mRNA_E-fasciculatus_F_contig10699.552.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10699.552.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 112 bits (279), Expect = 1.950e-26 Identity = 61/98 (62.24%), Postives = 79/98 (80.61%), Query Frame = 1
Query: 1 MEEPIYLVDGTALHVTG--AAGSIDGGWSTRLFTVVNATLHLTGLNVTSGASAAGGGIAAAGSVLTLNRTNFVGNRASGHGGAVYASNGSRVSCTGGG 288
+E Y+VDGT L +TG ++ +IDG +TRLFTVVNATLHLTG++VTSGAS GG IAAAG+ LTLN+TNF+ N A+G+GGA+Y S+GS + C+GGG
Sbjct: 184 VESVFYVVDGTTLSITGDGSSAAIDGNAATRLFTVVNATLHLTGVDVTSGASTTGGAIAAAGATLTLNQTNFLRNTATGNGGAIYLSDGSSMVCSGGG 281
BLAST of mRNA_E-fasciculatus_F_contig10699.552.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI) HSP 1 Score: 108 bits (269), Expect = 4.330e-25 Identity = 63/97 (64.95%), Postives = 76/97 (78.35%), Query Frame = 1
Query: 1 MEEPIYLVDGTALHVTGAAGS--IDGGWSTRLFTVVNATLHLTGLNVTSGAS-AAGGGIAAAGSVLTLNRTNFVGNRASGHGGAVYASNGSRVSCTG 282
+E PIY+ DGT + VTG + IDG +TRLFTVV+A+LHL +N++ GAS A GGGIAAAGS +TLN T+ VGNRA+GHGGAVYASNGS VSC G
Sbjct: 79 VESPIYVRDGTIVTVTGVGSTAVIDGHAATRLFTVVDASLHLRNVNISYGASRAVGGGIAAAGSRVTLNHTSIVGNRATGHGGAVYASNGSTVSCLG 175
BLAST of mRNA_E-fasciculatus_F_contig10699.552.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 107 bits (268), Expect = 5.970e-25 Identity = 58/95 (61.05%), Postives = 74/95 (77.89%), Query Frame = 1
Query: 1 MEEPIYLVDGTALHVTGAAGS---IDGGWSTRLFTVVNATLHLTGLNVTSGASAAGGGIAAAGSVLTLNRTNFVGNRASGHGGAVYASNGSRVSC 276
+ E I++ DGT L +TGAAGS +DG TRLFTVVNA LH++G+N++ GAS +GG IAA GS LT N+TNF+GN ASG+GGAV+ S+GS VSC
Sbjct: 257 VNETIFVTDGTVLTITGAAGSNAALDGNSVTRLFTVVNAALHVSGINLSHGASISGGAIAAGGSTLTFNQTNFIGNVASGNGGAVFVSDGSLVSC 351
BLAST of mRNA_E-fasciculatus_F_contig10699.552.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 100 bits (249), Expect = 2.200e-22 Identity = 61/103 (59.22%), Postives = 73/103 (70.87%), Query Frame = 1
Query: 7 EPIYLVDGTALHVTG--AAGSIDGGWSTRLFTVVNATLHLTGLNVTSGASAAGGGIAAAGSVLTLNRTNFVGNRASGHGGAVYASNGSRVSCTGGGGGTFADN 309
+PIY+ GT L +TG A+ IDG TRLFTV NA LHL+ LN+++GAS GG IAAA S LT N TNFVGN+A+ +GG VY +GS VSC GGG T ADN
Sbjct: 321 DPIYIGGGTVLTITGDGASSVIDGNTLTRLFTVNNAVLHLSNLNISNGASIVGGAIAAANSSLTFNGTNFVGNQATRYGGGVYVIDGSDVSCVGGG--TLADN 421
BLAST of mRNA_E-fasciculatus_F_contig10699.552.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 96.7 bits (239), Expect = 4.870e-21 Identity = 54/92 (58.70%), Postives = 69/92 (75.00%), Query Frame = 1
Query: 7 EPIYLVDGTALHVTGAAGS--IDGGWSTRLFTVVNATLHLTGLNVTSGASAAGGGIAAAGSVLTLNRTNFVGNRASGHGGAVYASNGSRVSC 276
+P Y+VDGT L ++GA S ++G STR+FTVVNA L+L+ +NV+ G+S GG IAAA S LTLN TNFVGN AS +GGA+Y S+GS V C
Sbjct: 175 QPFYVVDGTVLTISGADSSAVVEGNASTRIFTVVNADLYLSHVNVSYGSSTTGGAIAAARSSLTLNGTNFVGNTASAYGGAIYVSDGSSVYC 266
BLAST of mRNA_E-fasciculatus_F_contig10699.552.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 9.090e-21 Identity = 55/92 (59.78%), Postives = 69/92 (75.00%), Query Frame = 1
Query: 7 EPIYLVDGTALHVTGAAGS--IDGGWSTRLFTVVNATLHLTGLNVTSGASAAGGGIAAAGSVLTLNRTNFVGNRASGHGGAVYASNGSRVSC 276
EP +VDGT L V+GA S ++G STR+FTVVNA L+L+G+NV+ G+S GG IAAA S LTLN T+FVGN AS +GGA+Y S+GS V C
Sbjct: 234 EPFNVVDGTVLTVSGADSSAVVEGNASTRIFTVVNANLYLSGVNVSYGSSTVGGAIAAARSSLTLNGTSFVGNAASSYGGAIYLSDGSSVYC 325
BLAST of mRNA_E-fasciculatus_F_contig10699.552.1 vs. uniprot
Match: A0A6H5L3Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y9_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 7.530e-20 Identity = 55/105 (52.38%), Postives = 72/105 (68.57%), Query Frame = 1
Query: 1 MEEPIYLVDGTALHVTGAAGS--IDGGWSTRLFTVVNATLHLTGLNVTSGASAAGGGIAAAGSVLTLNRTNFVGNRASGHGGAVYASNGSRVSCTGGGGGTFADN 309
+ + +++VDGT L V GA + I+G TRLFTVVNA LH++G+N++ GAS AG IAAAGS T +R NFV + A+ GG V+ S+GS SC G G TFADN
Sbjct: 3 VNDSVFVVDGTVLTVAGADSNAVINGNAGTRLFTVVNAALHVSGVNISLGASVAGEAIAAAGSTQTFDRANFVRHGATALGGVVFVSDGSNASCVGAG--TFADN 105
BLAST of mRNA_E-fasciculatus_F_contig10699.552.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 8.460e-18 Identity = 48/79 (60.76%), Postives = 63/79 (79.75%), Query Frame = 1
Query: 43 VTGAAGSIDGGWSTRLFTVVNATLHLTGLNVTSGASAAGGGIAAAG-SVLTLNRTNFVGNRASGHGGAVYASNGSRVSC 276
V G+ ++DG +TRLFTVV+A+LH+ G+N++ GAS +GG IAA G S LT N+TNF+GN ASG+GGAVY S+GS VSC
Sbjct: 22 VRGSNAALDGNSATRLFTVVDASLHVRGVNISHGASISGGAIAAGGGSTLTFNKTNFIGNVASGNGGAVYVSDGSFVSC 100
BLAST of mRNA_E-fasciculatus_F_contig10699.552.1 vs. uniprot
Match: A0A6H5KRU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU8_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 1.430e-15 Identity = 56/122 (45.90%), Postives = 74/122 (60.66%), Query Frame = 1
Query: 19 LVDGTALHVTGAAGS--IDGGWSTRLFTVVNATLHLTGLNVTSGASAAGGGIAAAGSVLTLNRTNFVGN----------------RASGHGGAVYASNGSRVSCTGGGGGTFADNGAGSDGG 330
+VDGTA+ ++G + IDG STRLF VVN +LH +N++SGAS GG +AAAGS L N TNFVGN RA+ HG A++A+ S VSC GG++ +N AG+ GG
Sbjct: 46 IVDGTAITMSGEGSTAVIDGNGSTRLFIVVNTSLHFNHVNISSGASGVGGAVAAAGSSLAFNGTNFVGNKSSYVSCVGGGVFADNRAAMHGEALFATGTSEVSC----GGSWLNNTAGNSGG 163
BLAST of mRNA_E-fasciculatus_F_contig10699.552.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 5.720e-15 Identity = 44/86 (51.16%), Postives = 62/86 (72.09%), Query Frame = 1
Query: 1 MEEPIYLVDGTALHVTG---AAGSIDGGWSTRLFTVVNATLHLTGLNVTSGASAAGGGIAAAGSVLTLNRTNFVGNRASGHGGAVY 249
++ PI++V GT L+VTG A+ IDG +TRLF+V NATL L+G+ + SG+SA GG IAA+G+ L N T+FV N A +GGA++
Sbjct: 164 LDAPIFIVHGTDLNVTGGGEASAVIDGNGTTRLFSVDNATLRLSGVELRSGSSAIGGAIAASGATLAFNNTSFVNNSAGSNGGALW 249 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10699.552.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10699.552.1 >prot_E-fasciculatus_F_contig10699.552.1 ID=prot_E-fasciculatus_F_contig10699.552.1|Name=mRNA_E-fasciculatus_F_contig10699.552.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=110bp MEEPIYLVDGTALHVTGAAGSIDGGWSTRLFTVVNATLHLTGLNVTSGASback to top mRNA from alignment at E-fasciculatus_F_contig10699:316..645+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10699.552.1 ID=mRNA_E-fasciculatus_F_contig10699.552.1|Name=mRNA_E-fasciculatus_F_contig10699.552.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=330bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10699:316..645+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10699:316..645+ >mRNA_E-fasciculatus_F_contig10699.552.1 ID=mRNA_E-fasciculatus_F_contig10699.552.1|Name=mRNA_E-fasciculatus_F_contig10699.552.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=660bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10699:316..645+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |