSHALEEELYNTRKVVESLRAESAAFKAKVDEGVEDRHALEGKLRHLQAGLTEGQEAARQEGRQEAERLEARIRDLLKDRDRKQAELELQNARRKETXXMARDLESQLAAVERIAQEREVELSKQRDDMVALKKNTGEATDQKKTWATKYEALERNFKQVRAQSKRIESELXXXXXXXXXXXXXKAVLEERVEVEGAERVTVVASVSQERDFLLRQASISAQNSGVDRLEQEVVELRLSQEAQATAAAARAQTTGVLEEYRTRAQQALKRANEITSQTASENKRLEAEMSKLADEVAQQRPLWEKSKQQEEVHRAEVAELKEKIATQVTELDNMATAAAALEAQVSEKEEERRDAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENRQRRKHSPEKDDVNADMGKNLSSPTPAVSSLSMGWDEEKHGSRSGTPRRGMGTEAAGAAWPERRSLGESVSSMPSEADSADVAQGSVGEQLFYVHQLRERMSKEQIEMRSLISELEASRAAADAQAAKQAQLEKQLEAALLDKKRLQDLDSGRNAAINLEYLKNCVVGALRTSEPSEHARLLPVITTILKLSEDEAAVIAKNISTRAQHQGSFGGSLPPGGXXXXXXXXXXXXXX-SSNPQNK 1039
            MFSGFDNFAEGFKRFSLDALQDQD+   T KDEQ+RLPA+PEQQHP EHTESPT+ PP                +AGAT+AQR GV G +Q+HG AH +NSP A S+A AGISPAAVASPSELDQ STFD Q GGV+VEAEE  R N GTQAA+E MEERREGQM  GE +SGPS TLARDSSAP S VEEGFSD TDTPAALGRSE    TI+DGTED+H+G+A T DPSSSGKLQ+ LEGSKP       LA DEG ATNTTNDSSA GPT T+ GGERRVDHQEN E I+ GSSPQ+S EAATAGAAGTA VV+PA+DTTTADPLTVVAMRQELSLVKNAASGLEGALRESRSEVQLLRELLATEQDTTRKLSDEVNATRMGFQESNAAHQRTAEQSHALEEELYN R +VESLRAESAA KAKVDEGVEDRHALEGKLRHLQAG+TEGQEAARQEGRQE ERLEARIRDLLKDRDRKQAEL+LQNARRKET  MARDLESQLAAVERIAQEREVELSKQRDDMVALKKNTGEATDQKKTWATKYEALERNFKQVRAQS RIESEL             KAVLEERVEVEGAERVTVVASVSQERDFLLRQA        VDRLEQEVVELR SQEAQATAAAARAQTTGVLEEYRTRAQQALKRANEITSQTASENKRL+AEM KL+DEVAQQRPLWE+SKQ EEVHRAEVAELKEKIA Q TEL NMA AAAALEAQV EKEEERRDAH                                                ENRQRRKHSPEK DVNADMGKNLSSPTPAVSSLSMGWDEEKHGSR+GTPRRGMGTEA GAAWPERRSLGESVSSMPSEADSADVAQGSVGEQLFYVHQLRERMSKEQIEMRSLISELEASRAAADAQAAKQAQLEKQLEAALLDKKRLQDLDSGRNAAINLEYLKNCVVGALRTSEPSEHARLLPVITTILKLSEDEAAVIAKNISTRAQHQGSFGGSLPPGG   XXXXXXXXXXX SSNPQ K
Sbjct:    1 MFSGFDNFAEGFKRFSLDALQDQDEN--TSKDEQQRLPALPEQQHPMEHTESPTKEPPPQLAEVEDNEWDWDHGHAGATNAQRDGVGGLRQKHG-AHVRNSPHATSVAPAGISPAAVASPSELDQ-STFDEQAGGVVVEAEEALRENAGTQAAKEGMEERREGQMFGGETNSGPS-TLARDSSAPSSSVEEGFSDNTDTPAALGRSEPCIGTIQDGTEDIHLGNAPTPDPSSSGKLQDFLEGSKPAAAKAIGLAIDEGVATNTTNDSSAEGPTDTNWGGERRVDHQENAERIQDGSSPQKSPEAATAGAAGTA-VVKPAEDTTTADPLTVVAMRQELSLVKNAASGLEGALRESRSEVQLLRELLATEQDTTRKLSDEVNATRMGFQESNAAHQRTAEQSHALEEELYNARTLVESLRAESAALKAKVDEGVEDRHALEGKLRHLQAGVTEGQEAARQEGRQEVERLEARIRDLLKDRDRKQAELDLQNARRKETREMARDLESQLAAVERIAQEREVELSKQRDDMVALKKNTGEATDQKKTWATKYEALERNFKQVRAQSIRIESELEEAREHATRIEAEKAVLEERVEVEGAERVTVVASVSQERDFLLRQAI------AVDRLEQEVVELRRSQEAQATAAAARAQTTGVLEEYRTRAQQALKRANEITSQTASENKRLKAEMRKLSDEVAQQRPLWEQSKQLEEVHRAEVAELKEKIANQATELGNMAAAAAALEAQVLEKEEERRDAHTSVMRLEAQGKSLKQELQRQQKALAAAQENEVTLQTRLADQEAALQAAENRQRRKHSPEKVDVNADMGKNLSSPTPAVSSLSMGWDEEKHGSRNGTPRRGMGTEATGAAWPERRSLGESVSSMPSEADSADVAQGSVGEQLFYVHQLRERMSKEQIEMRSLISELEASRAAADAQAAKQAQLEKQLEAALLDKKRLQDLDSGRNAAINLEYLKNCVVGALRTSEPSEHARLLPVITTILKLSEDEAAVIAKNISTRAQHQGSFGGSLPPGGDARXXXXXXXXXXXXSSNPQQK 1035

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig69.15023.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig69.15023.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5L3B9_9PHAE	0.000e+0	81.85	GRIP domain-containing protein n=2 Tax=Ectocarpus ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 891..911
None	No IPR available	COILS	Coil	Coil	coord: 534..589
None	No IPR available	COILS	Coil	Coil	coord: 443..512
None	No IPR available	COILS	Coil	Coil	coord: 926..946
None	No IPR available	COILS	Coil	Coil	coord: 722..798
None	No IPR available	COILS	Coil	Coil	coord: 648..686
None	No IPR available	PANTHER	PTHR34491	FAMILY NOT NAMED	coord: 132..936
IPR000237	GRIP domain	SMART	SM00755	1grip	coord: 952..999 e-value: 7.1E-8 score: 42.2
IPR000237	GRIP domain	PFAM	PF01465	GRIP	coord: 954..994 e-value: 3.7E-12 score: 45.9
IPR000237	GRIP domain	PROSITE	PS50913	GRIP	coord: 949..999 score: 11.061

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig69	contig	E_fasciculatus_S2_contig69:2203..9078 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig69.15023.1	mRNA_E_fasciculatus_S2_contig69.15023.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig69 1276..9078 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig69.15023.1 ID=prot_E_fasciculatus_S2_contig69.15023.1|Name=mRNA_E_fasciculatus_S2_contig69.15023.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=1040bp
MFSGFDNFAEGFKRFSLDALQDQDDENATEKDEQKRLPAVPEQQHPTEHT
ESPTENPPPPPAEVEDNEWDWDQDNAGATDAQRKGVSGSQQRHGGAHFQN
SPQAMSIAHAGISPAAVASPSELDQQSTFDGQPGGVLVEAEEPSRGNTGT
QAAEEHMEERREGQMVCGEKHSGPSSTLARDSSAPLSFVEEGFSDKTDTP
AALGRSETYSRTIEDGTEDVHVGDARTLDPSSSGKLQNALEGSKPLATDE
GEATNTTNDSSASGPTGTDGGGERRVDHQENGESIEAGSSPQQSAEAATA
GAAGTALVVEPAKDTTTADPLTVVAMRQELSLVKNAASGLEGALRESRSE
VQLLRELLATEQDTTRKLSDEVNATRMGFQESNAAHQRTAEQSHALEEEL
YNTRKVVESLRAESAAFKAKVDEGVEDRHALEGKLRHLQAGLTEGQEAAR
QEGRQEAERLEARIRDLLKDRDRKQAELELQNARRKETREMARDLESQLA
AVERIAQEREVELSKQRDDMVALKKNTGEATDQKKTWATKYEALERNFKQ
VRAQSKRIESELEEARENAARIEAEKAVLEERVEVEGAERVTVVASVSQE
RDFLLRQASISAQNSGVDRLEQEVVELRLSQEAQATAAAARAQTTGVLEE
YRTRAQQALKRANEITSQTASENKRLEAEMSKLADEVAQQRPLWEKSKQQ
EEVHRAEVAELKEKIATQVTELDNMATAAAALEAQVSEKEEERRDAHTSV
MRLEAQGKSLKQELQRQQKALAAAQENGATLQTRLADQEAALQAAENRQR
RKHSPEKDDVNADMGKNLSSPTPAVSSLSMGWDEEKHGSRSGTPRRGMGT
EAAGAAWPERRSLGESVSSMPSEADSADVAQGSVGEQLFYVHQLRERMSK
EQIEMRSLISELEASRAAADAQAAKQAQLEKQLEAALLDKKRLQDLDSGR
NAAINLEYLKNCVVGALRTSEPSEHARLLPVITTILKLSEDEAAVIAKNI
STRAQHQGSFGGSLPPGGDSRTSSSSSSRSWWSSNPQNK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000237	GRIP_dom