prot_E_fasciculatus_S2_contig6865.14998.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig6865.14998.1
Unique Name	prot_E_fasciculatus_S2_contig6865.14998.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	97

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig6865.14998.1 vs. uniprot
Match: A0A6H5J5U8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5U8_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 1.390e-46
Identity = 84/97 (86.60%), Postives = 88/97 (90.72%), Query Frame = 0

Query:    1 MWSLNKGDWPWLVLGVIGAIIAGGTTPSEGVFIAHVQSNLYREDVDEMRTIGNRWALGFVGLGLVALIGNFILSTGFAVAGERMTRSLRKMAFEAMV 97
            MWSLNKGDWPWLVLGVIGAIIAGGT PSEGVFIAHVQ  +Y     EMRTIGNRWALGFVGLGL AL+GNF+LSTGFAVAGERMTR+LRKMAFEAMV
Sbjct:  603 MWSLNKGDWPWLVLGVIGAIIAGGTAPSEGVFIAHVQVWVY-----EMRTIGNRWALGFVGLGLTALVGNFVLSTGFAVAGERMTRTLRKMAFEAMV 694

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BLAST of mRNA_E_fasciculatus_S2_contig6865.14998.1 vs. uniprot
Match: D7FHL1_ECTSI (ATP-binding cassette, sub-family B (MDR/TAP), member 1A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL1_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 2.270e-41
Identity = 69/97 (71.13%), Postives = 83/97 (85.57%), Query Frame = 0

Query:    1 MWSLNKGDWPWLVLGVIGAIIAGGTTPSEGVFIAHVQSNLYREDVDEMRTIGNRWALGFVGLGLVALIGNFILSTGFAVAGERMTRSLRKMAFEAMV 97
            MW+LNKGDWPWL++G +GA++AGG  PSEGVF+A  QSNLY ED ++MR IGNRWALGFVGLG + L+GN  LSTGF V+GER+TR+LR MAFEAMV
Sbjct:  704 MWALNKGDWPWLLMGFVGAVVAGGCAPSEGVFLAQGQSNLYLEDTEQMRKIGNRWALGFVGLGFLNLVGNMALSTGFTVSGERLTRTLRYMAFEAMV 800

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BLAST of mRNA_E_fasciculatus_S2_contig6865.14998.1 vs. uniprot
Match: D8LS12_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS12_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 1.150e-26
Identity = 50/97 (51.55%), Postives = 77/97 (79.38%), Query Frame = 0

Query:    1 MWSLNKGDWPWLVLGVIGAIIAGGTTPSEGVFIAHVQSNLYREDVDEMRTIGNRWALGFVGLGLVALIGNFILSTGFAVAGERMTRSLRKMAFEAMV 97
            MW+LNK +  +L+LG+IGA++AG   P EGV IA++Q+NLY  D D++R++G +W+LGFVGL  VA++G+  ++ GF+VAGER+TR LR++ F A++
Sbjct:  722 MWALNKPEAGYLILGLIGALMAGSLFPIEGVLIANMQNNLYATDPDKVRSVGEKWSLGFVGLAAVAIVGHCAMAYGFSVAGERLTRRLREIGFRAIL 818

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BLAST of mRNA_E_fasciculatus_S2_contig6865.14998.1 vs. uniprot
Match: A0A836CGZ9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ9_9STRA)

HSP 1 Score: 107 bits (266), Expect = 6.560e-25
Identity = 45/97 (46.39%), Postives = 69/97 (71.13%), Query Frame = 0

Query:    1 MWSLNKGDWPWLVLGVIGAIIAGGTTPSEGVFIAHVQSNLYREDVDEMRTIGNRWALGFVGLGLVALIGNFILSTGFAVAGERMTRSLRKMAFEAMV 97
            +W+LN+ DW W+V+G++GA I G   P+EG+ IA++Q+  Y  + D+MR  G+ W LGFV L + A +G+ +L+ GF+ +GERM R LR+ AF A+V
Sbjct:  633 LWALNRPDWMWVVVGLVGAFITGSLFPTEGIIIANIQNTFYLTNADDMRRTGHLWTLGFVFLAIAATVGHLMLAAGFSTSGERMVRRLRETAFAAIV 729

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BLAST of mRNA_E_fasciculatus_S2_contig6865.14998.1 vs. uniprot
Match: A0A835Z4J1_9STRA (ATP-binding cassette, sub-family B, member 1A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J1_9STRA)

HSP 1 Score: 100 bits (250), Expect = 9.530e-23
Identity = 44/97 (45.36%), Postives = 64/97 (65.98%), Query Frame = 0

Query:    1 MWSLNKGDWPWLVLGVIGAIIAGGTTPSEGVFIAHVQSNLYREDVDEMRTIGNRWALGFVGLGLVALIGNFILSTGFAVAGERMTRSLRKMAFEAMV 97
            +W++ + DWPW+ +G+ GA + G   P EG+ +A +Q   Y    +E+   G  W LGFVGL    L+GN +L+TGFA +GERMTR LR MAF+A++
Sbjct:  777 LWAMQRPDWPWVAMGIGGATLCGAMFPVEGIILAKLQEAFYLRTSEEILDQGTSWVLGFVGLAGSTLLGNLMLTTGFATSGERMTRRLRGMAFKAII 873

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BLAST of mRNA_E_fasciculatus_S2_contig6865.14998.1 vs. uniprot
Match: A0A6H5L6B5_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B5_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 2.730e-18
Identity = 39/77 (50.65%), Postives = 60/77 (77.92%), Query Frame = 0

Query:   21 IAGGTTPSEGVFIAHVQSNLYREDVDEMRTIGNRWALGFVGLGLVALIGNFILSTGFAVAGERMTRSLRKMAFEAMV 97
            +AG   P EGV IA++Q+NLY  D D++R++G +W+LGFVGL  VA++G+  ++ GF+VAGER+TR LR++ F A++
Sbjct:  427 MAGSLFPIEGVLIANMQNNLYASDPDKVRSVGEKWSLGFVGLAAVAIVGHCTMAYGFSVAGERLTRRLREIGFRAIL 503

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BLAST of mRNA_E_fasciculatus_S2_contig6865.14998.1 vs. uniprot
Match: D7FHL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL4_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 2.130e-16
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0

Query:    1 MWSLNKGDWPWLVLGVIGAIIAGGTTPSEGVFIAHVQ 37
            MWSLNKGDWPWLVLGVIGAIIAGGTTPSEGVFIAHVQ
Sbjct:  675 MWSLNKGDWPWLVLGVIGAIIAGGTTPSEGVFIAHVQ 711

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BLAST of mRNA_E_fasciculatus_S2_contig6865.14998.1 vs. uniprot
Match: A0A6A4W450_AMPAM (Multidrug resistance protein 1 n=7 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4W450_AMPAM)

HSP 1 Score: 78.2 bits (191), Expect = 8.890e-15
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 0

Query:    4 LNKGDWPWLVLGVIGAIIAGGTTPSEGVFIAHVQSNLYREDVDEMRTIGNRWALGFVGLGLVALIGNFILSTGFAVAGERMTRSLRKMAFEAMV 97
            LN  +WP+L+LGV+GA I GG+TP+       V  NL  ED DE       + L F+G+G++  + +F     F VAGER+T  +RK+ F+A++
Sbjct:  502 LNGSEWPYLLLGVVGAAIMGGSTPAHAAVFGGVLGNLAVEDPDEALDNAQFYGLLFLGIGVITFLASFAQVFMFGVAGERLTTRIRKLTFKALL 595

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BLAST of mRNA_E_fasciculatus_S2_contig6865.14998.1 vs. uniprot
Match: A0A401NNP4_SCYTO (Uncharacterized protein n=6 Tax=Galeoidea TaxID=119195 RepID=A0A401NNP4_SCYTO)

HSP 1 Score: 74.7 bits (182), Expect = 1.460e-13
Identity = 37/97 (38.14%), Postives = 60/97 (61.86%), Query Frame = 0

Query:    1 MWSLNKGDWPWLVLGVIGAIIAGGTTPSEGVFIAHVQSNLYREDVDEMRTIGNRWALGFVGLGLVALIGNFILSTGFAVAGERMTRSLRKMAFEAMV 97
            ++ LNK +WP++ LGVIGAI+ G T P+  +  A + S   + D D +R   N +++ F  +G+V+ +  F+    F  AGE +T+ LR MAF+AM+
Sbjct:  450 LFKLNKSEWPYIFLGVIGAIVNGATHPAFCIIFAKIVSIFTQTDTDVIRQQANLYSILFCVIGIVSFVTYFLQGFMFGKAGETLTQKLRYMAFKAML 546

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BLAST of mRNA_E_fasciculatus_S2_contig6865.14998.1 vs. uniprot
Match: R7UU17_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UU17_CAPTE)

HSP 1 Score: 73.6 bits (179), Expect = 3.680e-13
Identity = 35/94 (37.23%), Postives = 57/94 (60.64%), Query Frame = 0

Query:    4 LNKGDWPWLVLGVIGAIIAGGTTPSEGVFIAHVQSNLYREDVDEMRTIGNRWALGFVGLGLVALIGNFILSTGFAVAGERMTRSLRKMAFEAMV 97
            LN  +W ++++G IGA IAG   P+  V +  + S     DVD MR  G R A  ++ +G +  +  F++  GF+ +GE++T  LRK+AF+AM+
Sbjct:  227 LNTPEWMFILVGCIGATIAGAEQPTSAVLLTEILSTFDGLDVDSMRANGKRLAYMYLVIGSITAVATFLMLFGFSRSGEKLTMRLRKLAFDAML 320

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig6865.14998.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig6865.14998.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5J5U8_9PHAE	1.390e-46	86.60	ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
D7FHL1_ECTSI	2.270e-41	71.13	ATP-binding cassette, sub-family B (MDR/TAP), memb...	[more]
D8LS12_ECTSI	1.150e-26	51.55	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A836CGZ9_9STRA	6.560e-25	46.39	ATP-binding cassette, sub-family B, member 1A n=1 ...	[more]
A0A835Z4J1_9STRA	9.530e-23	45.36	ATP-binding cassette, sub-family B, member 1A n=2 ...	[more]
A0A6H5L6B5_9PHAE	2.730e-18	50.65	ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
D7FHL4_ECTSI	2.130e-16	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6A4W450_AMPAM	8.890e-15	40.43	Multidrug resistance protein 1 n=7 Tax=Amphibalanu...	[more]
A0A401NNP4_SCYTO	1.460e-13	38.14	Uncharacterized protein n=6 Tax=Galeoidea TaxID=11...	[more]
R7UU17_CAPTE	3.680e-13	37.23	Uncharacterized protein n=1 Tax=Capitella teleta T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011527	ABC transporter type 1, transmembrane domain	PFAM	PF00664	ABC_membrane	coord: 13..96 e-value: 1.1E-8 score: 35.1
IPR011527	ABC transporter type 1, transmembrane domain	PROSITE	PS50929	ABC_TM1F	coord: 13..97 score: 10.887
IPR036640	ABC transporter type 1, transmembrane domain superfamily	GENE3D	1.20.1560.10		coord: 1..97 e-value: 2.8E-21 score: 77.3
IPR036640	ABC transporter type 1, transmembrane domain superfamily	SUPERFAMILY	90123	ABC transporter transmembrane region	coord: 1..96
IPR030275	Multidrug resistance protein 3	PANTHER	PTHR24221:SF241	PHOSPHATIDYLCHOLINE TRANSLOCATOR ABCB4	coord: 3..97
IPR039421	Type I protein exporter	PANTHER	PTHR24221	FAMILY NOT NAMED	coord: 3..97
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..35
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 82..97
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 55..81
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 36..54
None	No IPR available	TMHMM	TMhelix		coord: 59..81
None	No IPR available	TMHMM	TMhelix		coord: 12..34

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig6865	contig	E_fasciculatus_S2_contig6865:607..1669 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig6865.14998.1	mRNA_E_fasciculatus_S2_contig6865.14998.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig6865 602..1669 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig6865.14998.1 ID=prot_E_fasciculatus_S2_contig6865.14998.1|Name=mRNA_E_fasciculatus_S2_contig6865.14998.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=97bp
MWSLNKGDWPWLVLGVIGAIIAGGTTPSEGVFIAHVQSNLYREDVDEMRT
IGNRWALGFVGLGLVALIGNFILSTGFAVAGERMTRSLRKMAFEAMV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR039421	Type_I_exporter
IPR030275	MDR3
IPR036640	ABC1_TM_sf
IPR011527	ABC1_TM_dom