prot_E-fasciculatus_F_contig1086.696.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1086.696.1
Unique Nameprot_E-fasciculatus_F_contig1086.696.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length228
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1086.696.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 173..194
e-value: 45.0
score: 10.2
coord: 149..167
e-value: 480.0
score: 1.8
coord: 197..215
e-value: 11.0
score: 15.0
NoneNo IPR availablePANTHERPTHR24373SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEINcoord: 41..221
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 84..221
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 197..220
e-value: 0.35
score: 19.9
coord: 173..196
e-value: 0.14
score: 21.3
coord: 152..172
e-value: 44.0
score: 8.0
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 175..225
e-value: 3.2E-10
score: 39.6
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 151..166
e-value: 0.081
score: 13.0
coord: 84..100
e-value: 0.43
score: 10.8
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 199..220
score: 7.45
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 114..135
score: 5.225
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 151..172
score: 7.774
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 175..196
score: 7.473
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 68..227
e-value: 7.0E-25
score: 89.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1086contigE-fasciculatus_F_contig1086:3460..8821 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1086.696.1mRNA_E-fasciculatus_F_contig1086.696.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1086 3460..8821 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1086.696.1 ID=prot_E-fasciculatus_F_contig1086.696.1|Name=mRNA_E-fasciculatus_F_contig1086.696.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=228bp
TNHSSRQSSDQGLLDQPKNNRGRLRWYYHHRCCIMPVNKMLSGLALLLCS
SLMANVAAETTSSPADINPCLDPSTGRTVSETGTLDLSSCNLEDTDIEAL
IAYIQAVIDTTATPIVELNLSGNSLTQLTASGSGRRALLPSDSIFAGLED
TLEVLDLSDNEIEDIGTGEFDGLDNLVALDVSDNEISELEGEAFEGLTSL
TTLSISNNPIENIDPDTLALLQALLLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR003591Leu-rich_rpt_typical-subtyp