prot_E_fasciculatus_S2_contig6843.14969.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6843.14969.1
Unique Nameprot_E_fasciculatus_S2_contig6843.14969.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length413
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6843.14969.1 vs. uniprot
Match: D7FNE3_ECTSI (Similar to zinc finger CCCH-type containing 12C n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE3_ECTSI)

HSP 1 Score: 311 bits (796), Expect = 4.140e-97
Identity = 174/221 (78.73%), Postives = 182/221 (82.35%), Query Frame = 0
Query:    1 MEMTAALCDVAQPSPEMKAVGLGLVDTLTLCYPGMMSPHQDGLLQMFAYCLEDANIGVRVAALKAACSYLQRLSPGPSGAAAFSSLWPKMTSVVEAAASSGDPVAAQEAREAVDGITLEQSGPPGGHAEGTSLET---TLEEPQGEMGHPLRTAASSQSTN------------VDSDIGTEQTGDSAVSQEPPLLLLAAEADQEAYLTAGRDERLTWKPSP 206
            MEM AA CD AQPSPE+K VGLGLV  LT CYPGMMSPHQDGLLQMFAY LEDA+IGVRVAALKAACSYLQRL PGPSGAAA SSLWPKM SVVEAAA+SGDPVAAQEAREAVDGIT+EQSG  GGHAEGTS+ET   TLEE QGE GHPL+TAAS QS +              SDIGTE T DSAV  +PPLLLLAAEADQEAYLTAGRDERLTWK SP
Sbjct:    1 MEMAAAFCDAAQPSPELKVVGLGLVSILTACYPGMMSPHQDGLLQMFAYSLEDADIGVRVAALKAACSYLQRLFPGPSGAAASSSLWPKMMSVVEAAANSGDPVAAQEAREAVDGITIEQSGAAGGHAEGTSIETSGPTLEELQGETGHPLQTAASVQSNDGHNGGNNGSDGRAGSDIGTEGTRDSAVLHDPPLLLLAAEADQEAYLTAGRDERLTWKRSP 221          
BLAST of mRNA_E_fasciculatus_S2_contig6843.14969.1 vs. uniprot
Match: A0A6H5JA30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA30_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 5.110e-50
Identity = 96/120 (80.00%), Postives = 103/120 (85.83%), Query Frame = 0
Query:   17 MKAVGLGLVDTLTLCYPGMMSPHQDGLLQMFAYCLEDANIGVRVAALKAACSYLQRLSPGPSGAAAFSSLWPKMTSVVEAAASSGDPVAAQEAREAVDGITLEQSGPPGGHAEGTSLETT 136
            MK VGLGLV  LT CYPGM+SPHQDGLLQMFAY  E A+IGVRVAALKAACSYLQRL PG   A A +SLWPKMTSVVEAAA SGDPVAAQEARE VDGIT+EQSG  GG++EGTSLET+
Sbjct:    1 MKVVGLGLVSILTACYPGMISPHQDGLLQMFAYSHEGADIGVRVAALKAACSYLQRLIPG---AVASASLWPKMTSVVEAAADSGDPVAAQEAREVVDGITIEQSGAAGGYSEGTSLETS 117          
BLAST of mRNA_E_fasciculatus_S2_contig6843.14969.1 vs. uniprot
Match: D7FNE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE2_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 4.640e-26
Identity = 73/120 (60.83%), Postives = 83/120 (69.17%), Query Frame = 0
Query:    1 MEMTAALCDVAQPSPEMKAVGLGLVDTLTLCYPGMMSPHQDGLLQMFAYCLEDANIGVRVAALKAACSYLQRLSPGPSGAAAFSSLWPKMTSVVEAAASSGDPVAAQEAREAVDGITLEQ 120
            M +T ALCD AQ SPEMK VGL LV+ L    PGMMSPHQDGLLQMF   LED  IGVRVAALKAACS+LQ    GPS A A  SL P++ SVVEA  ++GD  AA +  EA++ I   Q
Sbjct:  134 MALTVALCDAAQQSPEMKVVGLDLVNILAEFCPGMMSPHQDGLLQMFGASLEDPTIGVRVAALKAACSFLQDSLSGPSAAVA-PSLVPRIMSVVEATVNAGDESAAGDVLEALNVIAANQ 252          
BLAST of mRNA_E_fasciculatus_S2_contig6843.14969.1 vs. uniprot
Match: A0A6H5JCW6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW6_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 1.180e-24
Identity = 71/120 (59.17%), Postives = 80/120 (66.67%), Query Frame = 0
Query:    1 MEMTAALCDVAQPSPEMKAVGLGLVDTLTLCYPGMMSPHQDGLLQMFAYCLEDANIGVRVAALKAACSYLQRLSPGPSGAAAFSSLWPKMTSVVEAAASSGDPVAAQEAREAVDGITLEQ 120
            M +T ALCD AQ SPEMK VGL LV+ L    PGMMSPHQDGLLQMF   LED  IGVRVAALKAACS+LQ        AA   SL P++ SVVEA  +SGD  AA +  EA++ I   Q
Sbjct:  139 MALTVALCDAAQQSPEMKIVGLDLVNILAEFCPGMMSPHQDGLLQMFGASLEDPTIGVRVAALKAACSFLQ----DSLSAAVAPSLVPRIMSVVEATVNSGDEAAAGDVLEALNVIASNQ 254          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6843.14969.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FNE3_ECTSI4.140e-9778.73Similar to zinc finger CCCH-type containing 12C n=... [more]
A0A6H5JA30_9PHAE5.110e-5080.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNE2_ECTSI4.640e-2660.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCW6_9PHAE1.180e-2459.17Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 379..413
NoneNo IPR availableCOILSCoilCoilcoord: 292..332
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 252..348
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 252..348
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 2..121
e-value: 2.2E-12
score: 47.9
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 13..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6843contigE_fasciculatus_S2_contig6843:1217..8060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6843.14969.1mRNA_E_fasciculatus_S2_contig6843.14969.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6843 1217..8060 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6843.14969.1 ID=prot_E_fasciculatus_S2_contig6843.14969.1|Name=mRNA_E_fasciculatus_S2_contig6843.14969.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=413bp
MEMTAALCDVAQPSPEMKAVGLGLVDTLTLCYPGMMSPHQDGLLQMFAYC
LEDANIGVRVAALKAACSYLQRLSPGPSGAAAFSSLWPKMTSVVEAAASS
GDPVAAQEAREAVDGITLEQSGPPGGHAEGTSLETTLEEPQGEMGHPLRT
AASSQSTNVDSDIGTEQTGDSAVSQEPPLLLLAAEADQEAYLTAGRDERL
TWKPSPSGGGGGGGGSSFPLPAETSTEDIGTSADGTGVTGAHASTDTKGE
GQGGQKRPLPSRSDGVVRARSKSRWGPPPPRPARRSRFSAPLDDQQQQQQ
QQQQQQQQQQQQQQQQQQQQQKREKRREQEDEHAPLQAPPPPPRPPRFSA
CIDVGGDGSHPQQQLDHHHHEQKQQQHDAQQHDSQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR011989ARM-like