mRNA_E-fasciculatus_F_contig10862.698.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10862.698.1 vs. uniprot
Match: D7G511_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G511_ECTSI) HSP 1 Score: 423 bits (1087), Expect = 3.180e-143 Identity = 225/244 (92.21%), Postives = 230/244 (94.26%), Query Frame = 1
Query: 1 QAWLQYQHARHLSTFHDLHALMAFAAMANGVEDDAEAEYWKSRTRDLLESMGEYVRSGGETPAAXXXXXXXXXXXX-SEALPTPTAATPPAAAVELHAFPVSRNRGVGGDADEGAGEGPPDNLWVAEHVGLPLCRAMAAYRGGEFDKAVSLLLPLRYHLDAIGGSKAQQDVVHLTLLDAALRLPEKAMVARTLVCERRLQRPTSGRAWEAFATVMERDGDMRQAFEARKLSFEFGIGQGGVGAN 729
+AWLQYQHARHLSTFHDLHALMAFAAMANGVEDDAEAEYW+SRTR+LLESMGEYV+SGGE PAAXXXXXXXXX SE P TAATP AA VELHAFPVSRNRGVGGDADEG EGPPDNLWVAEHVGLPLCRAMAAYRGGEFD+AVSLLLPLRYHLDAIGGSKAQQDVVHLTLLDAALRLPEKA VARTLVCERRLQRPTSGRAWEAFATVMERDGDMRQAFEARKLSFEFGIGQGGVGAN
Sbjct: 372 EAWLQYQHARHLSTFHDLHALMAFAAMANGVEDDAEAEYWESRTRELLESMGEYVKSGGEAPAAXXXXXXXXXPAGGSEPTPASTAATPTAAPVELHAFPVSRNRGVGGDADEGGVEGPPDNLWVAEHVGLPLCRAMAAYRGGEFDEAVSLLLPLRYHLDAIGGSKAQQDVVHLTLLDAALRLPEKATVARTLVCERRLQRPTSGRAWEAFATVMERDGDMRQAFEARKLSFEFGIGQGGVGAN 615
BLAST of mRNA_E-fasciculatus_F_contig10862.698.1 vs. uniprot
Match: A0A7S2UTL4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTL4_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 2.000e-16 Identity = 47/130 (36.15%), Postives = 77/130 (59.23%), Query Frame = 1
Query: 352 PPDNLWVAEHVGLPLCRAMAAYRGGEFDKAVSLLL----PLRYHLDAIGGSKAQQDVVHLTLLDAALRLPEKAMVARTLVCERRLQRPTSGRAWEAFATVMERDGDMRQAFEARKLSFEFGIGQGGVGAN 729
PPDN V +G+P+ A+A++ ++ +++ LL P A+GGS AQ+D + LTL++A R E +A+ L+ ER + +PTSG AWE +A ++ GD+ A A +++ G+GQ G GA+
Sbjct: 46 PPDNAVVEAQLGVPVANALASFIEEDYHQSIGSLLALGVPRTAQAVAMGGSHAQRDFLALTLIEACTRA-EHLPLAKALMAERLMNKPTSGMAWETYARILGLMGDIDGAHFAWDRAYDLGLGQAGHGAH 174
BLAST of mRNA_E-fasciculatus_F_contig10862.698.1 vs. uniprot
Match: A0A437QIC5_9PROT (Tetratricopeptide repeat protein n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A437QIC5_9PROT) HSP 1 Score: 86.7 bits (213), Expect = 6.790e-16 Identity = 43/87 (49.43%), Postives = 60/87 (68.97%), Query Frame = 1
Query: 361 NLWVAEHVGLPLCRAMAAYRGGEFDKAVSLLLPLRYHLDAIGGSKAQQDVVHLTLLDAALRLPEKAMVARTLVCERRLQRPTSGRAW 621
N+ + VGLP CRA+AA+ G++D+AV LL P+RY +GGS AQ+DV+HLTL++AALR + AR L+ ER +PTS + W
Sbjct: 347 NVAMTREVGLPFCRAIAAFAKGDYDEAVDLLHPIRYRTAKLGGSHAQRDVIHLTLIEAALRCGRHKL-ARALISERTELKPTSPQNW 432
BLAST of mRNA_E-fasciculatus_F_contig10862.698.1 vs. uniprot
Match: UPI00167D4382 (tetratricopeptide repeat protein n=1 Tax=Streptomyces longisporoflavus TaxID=28044 RepID=UPI00167D4382) HSP 1 Score: 84.7 bits (208), Expect = 3.170e-15 Identity = 46/112 (41.07%), Postives = 68/112 (60.71%), Query Frame = 1
Query: 361 NLWVAEHVGLPLCRAMAAYRGGEFDKAVSLLLPLRYHLDAIGGSKAQQDVVHLTLLDAALRLPEKAMVARTLVCERRLQRPTSGRAWEAFATVMERDGDMRQAFEARKLSFE 696
N + +G+P+CRA+ AYR ++ + V LL P+RYHL++ GGS AQ+D + TL++AA+R + ARTL+ ER RP W A A + +R GD +A AR + E
Sbjct: 351 NHAMTREIGIPVCRALIAYRQQQYGRVVELLAPIRYHLNSFGGSHAQRDAIQRTLVEAAIRSGRHDL-ARTLLSERINLRPICPYNWRARARLDDRLGDAARAAAARARAEE 461
BLAST of mRNA_E-fasciculatus_F_contig10862.698.1 vs. uniprot
Match: UPI0006EB83DF (tetratricopeptide repeat protein n=1 Tax=Streptomyces TaxID=1883 RepID=UPI0006EB83DF) HSP 1 Score: 83.6 bits (205), Expect = 7.980e-15 Identity = 55/122 (45.08%), Postives = 68/122 (55.74%), Query Frame = 1
Query: 361 NLWVAEHVGLPLCRAMAAYRGGEFDKAVSLLLPLRYHLDAIGGSKAQQDVVHLTLLDAALRLPEKAMVARTLVCERRLQRPTSGRAWEAFATVMERDGDMRQAFEARKLSFEFGIGQGGVGA 726
N + VGLP+CRA+ AY D+AV LLLP+R+ L A GGS AQ+D VH TLL+AALR + ARTL+ ER RP W A A + + G QA AR + GQ GA
Sbjct: 351 NRAMTADVGLPVCRALIAYGQERHDQAVDLLLPVRHRLGAYGGSHAQRDAVHKTLLEAALRAGRHEL-ARTLLSERINLRPVCPYNWLAQARLADELGQGAQAAAARATA----AGQAAEGA 467
BLAST of mRNA_E-fasciculatus_F_contig10862.698.1 vs. uniprot
Match: A0A829YJP0_9GAMM (Tetratricopeptide repeat protein 38 family protein n=5 Tax=Steroidobacter TaxID=469322 RepID=A0A829YJP0_9GAMM) HSP 1 Score: 83.2 bits (204), Expect = 1.080e-14 Identity = 44/110 (40.00%), Postives = 65/110 (59.09%), Query Frame = 1
Query: 349 GPPDNLWVAEHVGLPLCRAMAAYRGGEFDKAVSLLLPLRYHLDAIGGSKAQQDVVHLTLLDAALRLPEKAMVARTLVCERRLQRPTSGRAWEAFATVMERDGDMRQAFEA 678
G N + VGLPL +A+ A+ G + + V L P+R + GGS AQ+D++HLTL+++ALR ++ +AR L+ ER +P+S W+ A VME GDM A A
Sbjct: 342 GSDTNAMMTRDVGLPLAKALVAFAEGNYSEVVRQLQPIRTIANRFGGSNAQRDLIHLTLVESALR-SDQVRLARALIAERTQLKPSSPSNWQLTARVMEMGGDMGAAARA 450
BLAST of mRNA_E-fasciculatus_F_contig10862.698.1 vs. uniprot
Match: A0A5P2CAI2_STRVZ (Tetratricopeptide repeat-containing protein n=8 Tax=Streptomyces TaxID=1883 RepID=A0A5P2CAI2_STRVZ) HSP 1 Score: 82.0 bits (201), Expect = 2.750e-14 Identity = 51/119 (42.86%), Postives = 71/119 (59.66%), Query Frame = 1
Query: 340 AGEGPPDNLWVAEHVGLPLCRAMAAYRGGEFDKAVSLLLPLRYHLDAIGGSKAQQDVVHLTLLDAALRLPEKAMVARTLVCERRLQRPTSGRAWEAFATVMERDGDMRQAFEARKLSFE 696
+G G ++ A+ +GLP+CRA+ AY +D+AV LLLP+R+ L GGS AQ+D VH TLL+AALR + +RTL+ ER RP W A A + + GD +A AR + E
Sbjct: 351 SGSGVSNHAMTAD-IGLPVCRALIAYGEHHYDRAVELLLPVRHRLAEYGGSHAQRDAVHKTLLEAALRAGRHDL-SRTLLSERINLRPVCPYNWLAQARLADALGDDARAAVARARADE 467
BLAST of mRNA_E-fasciculatus_F_contig10862.698.1 vs. uniprot
Match: UPI001C68F533 (tetratricopeptide repeat protein n=1 Tax=Actinomadura sp. PM05-2 TaxID=2864039 RepID=UPI001C68F533) HSP 1 Score: 81.6 bits (200), Expect = 3.620e-14 Identity = 49/107 (45.79%), Postives = 62/107 (57.94%), Query Frame = 1
Query: 361 NLWVAEHVGLPLCRAMAAYRGGEFDKAVSLLLPLRYHLDAIGGSKAQQDVVHLTLLDAALRLPEKAMVARTLVCERRLQRPTSGRAWEAFATVMERDGDMRQAFEAR 681
N + VGLP+CRA+AA+ GE V LL P+R+ + GGS AQ+D V TLL++ALR + +ARTLV ER RP+S W A V E GD A AR
Sbjct: 351 NRAMTARVGLPVCRALAAFGRGEHGNVVDLLAPIRHRVHEFGGSHAQRDAVQRTLLESALR-SGRTNLARTLVSERIGVRPSSPYNWLKHAAVAEAVGDRATAATAR 456
BLAST of mRNA_E-fasciculatus_F_contig10862.698.1 vs. uniprot
Match: UPI0011466EA8 (tetratricopeptide repeat protein n=1 Tax=Actinomadura sp. WMMA1423 TaxID=2591108 RepID=UPI0011466EA8) HSP 1 Score: 81.6 bits (200), Expect = 3.620e-14 Identity = 50/107 (46.73%), Postives = 60/107 (56.07%), Query Frame = 1
Query: 361 NLWVAEHVGLPLCRAMAAYRGGEFDKAVSLLLPLRYHLDAIGGSKAQQDVVHLTLLDAALRLPEKAMVARTLVCERRLQRPTSGRAWEAFATVMERDGDMRQAFEAR 681
N + VGLP+CRA+AAY G+ V LL P+R+H+ GGS AQ+D V TLL AALR + +AR LV ER RP S W A V E GD A AR
Sbjct: 351 NQAMTARVGLPVCRALAAYGRGDHTAVVDLLAPIRHHVYEFGGSHAQRDAVQKTLLQAALR-SGRLTLARVLVSERISARPDSPFNWLKHADVAEALGDKATATTAR 456
BLAST of mRNA_E-fasciculatus_F_contig10862.698.1 vs. uniprot
Match: A0A7X0LPE0_9ACTN (Tetratricopeptide (TPR) repeat protein n=2 Tax=Streptomyces candidus TaxID=67283 RepID=A0A7X0LPE0_9ACTN) HSP 1 Score: 80.1 bits (196), Expect = 1.230e-13 Identity = 46/110 (41.82%), Postives = 64/110 (58.18%), Query Frame = 1
Query: 352 PPDNLWVAEHVGLPLCRAMAAYRGGEFDKAVSLLLPLRYHLDAIGGSKAQQDVVHLTLLDAALRLPEKAMVARTLVCERRLQRPTSGRAWEAFATVMERDGDMRQAFEAR 681
P N + VGLP+C A+ A+ G ++ V LLLP+R+ L GGS AQ+D VH TLL+AALR + +AR+L+ ER RP W A A + ++ G +A AR
Sbjct: 345 PVSNRAMTADVGLPVCEALLAHGTGRYEAVVELLLPVRHRLAGFGGSHAQRDAVHKTLLEAALR-SRRTDLARSLISERLSLRPACPYNWLAQARLADQLGRHAEAATAR 453 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10862.698.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10862.698.1 >prot_E-fasciculatus_F_contig10862.698.1 ID=prot_E-fasciculatus_F_contig10862.698.1|Name=mRNA_E-fasciculatus_F_contig10862.698.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=244bp QAWLQYQHARHLSTFHDLHALMAFAAMANGVEDDAEAEYWKSRTRDLLESback to top mRNA from alignment at E-fasciculatus_F_contig10862:472..2202+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10862.698.1 ID=mRNA_E-fasciculatus_F_contig10862.698.1|Name=mRNA_E-fasciculatus_F_contig10862.698.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1731bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10862:472..2202+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10862:472..2202+ >mRNA_E-fasciculatus_F_contig10862.698.1 ID=mRNA_E-fasciculatus_F_contig10862.698.1|Name=mRNA_E-fasciculatus_F_contig10862.698.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1464bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10862:472..2202+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |