prot_E-fasciculatus_F_contig10706.563.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10706.563.1
Unique Nameprot_E-fasciculatus_F_contig10706.563.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length612
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10706.563.1 vs. uniprot
Match: D7FQ02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ02_ECTSI)

HSP 1 Score: 533 bits (1373), Expect = 3.570e-175
Identity = 334/421 (79.33%), Postives = 346/421 (82.19%), Query Frame = 0 
Query:  194 QTRRGGTPGFRDNRQGNSGGXXXXXXXXXXRAXXXXXXXXXXXXXXXXXGPGLSAAVSVGSVGGELRGGELERVRGRVADLGAAIETSQSKLLRELSQVQEDFFSSFGYATPLGASAATSAAINGGTTAPDLGGGIGVGSVDGFSSALSSIPPLA--GXXXXXXXXSHGHVGGNNFDRSRSPRWGGRXXXXXXXXXRVATSISPRARPPLLRRDLDETAEEEEEDKVRARSSGSYHCVGTKTSRGRSGGRDRRDQXXXXXXXXTVDGTSYAFPMEASSSSPREGSGGVVGRGGERVFYSSSAGPAPRMRRSWKSLSPSPRTAAA-AKGGWPVAAGAVGSARRSYVQNAGVDELRDRLLAELEAKEELARELEDSRREXXXYXXXXXXXXXKVEELLEREADERRARGEAEAELEHLRASHR 611
            +T+ GGTPGFRDNR+GN   XXXXXXXXXX  XXXX             GPGLSA VSVGSV GELRGGELERVRGRVADLGAAIETSQSKLLRELSQVQEDFFSSFGYATPLGASAATSAAINGGTTAPDLGGGIGVGSVDGFSSALSSIPP A  GXXXXXX  SHG+VGGN FDRSRSPRWGGR         RVATS+SPRARPPLLRRDLDETAEEEEE K  ARSSGSYH  GTK SRGR+GGRDRRD         TVDG SYAFPMEA SSSPR+G G   GRGG+R F SSSAGPAPRMRRSWKSLSPSPRTAAA AKGGWPVAAGA+GSARRSY+QNAGVDELRDRLLAELEAKEELARELEDSRRE   +         +VE LLEREADERRARGEAEAELE LR SHR
Sbjct:    8 RTQGGGTPGFRDNREGNXXXXXXXXXXXXXXXXXXXLSGGRGEEEGERDGPGLSARVSVGSVAGELRGGELERVRGRVADLGAAIETSQSKLLRELSQVQEDFFSSFGYATPLGASAATSAAINGGTTAPDLGGGIGVGSVDGFSSALSSIPPFASGGXXXXXXAGSHGYVGGNTFDRSRSPRWGGRRAGSGGGSGRVATSVSPRARPPLLRRDLDETAEEEEEYKAEARSSGSYHRGGTKISRGRTGGRDRRDGATAAAAAATVDGASYAFPMEALSSSPRQG-GRSAGRGGDRPFSSSSAGPAPRMRRSWKSLSPSPRTAAAPAKGGWPVAAGALGSARRSYIQNAGVDELRDRLLAELEAKEELARELEDSRREAEEHQERGEQREGEVEGLLEREADERRARGEAEAELEQLRVSHR 427
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10706.563.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQ02_ECTSI3.570e-17579.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 403..423
NoneNo IPR availableCOILSCoilCoilcoord: 540..602
NoneNo IPR availableCOILSCoilCoilcoord: 25..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10706contigE-fasciculatus_F_contig10706:1136..4537 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10706.563.1mRNA_E-fasciculatus_F_contig10706.563.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10706 836..4537 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10706.563.1 ID=prot_E-fasciculatus_F_contig10706.563.1|Name=mRNA_E-fasciculatus_F_contig10706.563.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=612bp
MTGGDEGGSSALGALSRNWRSALVVNGLFDALEETERQRDELAHNLSRRD
QGPPLFDAATENITVDGGNGDAWLPPDRDRDSSGGEWEPRKRQPPLLRHS
LLGSSASPRSKSPPPRPPNPAIASATRTGRREEGNGGSGRRVLTSRESDK
RQHPTRRRPEARNGSDDDDDDDDDGLLYDTAAGAEQMPPPPPTQTRRGGT
PGFRDNRQGNSGGGGGGHAASSSRARGRARSGGRGEEERERDGPGLSAAV
SVGSVGGELRGGELERVRGRVADLGAAIETSQSKLLRELSQVQEDFFSSF
GYATPLGASAATSAAINGGTTAPDLGGGIGVGSVDGFSSALSSIPPLAGG
GGGGGGGSHGHVGGNNFDRSRSPRWGGRRAGSGGGSGRVATSISPRARPP
LLRRDLDETAEEEEEDKVRARSSGSYHCVGTKTSRGRSGGRDRRDQAAAA
AAAATVDGTSYAFPMEASSSSPREGSGGVVGRGGERVFYSSSAGPAPRMR
RSWKSLSPSPRTAAAAKGGWPVAAGAVGSARRSYVQNAGVDELRDRLLAE
LEAKEELARELEDSRREAEEYHERGEKREEKVEELLEREADERRARGEAE
AELEHLRASHR*
back to top