mRNA_E-fasciculatus_F_contig10871.707.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10871.707.1
Unique NamemRNA_E-fasciculatus_F_contig10871.707.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig10871.707.1 vs. uniprot
Match: D8LMW2_ECTSI (Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI)

HSP 1 Score: 538 bits (1386), Expect = 9.780e-182
Identity = 256/311 (82.32%), Postives = 282/311 (90.68%), Query Frame = 2
Query:  974 DEECEDDDMWGDPHMRGLRGQTINWSGVDGAWYSLVNDDNADLNVNVRVTAPLPDEFPDRQLMTGLAVLSERHSVTIEVENPYTTDTGGCPEGVSPCLANGGLRITVDGQEVEELLRFSRQVPVAAGAISVSASNLPVECRQFGGDKIWARMYQEILGGRRKLLGGESLEDWILRFDHKMPARRWCAKYIAENDLADLQSTHAIFKIETPTVTVRLNAGVNYQGDGELNWDGRVLPDVDFWQMDVGMHGLDIDNPALSGLLGETARPVYDGNGQAVMEGFGAFRGTVEDYRVSGALGVHFLLLDEKEEDYE 1906
            D++   DDMWGDPHMRGLRGQ INWSGVDG WYSLV DD+ADL++NVRVTAPLPDEFPDRQLMT LA++SE +SV IEVENPYT  TGGCPEGVSPCLANGGLRI VDGQEV+ELLRFSRQ+PVA G +++SASNLPVECRQFGG +IWARMYQ+IL  RR+L GGESLE+WILR+D  MPARRWCAKYIAENDLADLQ+ HAIFKI+TPTVTVRLNAGVNYQGDGELNWDGRVLPD++FWQMDVG+ GLD+DNPALSGLLGETARPVY  NG+AVMEG  AFRGTVEDYRVS ALGVHF LLDEKEE +E
Sbjct:    4 DDDDNADDMWGDPHMRGLRGQRINWSGVDGGWYSLVKDDHADLSINVRVTAPLPDEFPDRQLMTSLAIMSEGYSVVIEVENPYTIVTGGCPEGVSPCLANGGLRIIVDGQEVDELLRFSRQMPVADGTMTMSASNLPVECRQFGGHRIWARMYQDILEDRRQLRGGESLEEWILRYDQNMPARRWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVLPDLEFWQMDVGIDGLDVDNPALSGLLGETARPVYGENGEAVMEGSDAFRGTVEDYRVSSALGVHFALLDEKEEGHE 314          
BLAST of mRNA_E-fasciculatus_F_contig10871.707.1 vs. uniprot
Match: A0A6H5JS96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE)

HSP 1 Score: 513 bits (1320), Expect = 2.710e-170
Identity = 250/331 (75.53%), Postives = 281/331 (84.89%), Query Frame = 2
Query:  917 MGVCAEPGKHRHLQDEGDEDEECEDDD-MWGDPHMRGLRGQTINWSGVDGAWYSLVNDDNADLNVNVRVTAPLPDEFPDRQLMTGLAVLSERHSVTIEVENPYTTDTGGCPEGVSPCLANGGLRITVDGQEVEELLRFSRQVPVAAGAISVSASNLPVECRQFGGDKIWARMYQEILGGRRKLLGGESLEDWILRFDHKMPARRWCAKYIAENDLADLQSTHAIFKIETPTVTVRLNAGVNYQGDGELNWDGRVLPDVDFWQMDVGMHGLDIDNPALSGLLGETARPVYDGNGQAVMEGFGAFRGTVEDYRVSGALGVHFLLLDEKEEDYE 1906
            +GVC EPG     +        C   D + GDPHM+GLRGQ I+WSGVDG WYSL+ DDN D+N+NVR+TAPLPDEFPDRQLMT LAVLS+ HSV IEVENPYT  T GCPEGVSPCLANGGLRI VD Q+V+ELLRFSR VPVA GA++VS+SNLPVEC+QFGGD+IWARMYQ+++ GRR+L G ESLE+WIL++DH M A  WCAKYIAENDLADLQS HAIFKI+TPTVTVRLNAGVNYQG+GELNWDGRVLPD++FWQM VGM GLD+DNPALSGLLGETARPVYD NGQ VMEGF AFRGT+EDYRVS AL VHF LLDEKEE +E
Sbjct:   86 IGVCFEPGLSATCEASFSV---CPPGDAVCGDPHMQGLRGQRIDWSGVDGGWYSLIKDDNIDININVRLTAPLPDEFPDRQLMTSLAVLSKGHSVVIEVENPYTVVTNGCPEGVSPCLANGGLRIIVDSQQVDELLRFSRHVPVADGAMTVSSSNLPVECQQFGGDRIWARMYQDMIEGRRELHGDESLEEWILKYDHGMAAPGWCAKYIAENDLADLQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVLPDLEFWQMGVGMDGLDVDNPALSGLLGETARPVYDENGQVVMEGFDAFRGTIEDYRVSDALDVHFPLLDEKEEGHE 413          
BLAST of mRNA_E-fasciculatus_F_contig10871.707.1 vs. uniprot
Match: A0A6H5JP37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP37_9PHAE)

HSP 1 Score: 471 bits (1211), Expect = 8.950e-156
Identity = 226/311 (72.67%), Postives = 255/311 (81.99%), Query Frame = 2
Query:  974 DEECEDDDMWGDPHMRGLRGQTINWSGVDGAWYSLVNDDNADLNVNVRVTAPLPDEFPDRQLMTGLAVLSERHSVTIEVENPYTTDTGGCPEGVSPCLANGGLRITVDGQEVEELLRFSRQVPVAAGAISVSASNLPVECRQFGGDKIWARMYQEILGGRRKLLGGESLEDWILRFDHKMPARRWCAKYIAENDLADLQSTHAIFKIETPTVTVRLNAGVNYQGDGELNWDGRVLPDVDFWQMDVGMHGLDIDNPALSGLLGETARPVYDGNGQAVMEGFGAFRGTVEDYRVSGALGVHFLLLDEKEEDYE 1906
            D++   D +WGDPHMRGL GQ +NWSG DG WYSL+ DDNADL++NVRVTAPLPDEFPDRQLMT LA++SE +SV IEV+NPYTTDTGGCPE VSPC ANGGLRI VDG EV+ELLRFSRQ+P                    GG +IWARMYQ+IL GRR+L GGESLE+WILR+D  MPAR WCAKYIAENDLADLQ+ HAIFKI+TPTVTVRLNAGVNYQ +GELNWDGRVLPD++FWQ+DVG+ GLD+D PALSGL GETA PVYD NG+AVMEG+ AFRG VEDYRVS ALGVHF LLDE E  +E
Sbjct:    9 DDDDNADHIWGDPHMRGLLGQRVNWSGFDGGWYSLIKDDNADLHINVRVTAPLPDEFPDRQLMTSLAIMSEGYSVVIEVKNPYTTDTGGCPEDVSPCHANGGLRIIVDGHEVDELLRFSRQMP--------------------GGKRIWARMYQDILEGRRQLRGGESLEEWILRYDQNMPARTWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQSNGELNWDGRVLPDLEFWQIDVGIDGLDVDKPALSGLFGETACPVYDENGKAVMEGYDAFRGAVEDYRVSSALGVHFALLDETENGHE 299          
BLAST of mRNA_E-fasciculatus_F_contig10871.707.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 3.300e-106
Identity = 177/297 (59.60%), Postives = 221/297 (74.41%), Query Frame = 2
Query: 1007 DPHMRGLRGQTINWSGVDGAWYSLVNDDNADLNVNVRVTAPLPDEFPDRQLMTGLAVLSERHSVTIEVENPYTTDTG-GCPEGV-SPCLANGGLRITVDGQEVEELLRFSRQVPVAAGAISVSASNLPVECRQFGGDKIWARMYQEILGGRRKLLGGESLEDWILRFDHKMPARRWCAKYIAENDLADLQSTHAIFKIETPTVTVRLNAGVNYQGDGELNWDGRVLPDVDFWQMDVGMHGLDIDNPALSGLLGETARPVYDGNGQAVMEGFGAFRGTVEDYRVSGALGVHFLLLDEK 1891
            DPHM+GL GQ+I+W GVDG WYS V D + DL VNVR+TAPLPD+FPDRQL+TGL+V+SE HS+ +EV NPY+TD   GCP+G  +PCLANGGL +TVDG++   L+   R   +  G I VSA NLPV+C QFGG KIWAR Y+ IL  R+  L  +S EDW+L F   M A  WC +YI+E  L  +QS+HAI++I TP V VRLN G+ +Q   E++WDGRVLPD+D WQMDVG+ GL ++N AL+G+LGETARPVYD +G AVM G  A+RGT EDYRVSG LG+ F LL +K
Sbjct:  404 DPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDLRVNVRLTAPLPDDFPDRQLVTGLSVISEGHSLVLEVTNPYSTDLNDGCPDGSPTPCLANGGLSVTVDGEKNVGLIHPIRG-EILPGGIEVSADNLPVQCWQFGGHKIWARHYEAILARRK--LRAQSFEDWVLSFTD-MAAHDWCTEYISEKGLTGVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDVGLTGLSLENEALTGILGETARPVYDEDGHAVMAGDDAYRGTPEDYRVSGPLGMDFALLHQK 696          
BLAST of mRNA_E-fasciculatus_F_contig10871.707.1 vs. uniprot
Match: A0A6H5JP35_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP35_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 4.920e-100
Identity = 169/295 (57.29%), Postives = 215/295 (72.88%), Query Frame = 2
Query: 1025 LRGQTINWSGVDGAWYSLVNDDNADLNVNVRVTAPLPDEFPDRQLMTGLAVLSERHSVTIEVENPYTTDT-GGCPEGV-SPCLANGGLRITVDGQEVEE---LLRFSRQVPVAAGAISVSASNLPVECRQFGGDKIWARMYQE-ILGGRRKLLGGESLEDWILRFDHKMPARRWCAKYIAENDLADLQSTHAIFKIETPTVTVRLNAGVNYQGDGELNWDGRVLPDVDFWQMDVGMHGLDIDNPALSGLLGETARPVYDGNGQAVMEGFGAFRGTVEDYRVSGALGVHFLLLDEK 1891
            L GQ+I+W G+DG WYSLV D + DLNVNVR+TAP P+EFPDRQL+TGL+V++  HS+ IEV  PY TDT GGCP+G  +PCLANGGL + VDG++  +   LL   R   +  G I VSA+NLPV+C QFGGDKI AR Y   I+ GRR LL  E+ E+W+L F H M A  WC +YIA  DL+D+QS  AI++I TP V VR N G+ +Q  G +  DGR++PD+D W+MDVG+ GL ++N  L+G+LGETARPV D +G+AVM+G  A+RGT EDYRVSGALG  F LL +K
Sbjct:   61 LLGQSIDWFGIDGGWYSLVQDPDIDLNVNVRLTAPPPEEFPDRQLVTGLSVMAGGHSLVIEVTKPYDTDTAGGCPDGAPAPCLANGGLSVIVDGEKEADDSPLLHTIRDETLPGG-IQVSAANLPVQCWQFGGDKISARHYANTIMEGRRHLLS-ETFEEWVLSFQH-MAAHDWCTEYIAHKDLSDVQSAQAIYQIITPEVVVRFNVGIGHQTGGHVEMDGRIVPDLDVWEMDVGLAGLSLENETLTGILGETARPVLDEHGRAVMKGNKAYRGTPEDYRVSGALGTDFALLRQK 352          
BLAST of mRNA_E-fasciculatus_F_contig10871.707.1 vs. uniprot
Match: A0A6H5KYD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD0_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 2.550e-70
Identity = 141/304 (46.38%), Postives = 185/304 (60.86%), Query Frame = 2
Query:  986 EDDDMWGDPHMRGLRGQTINWSGVDGAWYSLVNDDNADLNVNVRVTAPLPDEFPDRQLMTGLAVLS-ERHSVTIEVENPYTTDTGGCPEGVSPCLANGGLRITVDGQEVEELLRFSRQVPVAAGAISVSASNLPVECRQFGGDKIWARMYQEI--LGGRRKLLGGESLEDWILRFDHKMPARRWCAKYIAENDLADL---QSTHAIFKIETPTVTVRLNAGVNYQGDGELNWDGR--VLPDVDFWQMDVGMHGLDIDNPALSGLLGETARPVYDGNGQAVMEGFGAFRGTVEDYRVSGALGVHF 1873
            +D  + GD HM GL GQ I+W G D  WY L+   N++  VN RVTAP+PDEFP RQL++G+++ S E  S+ +EV+NP TT+T GC    +PCLA G LRI VDG E   L      + +  G + VS++NLP ECR FGGD+IWA  +  +    GRR L G     DW+L  D  M A  WCA +  E  L+ L   QS  AI ++ET  VTVR++ GVNYQ D  L+ DG   ++P++DFWQ D+    L   +  L G+LG+TAR V D +G+ +  G  A RG VE  RVSG LGV F
Sbjct:    3 DDPQVSGDSHMVGLLGQEIDWYGEDSGWYCLLV--NSEFQVNARVTAPMPDEFPTRQLVSGVSIRSAEGPSLVVEVKNPITTETEGCSSTSAPCLAEGALRILVDGDESHALQSPVENLVLPGGDLVVSSANLPAECRPFGGDRIWAAQFAAMNDASGRRSLRGHTPFADWVLEAD-TMAAPGWCALFAREQRLSGLSSVQSNRAILRVETGGVTVRVDVGVNYQ-DSVLSSDGNAVLVPELDFWQTDIAFEELR-PSGELGGMLGDTARYVIDDDGKPITSGMEALRGPVETCRVSGPLGVDF 301          
BLAST of mRNA_E-fasciculatus_F_contig10871.707.1 vs. uniprot
Match: A0A6H5KVF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF3_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 1.760e-50
Identity = 139/340 (40.88%), Postives = 185/340 (54.41%), Query Frame = 2
Query:  890 SCGGRVCNDMGVCAEPGKHRHLQDEGDEDEECEDDDMWGDPHMRGLRGQTINWSGVDGAWYSLVNDDNADLNVNVRVTAPLPDEFPDRQLMTGLAVLSE-----RHSVTIEVENPYTTDTGGCPEGVSPCLANGGLRITVDGQEVEELLRFSRQVPVAAGA-ISVSASNLPVECRQFGGDKIWARMYQEILGGRRKLLGGESLEDWILRFDHKMPARRWCAKYIA-----ENDLADLQSTHAIFKIETPTVTVRLNAGVNYQGDGELNWDGRVLPDVDFWQMDVGMHGLDIDNPALSGLLGETARPVYDGNGQAVMEGFGAFRGTVEDYRVSGALGVHFL 1876
            SCG   C D  +C E  K  +    GDE     D  + GDPHM G  GQ  +++G DG WYS++ D N  +NVN+RVT+P+ D  P+   +TGL+VL+       HS+ IEV +P+  D+  CP GVSPCL +G L + +DG  VE L        VA GA + VSA+NLP  CR FG +K W R   E     R L    S+ +WIL  D        C +Y+A     E  +   QS H  F+I TP  TVRL+ G  +Q       D   LPD   WQM++ +H  D+ + A  G+LG+T  P  D +G+ +M G  A RG+ EDYRV GALGV F+
Sbjct:  285 SCGESGCPDGLICCE--KKDYCDVFGDE---SVDGVICGDPHMTGFLGQKFDFTGEDGGWYSVIADSN--MNVNMRVTSPVAD-LPEITYITGLSVLTTDTDGLEHSIVIEVIDPHNLDSS-CPAGVSPCLGDGALVVLLDG--VESLFAPGT---VALGADVEVSAANLPGACRSFGFEKYWERKKLENARAGRLLRTTPSMGEWILG-DPTATNMNECVEYVARAEAEEGGVFAHQSEHVSFQIVTPKATVRLSHGRLHQIAMRDPTDRFDLPDHLTWQMNMAIHHEDVSHAA-KGILGQTFVPTRDADGKPIMTGLEAIRGSEEDYRVDGALGVDFV 608          
BLAST of mRNA_E-fasciculatus_F_contig10871.707.1 vs. uniprot
Match: A0A6H5JW46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW46_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 1.660e-49
Identity = 124/300 (41.33%), Postives = 178/300 (59.33%), Query Frame = 2
Query: 1004 GDPHMRGLRGQTINWSGVDGAWYSLVNDDNADLNVNVRVTAPLPDEFPDRQLMTGLAVLS-----ERHSVTIEVENPYTTDTGGCPEGVSPCLANGGLRITVDGQEVEELLRFSRQVPVAAGAISVSASNLPVECRQFGGDKIWARMYQEILGGRRKLLGGESLEDWILRFDHKMPARRWCAKYIAEND-----LADLQSTHAIFKIETPTVTVRLNAGVNYQGDGELNWDGRVLPDVDFWQMDVGMHGLDIDNPALSGLLGETARPVYDGNGQAVMEGFGAFRGTVEDYRVSGALGVHF 1873
            GDPHM G  GQ  +++G DG +Y+L++D   ++++N+RVT+P+P   P+   +TGL++L+     E HS+ IEV+NP+  ++  CP GVSPCLA+G LR+ ++G+E    L     V +A G I V+A NLP ECR FG +  W R   E     R L G +S+ DW+L  D        C +Y+A+ +     L  LQS HA F+I TPT TVRL+ G  +Q       +   LPD   WQM++G+   ++   A +G+LGET+ P  D  GQ +M G  A RG+ EDYRV+G L V F
Sbjct:   89 GDPHMTGFLGQKFDFTGEDGGYYALISD-FPNMHMNMRVTSPVPS-LPEITYITGLSLLTTDANGEVHSIVIEVKNPHDIESA-CPAGVSPCLADGSLRVMLNGKEE---LSAPGSVALADGVI-VTAVNLPGECRSFGFEHYWERKKLENARHGRHL-GEQSMGDWLLG-DPTATNMDECMEYVAQAEGQAGGLFALQSEHASFQIVTPTATVRLSHGRLHQIATRDPTNRFDLPDHTTWQMNMGIDHNEVSYSA-TGILGETSTPTKDAYGQDIMTGMEAIRGSEEDYRVAGPLDVTF 378          
BLAST of mRNA_E-fasciculatus_F_contig10871.707.1 vs. uniprot
Match: D7G544_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G544_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 1.300e-45
Identity = 103/253 (40.71%), Postives = 156/253 (61.66%), Query Frame = 2
Query:  998 MWGDPHMRGLRGQTINWSGVDGAWYSLVNDDNADLNVNVRVTAPLPDEFPDRQLMTGLAVLSER-HSVTIEVENPY--------TTDTGGCPEGVSPCLANGGLRITVDGQEVEELLRFSRQVPVAAGAISVSASNLPVECRQFGGDKIWARM--YQEILGGRRKLLGGESLEDWILRFDHKMPARRWCAKYIAEND-----LADLQSTHAIFKIETPTVTVRLNAGVNYQGDGELNWDGRVLPDVDFWQMDV 1708
            +W DPH+ GLRGQ  +W G DG WY+ ++  +  L +N+RVT+ LP  FP+RQL+TG+A+++E  H++T ++ +P         T D  G     +PCL NGGLRITVDG+E    L+ + +     G I ++A NLP+EC++FG   +W  +   Q + GG R L   E++ DW++  D  M A  WC KY+ E +     LA ++S+HA+ +I TP +++R+N G+N + +  L  DGRV+P   FWQMDV
Sbjct:  242 IWDDPHLTGLRGQHFDWYGQDGGWYAFLSTPDQ-LQMNLRVTSHLPATFPERQLVTGVALVTEGGHTITADIVDPLDLAPTCHGTVDAVGS----APCLVNGGLRITVDGREQ---LQGAGEYDFD-GDIHITAVNLPLECQRFGDYMMWGDLDVEQRLRGGSRSLRSAETVFDWLVA-DSVMIAPAWCVKYLKELNGDVTALASMKSSHAVLRIGTPNLSLRVNVGINTEREQTLQ-DGRVVPTASFWQMDV 483          
BLAST of mRNA_E-fasciculatus_F_contig10871.707.1 vs. uniprot
Match: A0A6H5L5Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y7_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 4.130e-41
Identity = 116/305 (38.03%), Postives = 155/305 (50.82%), Query Frame = 2
Query: 1004 GDPHMRGLRGQTINWSGVDGAWYSLVNDDNADLNVNVRVTAPLPD--EFPDRQLMTGL--AVLSER------------HSVTIEVENPYTTDTGGCPEGVSPCLANGGLRITVDGQEVEELLRFSRQVPVAAGAISVSASNLPVECRQFGGDKIWARMYQEILGGRRKLLGGESLEDWILRFDHKMPARRWCAKYIA-----ENDLADLQSTHAIFKIETPTVTVRLNAGVNYQGDGELNWDGRVLPDVDFWQMDVGMHGLDIDNPALSGLLGETARPVYDGNGQAVMEGFGAFRGTVEDYRVSG 1855
            G PHM G  GQ  +++G DG WYS++ D N  +NVN+RVT+P       P  Q +     AVL  R            HS+ IEV  P++ D+  CP GVSPCLA+G LR+ +DG   +E L     V +  G + +SA NLP  CR FG +K W     E   G R+L    S+ +WIL  D        C +Y+A     E  +   QS HA F+I TP  TVRL+ G  +Q       D   LPD   WQM++ +    +   A  G+LGET  P  D +G+ +M G  A RGT ED +  G
Sbjct:    9 GGPHMTGFLGQKFDFTGEDGGWYSIIADSN--MNVNMRVTSPSSTCPRSPTSQRLGAYSSAVLERRLSVLTTDADGSDHSIVIEVAEPHSLDSS-CPAGVSPCLADGALRVLLDG---DEALFAHGTVSLGLG-VEISAVNLPGACRSFGFEKYWEHKKLEYATGGRQLRTQPSMGEWILG-DPTATNMDECVEYVARAEAEEGGMFAHQSEHASFQIVTPAATVRLSHGRLHQIAMRDPTDQYDLPDHLTWQMNLAVDHNQVSYAA-KGILGETFVPTRDASGKPIMTGMEAIRGTEEDCKCGG 304          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10871.707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LMW2_ECTSI9.780e-18282.32Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JS96_9PHAE2.710e-17075.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP37_9PHAE8.950e-15672.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNZ2_9PHAE3.300e-10659.60VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JP35_9PHAE4.920e-10057.29Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYD0_9PHAE2.550e-7046.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVF3_9PHAE1.760e-5040.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW46_9PHAE1.660e-4941.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G544_ECTSI1.300e-4540.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5Y7_9PHAE4.130e-4138.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10871contigE-fasciculatus_F_contig10871:811..4572 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size3000
Cds size1425
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10871.707.1prot_E-fasciculatus_F_contig10871.707.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10871 1902..4088 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927587.9157445-UTR-E-fasciculatus_F_contig10871:810..19011622927587.9157445-UTR-E-fasciculatus_F_contig10871:810..1901Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10871 811..1901 -
1695995608.9100442-UTR-E-fasciculatus_F_contig10871:810..19011695995608.9100442-UTR-E-fasciculatus_F_contig10871:810..1901Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10871 811..1901 -
1622927587.9907005-UTR-E-fasciculatus_F_contig10871:4088..45721622927587.9907005-UTR-E-fasciculatus_F_contig10871:4088..4572Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10871 4089..4572 -
1695995608.9511569-UTR-E-fasciculatus_F_contig10871:4088..45721695995608.9511569-UTR-E-fasciculatus_F_contig10871:4088..4572Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10871 4089..4572 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927587.9390292-CDS-E-fasciculatus_F_contig10871:1901..28241622927587.9390292-CDS-E-fasciculatus_F_contig10871:1901..2824Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10871 1902..2824 -
1695995608.9208574-CDS-E-fasciculatus_F_contig10871:1901..28241695995608.9208574-CDS-E-fasciculatus_F_contig10871:1901..2824Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10871 1902..2824 -
1622927587.9569585-CDS-E-fasciculatus_F_contig10871:3091..32791622927587.9569585-CDS-E-fasciculatus_F_contig10871:3091..3279Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10871 3092..3279 -
1695995608.9316628-CDS-E-fasciculatus_F_contig10871:3091..32791695995608.9316628-CDS-E-fasciculatus_F_contig10871:3091..3279Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10871 3092..3279 -
1622927587.9741566-CDS-E-fasciculatus_F_contig10871:3774..40881622927587.9741566-CDS-E-fasciculatus_F_contig10871:3774..4088Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10871 3775..4088 -
1695995608.9410992-CDS-E-fasciculatus_F_contig10871:3774..40881695995608.9410992-CDS-E-fasciculatus_F_contig10871:3774..4088Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10871 3775..4088 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10871.707.1

>prot_E-fasciculatus_F_contig10871.707.1 ID=prot_E-fasciculatus_F_contig10871.707.1|Name=mRNA_E-fasciculatus_F_contig10871.707.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=475bp
MIFLWNGGLGERHKGCSVSSRRNLCHFCGSWFWPTMCFRRRNDRNQRYPP
ARVLHVQLYVVTEMKFASLTAAAGVLMLDLSDAAYAGGTCYETSDCPGDG
RCRTCDGGDPGILGIGKTLGTCKAANNGGRCPGLLSCGGRVCNDMGVCAE
PGKHRHLQDEGDEDEECEDDDMWGDPHMRGLRGQTINWSGVDGAWYSLVN
DDNADLNVNVRVTAPLPDEFPDRQLMTGLAVLSERHSVTIEVENPYTTDT
GGCPEGVSPCLANGGLRITVDGQEVEELLRFSRQVPVAAGAISVSASNLP
VECRQFGGDKIWARMYQEILGGRRKLLGGESLEDWILRFDHKMPARRWCA
KYIAENDLADLQSTHAIFKIETPTVTVRLNAGVNYQGDGELNWDGRVLPD
VDFWQMDVGMHGLDIDNPALSGLLGETARPVYDGNGQAVMEGFGAFRGTV
EDYRVSGALGVHFLLLDEKEEDYE*
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mRNA from alignment at E-fasciculatus_F_contig10871:811..4572-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10871.707.1 ID=mRNA_E-fasciculatus_F_contig10871.707.1|Name=mRNA_E-fasciculatus_F_contig10871.707.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3762bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10871:811..4572- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGGGGGTACACTAATTTCAAGTTTAAGTCAGACGTCGACGACGTTTTCAT CTATATATATAATAATAACATGATATAACATGATGTTTTTGCGTCTAATA ATGCACACCGACGCCTTGGCCACCCTCATCTATATCCTCCTCGTATGGTG TCGCAAGCACTGAAAAATACCCTAGCCGACCGCTCGTGGAGATTTCCCCC CATATTTGTCACGTATCAAGCGAGACAGATTCTGCATTTTTTCCAGGCAG AGTTGGCAAAATGCAACATTATATGAAGAGTACGTCCATCTGATCGTCTG ATCGGAGTACAAGCAATCGCGCGCATGAGGTTGACATGGCCAAACATGGG TTAATGGGTGATGGTCTCTACATCACTCAGACATACACGCACTAAACGAT TGACGCAGCCTGACGAGTTCTTGTCATACGGAAATATTGTTTCGTCCGAA GCCCGCCAGTGCATGAATCCTACCGGTCTCCGCGATGATATTCCTGTGGA ACGGCGGACTCGGAGAGCGACACAAGGGGTGTTCTGTCTCGAGTAGGAGA AATCTGTGCCATTTTTGCGGCTCCTGGTTTTGGCCGACCATGTGCTTTCG ACGCCGGAACGACAGAAACCAACGTTATCCTCCCGCGCGCGTCCTTCACG TGCAACTATATGTAGTAACAGAGATGAAATTTGCTTCGCTGACGGCCGCG GCTGGGGTCCTGATGCTGGATTTAAGTGATGCTGCGTATGCAGGGGGTAC GTGCTACGAAACGAGCGACTGCCCCGGCGACGGCCGCTGCAGGACATGGT GAGTACGCCACCAGAGTGACTGGGATACTGTCGAAAAACATGGCGAGATA TCAGATTGGTCACGTGCTTTCTGCAATGTTTGGCCGCCTTCCATTTCCTC CATTGTGGTGAGCGTATTTTGACTGCCGGGGGAGGCTCGTGTACTTTCCT GGACCTGAGCAATGAGGAAAGCCAGCGTGTTTGAAGCATCCGAAAACCAC CGTAGAGTTTACGGTGTGGAGACCACCCGAACGAAAAAGGTTGGTATGAA AGATCGGTTTTGTGTGATGTCATACGCATTTTCAAACAGTATTTTCAAAC TGGTTGCGTGCATGCTGTACGATGGAGATGGTAAATAAAGCAGCTTGTTT AGGTTCTGGCTTAGTGCCCCTCTCTTTCTAACTCGTAAGTGTGTGTCTAA AGCATGGAACTATATCTGCTATGAGCAACCCGTACTTCGTCCACCCCACG CAAATGGCAAGAACGTTCCTTCTCGTTTCTCGGTTGTTGGCAGTGACGGA GGCGACCCAGGGATACTCGGCATTGGCAAAACATTAGGAACTTGCAAGGC AGCAAACAACGGCGGCCGCTGCCCGGGGTTGTTGTCGTGCGGTGGGCGGG TCTGCAACGACATGGGGGTGTGTGCTGAACCTGGAAAGCATCGCCATCTC CAAGACGAAGGAGACGAGGATGAAGAATGCGGTAAAATCCGATGCTACTC AGTGATGCGTCAGTTCGTTGCAAGTTTGGCTGGCCTTTCGCGTTTGTCAA CAGGAATTGCCTTGCCGATGACCACGTCGAGTTGAGGTCCCCCATGCCTC GGCGAGGTAGTTACCATGTTTCTTAGACGCACCCAGCCGGACATAAATAA GTCCATGAGCTGCTCGCCATGTTAATCTTGCCACACTTACCGGCTTGCCT TACGATCGTGTCTCCCTCGGCGGTCTAATGTGCCCTCGACCTACGTAGAG GACGACGACATGTGGGGCGACCCCCACATGAGAGGACTCCGCGGCCAGAC AATCAACTGGTCTGGGGTGGACGGCGCCTGGTACTCCCTGGTCAACGACG ACAACGCCGATCTCAACGTCAACGTTCGCGTCACCGCTCCTCTGCCAGAC GAGTTCCCCGACCGCCAGCTGATGACCGGCCTGGCTGTTCTGTCAGAGAG GCACTCTGTCACCATCGAGGTCGAAAACCCTTACACCACCGACACGGGTG GATGTCCTGAGGGCGTCTCGCCCTGCCTTGCGAATGGAGGACTGCGCATC ACGGTCGACGGCCAGGAAGTGGAGGAACTCCTTCGATTCTCCAGGCAGGT GCCGGTGGCAGCCGGTGCAATCTCCGTGTCTGCATCCAACCTTCCCGTGG AGTGCCGCCAGTTCGGCGGTGACAAGATATGGGCCCGCATGTACCAGGAA ATACTAGGCGGCAGGCGCAAGCTCCTCGGAGGTGAAAGCCTTGAAGACTG GATTCTGAGGTTCGACCACAAAATGCCGGCGCGCCGGTGGTGCGCCAAGT ACATCGCCGAGAACGACCTCGCCGACCTGCAATCTACCCACGCCATCTTC AAAATCGAGACACCCACTGTCACGGTGCGCCTCAACGCTGGTGTCAACTA CCAGGGCGACGGTGAGCTAAACTGGGATGGGCGCGTCCTTCCTGACGTTG ATTTCTGGCAGATGGACGTGGGGATGCACGGGCTGGACATTGACAACCCG GCGTTGTCCGGCCTCCTCGGTGAAACGGCCCGCCCGGTATACGACGGCAA CGGGCAAGCGGTAATGGAAGGGTTTGGCGCTTTCCGTGGCACCGTTGAGG ACTACCGCGTATCCGGCGCTCTGGGCGTGCACTTCCTCCTCCTCGACGAG AAGGAGGAGGACTATGAGTAAATCCTGTTGGGTCTACACGGCGATCTGTG GGATGCACGGGGGCTCAAAAAGGGGTCGACGTACTTCGGAGGCATGGAGT CCCCCGTACCTTGGACTCTCAAGGGCCACCTCTACGTATGATGTACTCAA CGCTAGATCTTCGGAGATCTAGGGGGTTTCCGGCATCATGTTTGATACTT GATGTGTTTGGATTTTTTTTCTCGTGCAGCGTGCGAGAGCTTCTTGCCGT GCTGCTACACGGAAGAATGGGTAAGGGAGTTTCGTGACATGTTTCTGGTA GCAGCATGAGAGATTTTCATTTCTTGCTTAGTGCAGTGCCCCAATGGCAG TGGGGATTGTGATCAGATGCACTGGTTATATCTTGTATTTGTGTTGAGAT CCACTTGTTTTCCTTTTGCTTCGGCATTCGTGAATATAGCATTTTACCTG CGGAGCTGGTATTTTGCCGACTTTTATTTGCGTTACCTTGGGTGAGTCAC AACGAGGAGGATGATGCTGGATTATATATTATGCTGGAGCCGTACTTACG GTTAAAGTCTTTCCTGATGCTTCCGTACGTAAGAGCTGAGAGCTTGAACA TTCATGAGTAGAGGTTGGTTTTGCTTTATATAGGTACTAGGGTTAAGTAT TGGCCCCCCGCCCCCCAAAGGGGTTGGGGGCCAACATCCAGGACGGAGGG CCGTAAGGGTTTGGGAGGGAGGAAGAAGAAAAAGGGATACGATTGGTCGG GGTGGAACGAAAGGAGGGTGTTGAGGGAGTCAATGGAGCGGTGAAAAAGT CGGTGACCGGACGAGCGTACCGTCCCGCGGGGAAACAAGTGACATGGCAT TCGGTGGTGTGGGCGTCGCAAAGCGAAAGTCGAAAAATGGAAGAATACAA TATTGTAATATATTGTAATAGTCGCATTCAAAACGTCGGCGAGAAAGCAT ACAGTGTACAGGAGTGGTTGCGCAGGAGGACGGATCCGCGCACCCGAGTC AAGGGAAGGATATATGTCACGAAGGGCCCGCGCTTGGACGCCGAATAAAA TCTCGTCCCCATGTCATACCCTGCAGGCAGGTGGTATCTCGTATCGAAGA ACCAAACAGCCC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10871:811..4572-

>mRNA_E-fasciculatus_F_contig10871.707.1 ID=mRNA_E-fasciculatus_F_contig10871.707.1|Name=mRNA_E-fasciculatus_F_contig10871.707.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2850bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10871:811..4572- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGATATTCCTGTGGAACGGCGGACTCGGAGAGCGACACAAGGGGTGTTC
TGTCTCGAGTAGGAGAAATCTGTGCCATTTTTGCGGCTCCTGGTTTTGGC
CGACCATGTGCTTTCGACGCCGGAACGACAGAAACCAACGTTATCCTCCC
GCGCGCGTCCTTCACGTGCAACTATATGTAGTAACAGAGATGAAATTTGC
TTCGCTGACGGCCGCGGCTGGGGTCCTGATGCTGGATTTAAGTGATGCTG
CGTATGCAGGGGGTACGTGCTACGAAACGAGCGACTGCCCCGGCGACGGC
CGCTGCAGGACATGATGATATTCCTGTGGAACGGCGGACTCGGAGAGCGA
CACAAGGGGTGTTCTGTCTCGAGTAGGAGAAATCTGTGCCATTTTTGCGG
CTCCTGGTTTTGGCCGACCATGTGCTTTCGACGCCGGAACGACAGAAACC
AACGTTATCCTCCCGCGCGCGTCCTTCACGTGCAACTATATGTAGTAACA
GAGATGAAATTTGCTTCGCTGACGGCCGCGGCTGGGGTCCTGATGCTGGA
TTTAAGTGATGCTGCGTATGCAGGGGGTACGTGCTACGAAACGAGCGACT
GCCCCGGCGACGGCCGCTGCAGGACATGTGACGGAGGCGACCCAGGGATA
CTCGGCATTGGCAAAACATTAGGAACTTGCAAGGCAGCAAACAACGGCGG
CCGCTGCCCGGGGTTGTTGTCGTGCGGTGGGCGGGTCTGCAACGACATGG
GGGTGTGTGCTGAACCTGGAAAGCATCGCCATCTCCAAGACGAAGGAGAC
GAGGATGAAGAATGCGTGACGGAGGCGACCCAGGGATACTCGGCATTGGC
AAAACATTAGGAACTTGCAAGGCAGCAAACAACGGCGGCCGCTGCCCGGG
GTTGTTGTCGTGCGGTGGGCGGGTCTGCAACGACATGGGGGTGTGTGCTG
AACCTGGAAAGCATCGCCATCTCCAAGACGAAGGAGACGAGGATGAAGAA
TGCGAGGACGACGACATGTGGGGCGACCCCCACATGAGAGGACTCCGCGG
CCAGACAATCAACTGGTCTGGGGTGGACGGCGCCTGGTACTCCCTGGTCA
ACGACGACAACGCCGATCTCAACGTCAACGTTCGCGTCACCGCTCCTCTG
CCAGACGAGTTCCCCGACCGCCAGCTGATGACCGGCCTGGCTGTTCTGTC
AGAGAGGCACTCTGTCACCATCGAGGTCGAAAACCCTTACACCACCGACA
CGGGTGGATGTCCTGAGGGCGTCTCGCCCTGCCTTGCGAATGGAGGACTG
CGCATCACGGTCGACGGCCAGGAAGTGGAGGAACTCCTTCGATTCTCCAG
GCAGGTGCCGGTGGCAGCCGGTGCAATCTCCGTGTCTGCATCCAACCTTC
CCGTGGAGTGCCGCCAGTTCGGCGGTGACAAGATATGGGCCCGCATGTAC
CAGGAAATACTAGGCGGCAGGCGCAAGCTCCTCGGAGGTGAAAGCCTTGA
AGACTGGATTCTGAGGTTCGACCACAAAATGCCGGCGCGCCGGTGGTGCG
CCAAGTACATCGCCGAGAACGACCTCGCCGACCTGCAATCTACCCACGCC
ATCTTCAAAATCGAGACACCCACTGTCACGGTGCGCCTCAACGCTGGTGT
CAACTACCAGGGCGACGGTGAGCTAAACTGGGATGGGCGCGTCCTTCCTG
ACGTTGATTTCTGGCAGATGGACGTGGGGATGCACGGGCTGGACATTGAC
AACCCGGCGTTGTCCGGCCTCCTCGGTGAAACGGCCCGCCCGGTATACGA
CGGCAACGGGCAAGCGGTAATGGAAGGGTTTGGCGCTTTCCGTGGCACCG
TTGAGGACTACCGCGTATCCGGCGCTCTGGGCGTGCACTTCCTCCTCCTC
GACGAGAAGGAGGAGGACTATGAGTAAAGGACGACGACATGTGGGGCGAC
CCCCACATGAGAGGACTCCGCGGCCAGACAATCAACTGGTCTGGGGTGGA
CGGCGCCTGGTACTCCCTGGTCAACGACGACAACGCCGATCTCAACGTCA
ACGTTCGCGTCACCGCTCCTCTGCCAGACGAGTTCCCCGACCGCCAGCTG
ATGACCGGCCTGGCTGTTCTGTCAGAGAGGCACTCTGTCACCATCGAGGT
CGAAAACCCTTACACCACCGACACGGGTGGATGTCCTGAGGGCGTCTCGC
CCTGCCTTGCGAATGGAGGACTGCGCATCACGGTCGACGGCCAGGAAGTG
GAGGAACTCCTTCGATTCTCCAGGCAGGTGCCGGTGGCAGCCGGTGCAAT
CTCCGTGTCTGCATCCAACCTTCCCGTGGAGTGCCGCCAGTTCGGCGGTG
ACAAGATATGGGCCCGCATGTACCAGGAAATACTAGGCGGCAGGCGCAAG
CTCCTCGGAGGTGAAAGCCTTGAAGACTGGATTCTGAGGTTCGACCACAA
AATGCCGGCGCGCCGGTGGTGCGCCAAGTACATCGCCGAGAACGACCTCG
CCGACCTGCAATCTACCCACGCCATCTTCAAAATCGAGACACCCACTGTC
ACGGTGCGCCTCAACGCTGGTGTCAACTACCAGGGCGACGGTGAGCTAAA
CTGGGATGGGCGCGTCCTTCCTGACGTTGATTTCTGGCAGATGGACGTGG
GGATGCACGGGCTGGACATTGACAACCCGGCGTTGTCCGGCCTCCTCGGT
GAAACGGCCCGCCCGGTATACGACGGCAACGGGCAAGCGGTAATGGAAGG
GTTTGGCGCTTTCCGTGGCACCGTTGAGGACTACCGCGTATCCGGCGCTC
TGGGCGTGCACTTCCTCCTCCTCGACGAGAAGGAGGAGGACTATGAGTAA
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