mRNA_E-fasciculatus_F_contig1070.561.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1070.561.1 vs. uniprot
Match: D7FIJ0_ECTSI (Dynactin 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ0_ECTSI) HSP 1 Score: 364 bits (935), Expect = 1.160e-126 Identity = 180/186 (96.77%), Postives = 181/186 (97.31%), Query Frame = 1
Query: 124 MAGSAQEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRQAGVQESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVRTEDAVNFYETFEPSAVVTPK 681
MAGSAQEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYR +ESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSV TEDAVNFYETFEPSAVVTPK
Sbjct: 1 MAGSAQEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYR-IEQEESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVWTEDAVNFYETFEPSAVVTPK 185
BLAST of mRNA_E-fasciculatus_F_contig1070.561.1 vs. uniprot
Match: A0A7S3QBQ9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBQ9_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.270e-42 Identity = 75/199 (37.69%), Postives = 114/199 (57.29%), Query Frame = 1
Query: 103 DIGRMTAMAGSAQEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRQAGV-------------QESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVS--VLHESTPSVRTEDAVNFYETF 654
D R+ +E YVKT + V +KA +HG N+ + G+SI+ P V IRG+ Q +RIGRYC +GEG+++RP QA + +E +F PL VGSHT IGK CV+E+A +G +V I D CV+ + ++D C++ GTV+ + V+PPF+ + GCP M+ ++ ES + +D V + F
Sbjct: 32 DPSRLVVEVAPEEEGYVKTAAYNYVSRKAFIHGAKNVEMKGKSIVHPKVHIRGDFQTVRIGRYCHIGEGSILRPPSYQASLDTSHEGASENGENEEEKQLIKFLPLIVGSHTQIGKGCVIEAAAVGSSVYIGDNCVISKRVIIKDCCYIASGTVIAQDTVIPPFSRVAGCPGGMIENGLMAESITTTSVDDCVEQFNEF 230
BLAST of mRNA_E-fasciculatus_F_contig1070.561.1 vs. uniprot
Match: A0A7S2V2Q0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Q0_9STRA) HSP 1 Score: 144 bits (363), Expect = 6.800e-40 Identity = 73/176 (41.48%), Postives = 112/176 (63.64%), Query Frame = 1
Query: 139 QEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRQAGVQESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVRTEDAVNFYETFEPSA 666
+EE+++T ++V KK + + + + G++I+M GVIIRG+L ++ +GRYC VG T+IRPA + + E F + +G +T IG+ C++E+A IG NV+ VLG+ S VRD C L GTVL GAVVPPF+V+ GCP R+ S L E++P + A + Y+ F+ +A
Sbjct: 9 KEEFIRTTTNNLVSKKVRISSPNFVKITGKTILMHGVIIRGDLAKVEMGRYCEVGANTIIRPALK---ISEEPT---FADVKIGDNTRIGEDCIIEAAWIGTNVQXXXXXVLGKGSLVRDCCRLEDGTVLAPGAVVPPFSVVAGCPGRVTSELPENSPEEFSHAAQDSYKKFKETA 178
BLAST of mRNA_E-fasciculatus_F_contig1070.561.1 vs. uniprot
Match: A0A7S1ZJQ9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJQ9_TRICV) HSP 1 Score: 144 bits (364), Expect = 8.650e-40 Identity = 70/174 (40.23%), Postives = 111/174 (63.79%), Query Frame = 1
Query: 136 AQEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGEL-QEIRIGRYCVVGEGTVIRPAYRQAGVQESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVRTEDAVNFYETF 654
A+E Y+KT + V + A +HG ++ + G+S++ PG ++RG+L +R+GRYC VG+ +V+RP A + + R P S+G+HT IG+ CVVE+A +G +V + DGCVLG+ S ++D C + PGTVL AVVPPF+++ G P R+V + ES + + ++ Y F
Sbjct: 17 AEEGYIKTAANNYVSRSASIHGSRHVEIRGKSVVRPGAVVRGDLGAPVRVGRYCRVGDRSVLRPP--SASLPDGTE--RRLPQSIGNHTSIGRDCVVEAAAVGFSVLVGDGCVLGKRSVIKDCCRIEPGTVLAPDAVVPPFSIVSGSPGRVVGEMPESAAAEIPDRSLGEYAAF 186
BLAST of mRNA_E-fasciculatus_F_contig1070.561.1 vs. uniprot
Match: A0A0L0DIQ2_THETB (Dynactin subunit 5 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DIQ2_THETB) HSP 1 Score: 140 bits (353), Expect = 2.440e-38 Identity = 68/174 (39.08%), Postives = 108/174 (62.07%), Query Frame = 1
Query: 142 EEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRQAGVQESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVRTEDAVNFYETFEPS 663
EE+++T G+ V + + + G N+ L G+S+++PG IIRG+L +RIGRYCV+ + V+RPAY+ + LS+G Y+GK VVE+A IG +V I +G ++ + + + D C +LPG V+PE AV+PPF++ G PA ++ L E+ V E A YE++ P+
Sbjct: 9 EEWIETASGNKVSRASVLCGSQNIILNGKSLVLPGSIIRGDLAAVRIGRYCVISDRVVLRPAYKALPKG-----LNYFQLSLGDCVYVGKDAVVEAASIGSHVIIGEGAIVSKRAVILDCCEILPGAVVPEDAVIPPFSIYGGNPAVLIGELTEAAQRVHEEKAFACYESYVPA 177
BLAST of mRNA_E-fasciculatus_F_contig1070.561.1 vs. uniprot
Match: A0A0N4UAM7_DRAME (Uncharacterized protein n=1 Tax=Dracunculus medinensis TaxID=318479 RepID=A0A0N4UAM7_DRAME) HSP 1 Score: 139 bits (351), Expect = 5.640e-38 Identity = 65/172 (37.79%), Postives = 107/172 (62.21%), Query Frame = 1
Query: 139 QEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRQAGVQESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVRTEDAVNFYETF 654
++E+V+T G+ V KK+ + G N+ L G+SI+M I+RG++ IR G+YCVVGE TVIRP+Y++ + F P+ +G H +I C++ +A IG V I G ++GR+ ++D +LP +P AV+PPF+++ G P ++ L EST ++ T+ +FY+ F
Sbjct: 10 KQEFVETATGNKVNKKSRLFGSQNIVLNGKSILMKDCILRGDMNSIRAGKYCVVGERTVIRPSYKRF-----SKGLTFFPVHIGDHVFIENDCIIMAAQIGAFVHIGSGAIVGRSVIIKDCVQVLPNAFVPHDAVIPPFSIVSGNPGTIIGELPESTQNLMTQATRSFYDNF 176
BLAST of mRNA_E-fasciculatus_F_contig1070.561.1 vs. uniprot
Match: A0A3S1H5M8_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1H5M8_ELYCH) HSP 1 Score: 135 bits (339), Expect = 3.190e-36 Identity = 63/172 (36.63%), Postives = 104/172 (60.47%), Query Frame = 1
Query: 145 EYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRQAGVQESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVRTEDAVNFYETFEP 660
+Y++T G+ V +++ + G N+ + G++I+M G +IRG+L +RIGR+C++ VIRPA+++ + F PL +G H I ++ VV +A +G V I CV+GR + ++D C + T+LP AVVPPFT+ G P ++ S L + T + T+ VN+Y F P
Sbjct: 12 QYIETASGNKVSRQSVLCGSQNIVINGKTIVMTGCVIRGDLANVRIGRHCIISNNAVIRPAFKRFSKGVA-----FFPLHIGDHVLIEENSVVNAAQVGSFVHIGKNCVIGRRAVLKDCCAIADNTILPPEAVVPPFTLCSGSPGKLTSELPDCTQDLMTDITVNYYHHFRP 178
BLAST of mRNA_E-fasciculatus_F_contig1070.561.1 vs. uniprot
Match: A0A0K0JQM9_BRUMA (BMA-DNC-5 n=14 Tax=Spiruromorpha TaxID=2072716 RepID=A0A0K0JQM9_BRUMA) HSP 1 Score: 133 bits (334), Expect = 1.790e-35 Identity = 65/176 (36.93%), Postives = 102/176 (57.95%), Query Frame = 1
Query: 139 QEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRQAGVQESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVRTEDAVNFYETFEPSA 666
+ EYV+T G+ V +K+ + G N+ L G+S +M I+RG++ IR GRYCVVGE T+IRP+Y++ + F P+ +G H +IG C+V +A IG V + ++ +LP TV+P AV+PPF+++ G P ++ L EST + T+ NFY+ F P +
Sbjct: 6 KSEYVETATGNKVNRKSRLFGSQNIVLNGKSTLMKDCILRGDMHNIRTGRYCVVGERTIIRPSYKRF-----SKGLTFFPVHIGDHVFIGNDCIVMAAEIGAFVHXXXXXXXXXSVIIKSCVQVLPNTVVPHDAVIPPFSIVGGNPGTVIGHLPESTQELMTQATRNFYDNFVPDS 176
BLAST of mRNA_E-fasciculatus_F_contig1070.561.1 vs. uniprot
Match: A0A0N4UWP5_ENTVE (Uncharacterized protein n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4UWP5_ENTVE) HSP 1 Score: 129 bits (325), Expect = 4.120e-34 Identity = 65/172 (37.79%), Postives = 106/172 (61.63%), Query Frame = 1
Query: 151 VKTRDGDIVFKKA-HVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRQAGVQESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVRTEDAVNFYETFEPS 663
V+T G+ V ++ H+ G N+ L G+SIIM G I+RG+L +RIG+YCV+GE ++IRP+++ + + P+ +G + +I CVV +A IG V I ++GR++ ++D +LP V+P+ AV+PPF+++ G PA +V L ST + + +FYE F PS
Sbjct: 14 VETATGNKVSRRGTHLFGSTNIVLSGKSIIMDGCILRGDLNSVRIGKYCVIGERSIIRPSFKAF-----SKGLTYFPVHIGDYVFIENDCVVMAAQIGSFVHIGSNAIIGRSTVLKDCVQILPDAVIPQDAVIPPFSIVGGNPAVIVGELPPSTQDLMMQANKSFYENFVPS 180
BLAST of mRNA_E-fasciculatus_F_contig1070.561.1 vs. uniprot
Match: A0A0D6ELH2_SPOSA (SPOSA6832_02372-mRNA-1:cds n=1 Tax=Sporidiobolus salmonicolor TaxID=5005 RepID=A0A0D6ELH2_SPOSA) HSP 1 Score: 129 bits (325), Expect = 5.460e-34 Identity = 72/196 (36.73%), Postives = 106/196 (54.08%), Query Frame = 1
Query: 118 TAMAGSAQEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQE--------------IRIGRYCVVGEGTVIRPAYRQ-AGVQESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVRTEDAVNFYETFEP 660
TA + S++ Y+ T G+IV + + + G N+ L G+SI+ PG IIRG+L+ + +G+YCVVGEGTV+RP Y+ GV + P+ +G + IG VVE+A IG V I GC++G + ++D + G V+ G +VP T G PAR + L ESTP + A FY F+P
Sbjct: 4 TAPSASSKSSYIHTDTGNIVSRASTITGSQNIVLGGKSILQPGCIIRGDLRRSGATSAGXXXXXVVVAMGKYCVVGEGTVLRPCYKTYKGVFS------YYPMKIGDYVSIGPGSVVEAASIGTGVEIGKGCIVGPLAILKDYSRIADGAVVGAGTIVPSLTEWSGSPARPTAQLPESTPELVEAKAKAFYSRFQP 193 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1070.561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1070.561.1 >prot_E-fasciculatus_F_contig1070.561.1 ID=prot_E-fasciculatus_F_contig1070.561.1|Name=mRNA_E-fasciculatus_F_contig1070.561.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=190bp MTAMAGSAQEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGEback to top mRNA from alignment at E-fasciculatus_F_contig1070:15349..18483- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1070.561.1 ID=mRNA_E-fasciculatus_F_contig1070.561.1|Name=mRNA_E-fasciculatus_F_contig1070.561.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3135bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1070:15349..18483- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1070:15349..18483- >mRNA_E-fasciculatus_F_contig1070.561.1 ID=mRNA_E-fasciculatus_F_contig1070.561.1|Name=mRNA_E-fasciculatus_F_contig1070.561.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1140bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1070:15349..18483- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |