prot_E-fasciculatus_F_contig10866.701.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10866.701.1
Unique Nameprot_E-fasciculatus_F_contig10866.701.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length229
Homology
BLAST of mRNA_E-fasciculatus_F_contig10866.701.1 vs. uniprot
Match: D7FME9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME9_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.650e-14
Identity = 60/162 (37.04%), Postives = 80/162 (49.38%), Query Frame = 0
Query:   67 PGPRPISKVLVVAGMIWVLSAVWPITLVIGLCGQSSQSETRRSRPAARRSAGSRVRSSPPVPNTWREGGWLVMMRARHQRSLARPKGYMAKLRQLREGRRKYSVEFPTATSGGPVRAGNQDDSDIELAEEGLSASRTGFRRVVVTVVAIEEEGLFRHIITYL 228
            PG R +  +      + + + + P+ L I LC           R AAR  A  R+R+  P    W  GGWL+M+RARHQR LARPKG+  +LR+L        V              ++   ++EL E G S  R  F R V  VV I EEGLFRHII++L
Sbjct:  150 PGARALLGLTQFCLEMVICTLLGPLPLAILLCWYFHHFYVVVPRQAARERAVERLRTF-PGQRRWHAGGWLIMIRARHQRFLARPKGWPIRLRKLERFNEANIV--------------HKIPPELELLEAGRS--RMNFVRAVTAVVEINEEGLFRHIISFL 294          
BLAST of mRNA_E-fasciculatus_F_contig10866.701.1 vs. uniprot
Match: D8LNC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC9_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 4.270e-8
Identity = 39/90 (43.33%), Postives = 50/90 (55.56%), Query Frame = 0
Query:  139 MMRARHQRSLARPKGYMAKLRQLREGRRKYSVEFPTATSGGPVRAGNQDDSDIELAEEGLSASRTGFRRVVVTVVAIEEEGLFRHIITYL 228
            MMRAR QRSLAR KG+ A+LR+L        +++           G+Q   +IEL E G    +  F R V   + I EEGLFRHII+YL
Sbjct:    1 MMRARRQRSLARSKGWQARLRKLDHYDEANIMKYAMRDF-----MGSQTPPEIELLEAGRL--KMNFVRAVTAAIEIPEEGLFRHIISYL 83          
BLAST of mRNA_E-fasciculatus_F_contig10866.701.1 vs. uniprot
Match: D8LNB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB4_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 1.180e-7
Identity = 39/91 (42.86%), Postives = 52/91 (57.14%), Query Frame = 0
Query:  139 MMRARHQRSL-ARPKGYMAKLRQLREGRRKYSVEFPTATSGGPVRAGNQDDSDIELAEEGLSASRTGFRRVVVTVVAIEEEGLFRHIITYL 228
            MMRARH+RS  AR KG+ A+LR+L        +++           G Q   +IEL E G    +  F R V+ VV I+EEGLFRHI++YL
Sbjct:    1 MMRARHERSSSARSKGWRARLRKLERYDEASIIKYAMRDF-----MGGQTPPEIELLEAGRL--KMNFVRAVIAVVEIQEEGLFRHIMSYL 84          
BLAST of mRNA_E-fasciculatus_F_contig10866.701.1 vs. uniprot
Match: D7FMF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF1_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 4.720e-6
Identity = 37/90 (41.11%), Postives = 49/90 (54.44%), Query Frame = 0
Query:  139 MMRARHQRSLARPKGYMAKLRQLREGRRKYSVEFPTATSGGPVRAGNQDDSDIELAEEGLSASRTGFRRVVVTVVAIEEEGLFRHIITYL 228
            M+RARHQRSL R  G+  +LR+L E   K ++              N+   ++EL E G S  R  F R  + VV   EEGLFRHII++L
Sbjct:    1 MLRARHQRSLGRSTGWPVRLRKL-ERYNKANIF-------------NKIPPELELLEAGRS--RMNFARAAMAVVETNEEGLFRHIISFL 74          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10866.701.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FME9_ECTSI1.650e-1437.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNC9_ECTSI4.270e-843.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNB4_ECTSI1.180e-742.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FMF1_ECTSI4.720e-641.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 98..228
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 64..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..97
NoneNo IPR availableTMHMMTMhelixcoord: 38..60
NoneNo IPR availableTMHMMTMhelixcoord: 75..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10866contigE-fasciculatus_F_contig10866:1085..2963 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10866.701.1mRNA_E-fasciculatus_F_contig10866.701.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10866 484..3768 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10866.701.1 ID=prot_E-fasciculatus_F_contig10866.701.1|Name=mRNA_E-fasciculatus_F_contig10866.701.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=229bp
MLLTPTVGRVLIPSHLAPPHPPEMCLLKVRRYVKFSRASTCDGSPTLPWI
LVVCVMLSFRDRRQICPGPRPISKVLVVAGMIWVLSAVWPITLVIGLCGQ
SSQSETRRSRPAARRSAGSRVRSSPPVPNTWREGGWLVMMRARHQRSLAR
PKGYMAKLRQLREGRRKYSVEFPTATSGGPVRAGNQDDSDIELAEEGLSA
SRTGFRRVVVTVVAIEEEGLFRHIITYL*
back to top