mRNA_E-fasciculatus_F_contig108.639.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig108.639.1 vs. uniprot
Match: D7FVB5_ECTSI (Protein phosphatase type 2A regulator/ signal transducer n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVB5_ECTSI) HSP 1 Score: 646 bits (1667), Expect = 4.980e-221 Identity = 358/430 (83.26%), Postives = 372/430 (86.51%), Query Frame = 3
Query: 954 SILS*PWLGRGGTTRS*QGHLTGLCAVGTRWRGTSARQCTST----GGVTSVAWEPGGEARGGRFLTGCMDARIRLFSLDSPEVEQSVLSERAVTAVAFCPGGQRFAAGGIAGNVEFYRMDNMSLELTVECRRHGFRHSAAQRTRLATSPVRRLSVGTGEGRSNXXXXXXXXXXXXXXXXXXXXXXXXXX--NTLGSRAGARVPGDVEERVTGLCFRPQPKGTAELARDCSDSDGEEHRLSGASRSTAGKMGEYSQEVAPSPRVGGEVVAPQADEKDANGSGNLWAERLEADLLVSTNDNRSRILVSGERGVTVGFKLKGHSTEGELGRHTAARYSDDGNFIVSGSTDGNVHVWSTPTTAPGTKSVTWSSGREGHERARVCDKKVGVPVAFFAPASVAKNLGGASSRVIVTGDDEGNCKIFCERRAEREP 2225
S+++ W G + T C W +C+ GGVTSVAWEPGGEA GGRFLTGCMDARIRLFSLDSPEVEQSVLSERAVTAVAFCPGGQ FAAGGIAGNVEFYRM+NMSLELTVECRRHGFRHSAAQRTRLATSPVRRLSVGTG+GRSN XXXXXXXXXXXXXXXXXXX NTLGSRAGARVPG VEERVTGLCFRP KG AELA DCSDSDGEEHRLSGASRST GKMGE SQEVAPSPR GGEVVAPQADEKDANGSGNLW ERLEADLLVSTNDNRSRILVSGERGVTVGFKLKGHSTEGELGRHTAARYSDDGN IVSG+TDG+VHVW TPTT PGTKSVTWSSGREGHERARVCDK+VGVPVAFFAPASVAKNLGG SSRVIVTGD+EGNCKIFCE+RA+ EP
Sbjct: 319 SVVALAWAGGDNALLTGSSDGTVRC-----WHPLEGNECSEVYEHGGGVTSVAWEPGGEAHGGRFLTGCMDARIRLFSLDSPEVEQSVLSERAVTAVAFCPGGQSFAAGGIAGNVEFYRMENMSLELTVECRRHGFRHSAAQRTRLATSPVRRLSVGTGDGRSNGAGGDRVXXXXXXXXXXXXXXXXXXXXXNTLGSRAGARVPGTVEERVTGLCFRPPTKGPAELAGDCSDSDGEEHRLSGASRSTGGKMGENSQEVAPSPRAGGEVVAPQADEKDANGSGNLWVERLEADLLVSTNDNRSRILVSGERGVTVGFKLKGHSTEGELGRHTAARYSDDGNLIVSGATDGSVHVWPTPTTPPGTKSVTWSSGREGHERARVCDKRVGVPVAFFAPASVAKNLGGTSSRVIVTGDNEGNCKIFCEQRADGEP 743
BLAST of mRNA_E-fasciculatus_F_contig108.639.1 vs. uniprot
Match: A0A8H5A034_FUSOX (Uncharacterized protein n=1 Tax=Fusarium oxysporum TaxID=5507 RepID=A0A8H5A034_FUSOX) HSP 1 Score: 60.5 bits (145), Expect = 2.220e-6 Identity = 36/115 (31.30%), Postives = 53/115 (46.09%), Query Frame = 2
Query: 734 AISLSPSGAFLATCGMDRRCCVFRVQKRRQTTALGEGSPNAAAADQGMSRQLNFSSVEGRLVDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGDECSAVYEH 1078
A SPSG +LA G DR +F+V + + N L S+ + +P R GH ++ L+W+ D LL+GS+D TVR WHP + C V++H
Sbjct: 74 AAEFSPSGRYLAVAGKDRSIKLFKVISTEEERLAQQRCENGTI--------LGSKSLSAPVFLSRPYREFKGHSAEILTLSWSKND-FLLSGSTDKTVRLWHPSQ-PTCLRVFQH 178
BLAST of mRNA_E-fasciculatus_F_contig108.639.1 vs. uniprot
Match: A0A196S6S1_BLAHN (Uncharacterized protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S6S1_BLAHN) HSP 1 Score: 59.7 bits (143), Expect = 1.250e-5 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 3
Query: 1086 VTSVAWEPGGEARGGRFLTGCMDARIRLFSLDSPEVEQSVLSERAVTAVAFCPGGQRFAAGGIAGNVEFYRMDNMSLELTVECR-RHG 1346
VTSV + P EA F++GCMD ++R++S+ V + + +T V FCPGG+ AAG G V FY D + +ECR RHG
Sbjct: 168 VTSVDFYPEEEAY---FISGCMDRKLRVWSIPQGCVLKWTQAPSVITTVTFCPGGRLCAAGLSDGQVIFYYSDGLRYFTQMECRNRHG 252
BLAST of mRNA_E-fasciculatus_F_contig108.639.1 vs. uniprot
Match: X0A5H3_FUSOX (Uncharacterized protein n=6 Tax=Fusarium TaxID=5506 RepID=X0A5H3_FUSOX) HSP 1 Score: 59.3 bits (142), Expect = 1.860e-5 Identity = 36/115 (31.30%), Postives = 53/115 (46.09%), Query Frame = 2
Query: 734 AISLSPSGAFLATCGMDRRCCVFRVQKRRQTTALGEGSPNAAAADQGMSRQLNFSSVEGRLVDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGDECSAVYEH 1078
A SPSG +LA G DR +F+V + + N L S+ + +P R GH ++ L+W+ D LL+GS+D TVR WHP + C V++H
Sbjct: 74 AAEFSPSGRYLAVAGKDRSIKLFKVISTEEERLAQQKCENGTI--------LGSKSLSIPVFLSRPYREFNGHSAEILTLSWSKND-FLLSGSTDKTVRLWHPSQ-PTCLRVFQH 178
BLAST of mRNA_E-fasciculatus_F_contig108.639.1 vs. uniprot
Match: A0A1B8AJU3_FUSPO (Uncharacterized protein n=3 Tax=Fusarium sambucinum species complex TaxID=569360 RepID=A0A1B8AJU3_FUSPO) HSP 1 Score: 57.4 bits (137), Expect = 7.500e-5 Identity = 40/136 (29.41%), Postives = 62/136 (45.59%), Query Frame = 2
Query: 680 RNMSTTQLLPRLHPGG---VRAISLSPSGAFLATCGMDRRCCVFRVQKRRQTTALGEGSPNAAAADQGMSRQLNFSSVEGRLVDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGDECSAVYEH 1078
R++ T + ++ GG + A S SG +LA G DR VF+V + +A L S+ + QP R GH ++ L+W+ D LL+GS+D TVR WHP + C +++H
Sbjct: 54 RSVPQTAIGNKMSSGGDATIWAADFSLSGRYLAVAGKDRSIKVFKV--------IATEEERSAQQRYESQSSLASKSLLAPVFLSQPCREFKGHSAEILTLSWSKND-FLLSGSTDKTVRLWHPSQ-PTCIRIFQH 179 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig108.639.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig108.639.1 >prot_E-fasciculatus_F_contig108.639.1 ID=prot_E-fasciculatus_F_contig108.639.1|Name=mRNA_E-fasciculatus_F_contig108.639.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=365bp MPPLPAKKSPWTSDAAASNLARQPPAVSPRAVSSLKPDTGDGATFESYLSback to top mRNA from alignment at E-fasciculatus_F_contig108:1497..3730+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig108.639.1 ID=mRNA_E-fasciculatus_F_contig108.639.1|Name=mRNA_E-fasciculatus_F_contig108.639.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2234bp|location=Sequence derived from alignment at E-fasciculatus_F_contig108:1497..3730+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig108:1497..3730+ >mRNA_E-fasciculatus_F_contig108.639.1 ID=mRNA_E-fasciculatus_F_contig108.639.1|Name=mRNA_E-fasciculatus_F_contig108.639.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2190bp|location=Sequence derived from alignment at E-fasciculatus_F_contig108:1497..3730+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |