prot_E-fasciculatus_F_contig10867.702.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10867.702.1
Unique Nameprot_E-fasciculatus_F_contig10867.702.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length281
Homology
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BLAST of mRNA_E-fasciculatus_F_contig10867.702.1 vs. uniprot
Match: A0A6H5JHH9_9PHAE (Nucleoporin_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHH9_9PHAE)

HSP 1 Score: 466 bits (1200), Expect = 5.160e-153
Identity = 254/286 (88.81%), Postives = 264/286 (92.31%), Query Frame = 0 
Query:    1 QAGLEVLNGSWRHPSAFASPHQLVHLALREKARRQRALVRVLMDAGAWGASLGGRAALSECGEKIAAASRLCELQDSISRKSVGAKAAGLLEDCVKLSLRSREARAGAPAARVAVTSERDRYFEHTQGVLDAFVELHTPRLDEVAPSSSIDGASRAPLAKALLFDSSLEDGDKLPLLDLVSVVIAGVFEAALRHRASERSVYRAGVRGKLWTASSEARLILFRQLMAYNGSIDGIGLQGPGAAGRGGG-----SGEGTRGVIERLSVLLLDGFKEEKDANPAASGR 281
            +AGLEVLNGSWRHPSAFASPHQLVHLALREKARRQRALVRVLMDAGAWGA   GRAALSECGEK+AAASRLCELQDSISRK VGAKAAGLLEDCVK SLR+REAR+GA AA VAVTSERDRYFEHTQGVLDAFVELHTPRLDEVAPSSSIDGASR PLAKALLFDSSLE+GD+LPLLD VSVVIAGVFEAALRHRASERSVYR+G+RGKLWTASSEARL+LFRQL+AYNGSIDGI LQGPGAAG         S E T GVIERLSVLLLDGFKEEKDANPAASGR
Sbjct:  523 RAGLEVLNGSWRHPSAFASPHQLVHLALREKARRQRALVRVLMDAGAWGALSVGRAALSECGEKVAAASRLCELQDSISRKHVGAKAAGLLEDCVKFSLRNREARSGAAAA-VAVTSERDRYFEHTQGVLDAFVELHTPRLDEVAPSSSIDGASRTPLAKALLFDSSLEEGDRLPLLDHVSVVIAGVFEAALRHRASERSVYRSGLRGKLWTASSEARLVLFRQLLAYNGSIDGICLQGPGAAGXXXXXXXXVSREATSGVIERLSVLLLDGFKEEKDANPAASGR 807
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BLAST of mRNA_E-fasciculatus_F_contig10867.702.1 vs. uniprot
Match: D8LMM2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMM2_ECTSI)

HSP 1 Score: 457 bits (1176), Expect = 3.340e-149
Identity = 250/285 (87.72%), Postives = 258/285 (90.53%), Query Frame = 0 
Query:    1 QAGLEVLNGSWRHPSAFASPHQLVHLALREKARRQRALVRVLMDAGAWGASLGGRAALSECGEKIAAASRLCELQDSISRKSVGAKAAGLLEDCVKLSLRSREARAGAPAARVAV--TSERDRYFEHTQGVLDAFVELHTPRLDEVAPSSSIDGASRAPLAKALLFDSSLEDGDKLPLLDLVSVVIAGVFEAALRHRASERSVYRAGVRGKLWTASSEARLILFRQLMAYNGSIDGIGLQGPGAAGRGGGSGE--GTRGVIERLSVLLLDGFKEEKDANPAASGR 281
            QAGLEVLNGSWRHPSAFASPHQLVHLALREKARRQRALVRVL+DAGAWGAS  GRAALSECGEK+AAASRLCELQDSISRK VGAKAAGLLE CVKLSLR+REARAGA          SERDRYFEHTQGVLDAFVELHTPRLDEVAPSSSIDGASR PLAKALLFDSSLE+GD+LPLLD VSVVIAGVFEAALRHRASERSVYR+G+RGKLWTAS EARLILFRQL+AYNGSIDGI LQGPGAAGR        GT GVIERLSVLLLDGFKEEKDANPAASGR
Sbjct:  589 QAGLEVLNGSWRHPSAFASPHQLVHLALREKARRQRALVRVLLDAGAWGASSVGRAALSECGEKVAAASRLCELQDSISRKHVGAKAAGLLEGCVKLSLRNREARAGAXXXXXXXXXASERDRYFEHTQGVLDAFVELHTPRLDEVAPSSSIDGASRTPLAKALLFDSSLEEGDRLPLLDHVSVVIAGVFEAALRHRASERSVYRSGLRGKLWTASGEARLILFRQLLAYNGSIDGIYLQGPGAAGRXXXXXXXXGTSGVIERLSVLLLDGFKEEKDANPAASGR 873
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10867.702.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHH9_9PHAE5.160e-15388.81Nucleoporin_C domain-containing protein n=1 Tax=Ec... [more]
D8LMM2_ECTSI3.340e-14987.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.700coord: 9..235
e-value: 3.1E-6
score: 28.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10867contigE-fasciculatus_F_contig10867:170..3929 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10867.702.1mRNA_E-fasciculatus_F_contig10867.702.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10867 170..3929 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10867.702.1 ID=prot_E-fasciculatus_F_contig10867.702.1|Name=mRNA_E-fasciculatus_F_contig10867.702.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=281bp
QAGLEVLNGSWRHPSAFASPHQLVHLALREKARRQRALVRVLMDAGAWGA
SLGGRAALSECGEKIAAASRLCELQDSISRKSVGAKAAGLLEDCVKLSLR
SREARAGAPAARVAVTSERDRYFEHTQGVLDAFVELHTPRLDEVAPSSSI
DGASRAPLAKALLFDSSLEDGDKLPLLDLVSVVIAGVFEAALRHRASERS
VYRAGVRGKLWTASSEARLILFRQLMAYNGSIDGIGLQGPGAAGRGGGSG
EGTRGVIERLSVLLLDGFKEEKDANPAASGR
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