mRNA_E-fasciculatus_F_contig10040.55.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10040.55.1
Unique NamemRNA_E-fasciculatus_F_contig10040.55.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig10040.55.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE)

HSP 1 Score: 298 bits (762), Expect = 3.180e-89
Identity = 251/402 (62.44%), Postives = 291/402 (72.39%), Query Frame = 1
Query:    1 GPSPTSCLNALIIALDETCDGKSWYTSTKDLQLASMEFCIACRNYPTLHLTVDAQTPRRLLAAVDAPPSHAKRLCRTRVPLLRARKVTWNTPTAVELRFPMFAMTTVDYLCFGRAFEGSLEGVEWPQRLKTLEFDTSSQFNECIDLAKLPVSLQRLAFGQMFNQSIESVAFLGSLQQLVFGKYSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAFGVPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLCEDEGHNVMSMHSDFNQRIGSSIWPASLRRLTLGGRFRQSLQGLGTWMPNLETLCLLD-HGVGSGGDSLLCGIEWPKRLRQLTVFQESNPNGVLVPSSVEVFCRYN 1203
            GP+   CL ALI+AL+ETCDGKSWYTSTK+LQLAS++FCIACRN  T+HL VD Q PRRLLA+ DAPP H KRLC TRVP LR+R+VTWN PTA +LR P+FAMT ++YL FG AF  SLE V WP+ L+T+EF   S F++ I+L + P  LQ + FG  FNQ IE V F  SLQQL+F + S   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  FG                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG C++   N M + ++F+Q IGSS+ PA LRRL LG  FRQSLQGLGTWMPNLE L LL  HG G G  + L  IEWPK LR LT+ + ++ +GV +P +V+V   YN
Sbjct:   45 GPTRKFCLEALIVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTMEFHHDSPFDQTIELVQWPPFLQNVTFGGDFNQPIERVKFPASLQQLIF-RTSSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFG----------------------NRLNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWCDEFAGNGMVIFANFDQPIGSSVGPALLRRLVLGHMFRQSLQGLGTWMPNLEVLHLLHYHGSGLGDSNFLREIEWPKGLRHLTLLEGTSIDGVDIPLAVQVLFAYN 423          
BLAST of mRNA_E-fasciculatus_F_contig10040.55.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 1.630e-70
Identity = 214/396 (54.04%), Postives = 255/396 (64.39%), Query Frame = 1
Query:    1 GPSPTSCLNALIIALDETCDGKSWYTSTKDLQLASMEFCIACRNYPTLHLTVDAQTPRRLLAAVDAPPSHAKRLCRTRVPLLRARKVTWNTPTAVELRFPMFAMTTVDYLCFGRAFEGSLEGVEWPQRLKTLEFDTSSQFNECIDLAKLPVSLQRLAFGQMFNQSIESVAFLGSLQQLVFGKYSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAFGVPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLCEDEGHNVMSMHSDFNQRIGSSIWPASLRRLTLGGRFRQSLQGLGTWMPNLETLCLLDHGVGSGG-DSLLCGIEWPKRLRQLTVFQESNPNGVLVPSSVE 1185
            GP+  SCLNA+I+AL+ET DGKSWYTSTK+ QLAS+EFCIACRN+ TL L VD++TPRRLLAA DAPP H KRLC TRVP LRAR+VTW+ PTA  LR  +++M   D L F RAFE SLE V WP+RLKT+E    ++  +  D +             +F+Q I  V +  +L+QL FG +                                                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     G+ ++   +V+ + S FN+ IG+S WP ++ RLTLG  FRQSLQ LGTWMPNLET  LL H   SG  DS L GIEWPK LRQL V + S+  GV++PS+VE
Sbjct:    6 GPARDSCLNAIIVALNETSDGKSWYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPPHPKRLCGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFVRAFEDSLEAVAWPRRLKTVEVSGIAEVAKFHDKS-------------LFDQPIAGVVWPDTLEQLTFGLF------------------------------------------------LNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVCFGVRQEVLGDVV-VTSKFNRXIGASAWPKAMHRLTLGQNFRQSLQELGTWMPNLETFHLLHHIHDSGTEDSFLRGIEWPKGLRQLAVCRLSSLAGVVIPSTVE 339          
BLAST of mRNA_E-fasciculatus_F_contig10040.55.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 1.670e-61
Identity = 253/460 (55.00%), Postives = 285/460 (61.96%), Query Frame = 1
Query:   31 LIIALDETCDGKSWYTSTKDLQLASMEFCIACRNYPTLHLTVDAQTPRRLLAAVDAPPSHAKRLCRTRVPLLRARKVTWNTPTAVELRFPMFAMTTVDYLCFGRAFEGSLEGVEWPQRLKTLEFDTSSQFNECIDLAKLPVSLQRLAFGQMFNQSIESVAFLGSLQQLVFGKYSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAFGVPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG------LCEDEGHNVMSMHSDFNQRIGSSIWPASLRRLTLGGRFRQSLQGLGTWMPNLETLCLLDHGVGSGGDSLLCGIEWPKRLRQLTVFQESNPNGVLVPSSVEVFCRYNGSYS*LL*PGGDLMVQIGATILRSTWCTICSIFYRAERMDTQVEKLGARLSS-----RGIGAA 1377
            LI+AL+E CDGK WYTSTK+LQLAS+EFC+ACR Y  L L VDAQTPR LLAAVDAPP H KR CRTRVP LRAR+V WN PTA ELR  MFA+  V+ L FG  F GSLE V WP  LK + F  SS+FN+         SLQ+L                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        X       XXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       + + EG     M S FNQR+    WP S+RRLTLG +F++SLQGLGT MPNLE   LLDH  GSG +  L GIEWPK LR L VF  S+ +GV++P +    CR   S          L       + RS W  +    +   R+ T V  L  R+SS     RG+G+A
Sbjct:   21 LILALNEMCDGKRWYTSTKELQLASLEFCLACRKYQILELKVDAQTPRNLLAAVDAPPPHTKRPCRTRVPRLRARRVKWNMPTATELRTLMFALKDVNCLRFGGVFNGSLEAVVWPPPLKQIIF-FSSEFNQXXXXXXXXASLQKLDLENSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLKEDVEXXXXXXXXXXXXXXXXXXEWATFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMHDGEGFENAVMLSAFNQRVDMCEWPVSMRRLTLGHKFKESLQGLGTRMPNLEAFHLLDHRNGSGSEDSLRGIEWPKVLRHLVVFSNSSLDGVVIPFN----CRGLAS----------LKRSPVVVMPRSLWVVLGEAVFAVTRLRTSVCVL-ERVSSVGKSIRGVGSA 464          
BLAST of mRNA_E-fasciculatus_F_contig10040.55.1 vs. uniprot
Match: A0A6H5JYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF0_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 7.710e-59
Identity = 246/399 (61.65%), Postives = 269/399 (67.42%), Query Frame = 1
Query:   55 CDGKSWYTSTKDLQLASMEFCIACRNYPTLHLTVDAQTPRRLLAAVDAPPSHAKRLCRTRVPLLRARKVTWNTPTAVELRFPMFAMTTVDYLCFGRAFEGSLEGVEWPQRLKTLEFDTSSQFNECIDLAKLPVSLQRLAFGQMFNQSIESVAFLGSLQQLVFGKYSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLA--------------------FGVPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLCEDEGHNVMSMHSDFNQRIGSSIWPASLRRLTLGGRFRQSLQGLGTWMPNLETLCLLDHGVGSGG-DSLLCGIEWPKRLRQLTVFQESNPNGVLVPSSVEV 1188
            CDGK WYTSTK+LQ AS+EFCIACR Y TL L VD QTPR LLAAVDAP  H+KR CRTRVP LRAR+V WN PTA EL+ P+FA+  V  L FG AFEGSLE V WPQRLK ++F   S FN+ I+  + P SL  L                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                        G  FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   E +G +   M S+F               LTLG +FRQSLQGLGTW+PNLE    LDH  GSG  DSLL GIEWP  LRQL VF++S  +GV++PS+VEV
Sbjct:    2 CDGKRWYTSTKELQQASLEFCIACRKYQTLRLRVDVQTPRTLLAAVDAPSPHSKRPCRTRVPRLRARRVIWNMPTATELKSPIFALKDVVRLDFGPAFEGSLESVAWPQRLKEIDFSWGSLFNQPIEGVEFPPSLLELRLSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYRSRXXXXXXXXXXXXXXXXXXXGEAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHESQGFDHAIMFSEFXXXXXXXXXXXXXXXLTLGHKFRQSLQGLGTWIPNLEIFHFLDHSNGSGDEDSLLRGIEWPTGLRQLAVFRDSRLDGVIIPSTVEV 400          
BLAST of mRNA_E-fasciculatus_F_contig10040.55.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 1.040e-57
Identity = 104/166 (62.65%), Postives = 124/166 (74.70%), Query Frame = 1
Query:    1 GPSPTSCLNALIIALDETCDGKSWYTSTKDLQLASMEFCIACRNYPTLHLTVDAQTPRRLLAAVDAPPSHAKRLCRTRVPLLRARKVTWNTPTAVELRFPMFAMTTVDYLCFGRAFEGSLEGVEWPQRLKTLEFDTSSQFNECIDLAKLPVSLQRLAFGQMFNQSI 498
            GP+ +SCL  L +AL+ETCDGKSWYTSTK+LQLAS+E C+ACR+Y TLHLTVDA TPRRLLAA DAP  H KRLC TRVP LRAR+ TWN PTA  +R  +FA   VDYL FG+AF GSL+ + WP+RLKT+EF  SS  N  +D    P SL+++  G  FNQ I
Sbjct:  130 GPTRSSCLKTLTVALNETCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTIEFRQSSPLNRLLDGVSWPASLRKVCLGHDFNQPI 295          
BLAST of mRNA_E-fasciculatus_F_contig10040.55.1 vs. uniprot
Match: D7FH81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 2.040e-57
Identity = 102/162 (62.96%), Postives = 119/162 (73.46%), Query Frame = 1
Query:    1 GPSPTSCLNALIIALDETCDGKSWYTSTKDLQLASMEFCIACRNYPTLHLTVDAQTPRRLLAAVDAPPSHAKRLCRTRVPLLRARKVTWNTPTAVELRFPMFAMTTVDYLCFGRAFEGSLEGVEWPQRLKTLEFDTSSQFNECIDLAKLPVSLQRLAFGQMF 486
            G +   CL++LI+AL+ETCDG SWYTSTK+LQ AS+EFCIACRNYP +HL VD Q PR LLAA DAPP H KRLC TRVP LRAR VTWN   A EL  P+FA+T VD L FG  F+GSLE V WP+RLK +EF  +S FN+ ++L K P SLQ L  G  F
Sbjct:    8 GLTHNPCLSSLIVALNETCDGTSWYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPPPHPKRLCWTRVPRLRARSVTWNMRAAAELGNPIFAITDVDCLEFGGTFDGSLEAVTWPRRLKMIEFLYTSPFNQPLELIKWPESLQHLVLGGDF 169          
BLAST of mRNA_E-fasciculatus_F_contig10040.55.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 2.150e-53
Identity = 101/156 (64.74%), Postives = 118/156 (75.64%), Query Frame = 1
Query:    1 GPSPTSCLNALIIALDETCDGKSWYTSTKDLQLASMEFCIACRNYPTLHLTVDAQTPRRLLAAVDAPPSHAKRLCRTRVPLLRARKVTWNTPTAVELRFPMFAMTTVDYLCFGRAFEGSLEGVEWPQRLKTLEFDTSSQFNECIDLAKLPVSLQRL 468
            GP+  +CLNA+ +AL ET DGKSWYTSTK+LQLAS+EFC+ACR Y TLHL VD + PR LLAA D PP H KRL R RVP LRAR VTWN PTA ELR P+FA+  +D+L FG AFEGSLE V WP+RL+++ F   S FN  IDL K P SL+RL
Sbjct:   30 GPTSNTCLNAIYVALGETRDGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPPQHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPRRLESIAFHNFSPFNTPIDLVKWPASLKRL 185          
BLAST of mRNA_E-fasciculatus_F_contig10040.55.1 vs. uniprot
Match: D7G2S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S9_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 4.420e-49
Identity = 143/414 (34.54%), Postives = 178/414 (43.00%), Query Frame = 1
Query:    1 GPSPTSCLNALIIALDETCDGKSWYTSTKDLQLASMEFCIACRNYPTLHLTVDAQTPRRLLAAVDAPPSHAKRLCRTRVPLLRARKVTWNTPTAVELRFPMFAMTTVDYLCFGRAFEGSLEGVE-WPQRLKTLEFDTSSQFNECIDLAKLPVSLQRLAFGQMFNQSIESVAFLGSLQQLVFGKYSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAFGVPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLCEDEGHN-VMSMHSDFNQRIGSSIWPASLRRLTLGGRFRQSLQGLGTWMPNLETLCLLD-HGVGSGGDSLLCGIEWPKRLRQLTVFQESNPNGVLVPSSVEVF------CRYNGSYS 1215
            GPS +SCLNAL+IAL+ETC+G+SWYTSTK+LQLAS+EFC+ACRNY TLHL VDAQ PRRLLA  DAPP H + LCRTRVP LRAR+VTW    A EL  P+FAMT VD L FG   E SLE +  W  R                       S    + GQ   + + SVA +      +   Y                                                                                                                 C  +  N V+ +     Q   + ++ ++     LG  F+QSLQGLGTWMPNLE L L D      G DSLL GI WP  LRQL V++ +  +GV +PS+VEV       C ++G+ S
Sbjct:  107 GPSRSSCLNALVIALNETCNGESWYTSTKELQLASLEFCVACRNYQTLHLKVDAQIPRRLLARADAPPPHPELLCRTRVPRLRARRVTWGMRKAAELSIPIFAMTDVDCLKFG---ETSLEALRLWHGR--------DGWKRSSFSFLHYSTSRSVWSSGQHLCRRLNSVAVV------IARAYD-----------------------------------------------------------------------------------------------------------WICDRCRRKRDNDVLVLRPTHRQPWLAYVFAST----PLGDDFKQSLQGLGTWMPNLEVLRLFDFRDPDFGNDSLLLGIGWPTGLRQLAVYECTKMDGVTIPSTVEVLYKVVQTCSFDGARS 392          
BLAST of mRNA_E-fasciculatus_F_contig10040.55.1 vs. uniprot
Match: D7FUL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL5_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 2.620e-44
Identity = 96/181 (53.04%), Postives = 118/181 (65.19%), Query Frame = 1
Query:    1 GPSPTSCLNALIIALDETCDGKSWYTSTKDLQLASMEFCIACRNYPTLHLTVDAQTPRRLLAAVDAPPSHAKR-LCRTRVPLLRAR-KVTWNTPTAVELRFPMFAMTTVDYLCFGRAFEGSLEGVEWPQRLKTLEFDTSSQFNECIDLAKLPVSLQRLAFGQMFNQSIESVAFLGSLQQLV 537
            GP  +SCLNA+++AL ETCDGKSWYTSTK+LQLAS+ FC ACRN+ T+HL VD   PRRLLAA DAPP  ++  +  TR P   A   V     + +E    +FAMT VD+L FG  FEG+LE V WP+ LKT++    S F + IDL + P SLQ L FG  F Q I  V    SLQQL+
Sbjct:  130 GPGRSSCLNAIVVALSETCDGKSWYTSTKELQLASLGFCTACRNHQTVHLKVDEHIPRRLLAAADAPPPASEAAVSDTRAPTHSASCDVEHADSSGIEEPCTVFAMTDVDHLEFGWDFEGNLEAVAWPRWLKTIDLHPWSNFGKPIDLIEWPDSLQTLEFGWEFYQPIYRVNVPASLQQLI 310          
BLAST of mRNA_E-fasciculatus_F_contig10040.55.1 vs. uniprot
Match: D8LCG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCG0_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 8.050e-31
Identity = 66/99 (66.67%), Postives = 74/99 (74.75%), Query Frame = 1
Query:  913 MSMHSDFNQRIGSSIWPASLRRLTLGGRFRQSLQGLGTWMPNLETLCLLDHGVGSGGDSLLCGIEWPKRLRQLTVFQESNPNGVLVPSSVEVFCRYNGS 1209
            M M S+FNQRIG S WP SLRRLTLG +FRQSLQGLGTWMPNLE+L LL+  V    DSLL  IEWPK L QLTVF+ES+   V +P+ VEV  RYN S
Sbjct:    1 MIMRSEFNQRIGRSAWPPSLRRLTLGHKFRQSLQGLGTWMPNLESLRLLEWYVDLQNDSLLRRIEWPKGLLQLTVFKESSLEDVGIPAPVEVLHRYNES 99          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10040.55.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRF9_9PHAE3.180e-8962.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUA5_9PHAE1.630e-7054.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRK5_9PHAE1.670e-6155.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYF0_9PHAE7.710e-5961.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPY7_9PHAE1.040e-5762.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH81_ECTSI2.040e-5762.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZZ4_9PHAE2.150e-5364.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2S9_ECTSI4.420e-4934.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FUL5_ECTSI2.620e-4453.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCG0_ECTSI8.050e-3166.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10040contigE-fasciculatus_F_contig10040:942..3424 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-26_004870.2
Exons1
Model size2483
Cds size1113
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10040.55.1prot_E-fasciculatus_F_contig10040.55.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10040 1047..2159 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927506.15493-UTR-E-fasciculatus_F_contig10040:941..10461622927506.15493-UTR-E-fasciculatus_F_contig10040:941..1046Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10040 942..1046 +
1695995568.4041207-UTR-E-fasciculatus_F_contig10040:941..10461695995568.4041207-UTR-E-fasciculatus_F_contig10040:941..1046Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10040 942..1046 +
1622927506.1883152-UTR-E-fasciculatus_F_contig10040:2159..34241622927506.1883152-UTR-E-fasciculatus_F_contig10040:2159..3424Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10040 2160..3424 +
1695995568.426798-UTR-E-fasciculatus_F_contig10040:2159..34241695995568.426798-UTR-E-fasciculatus_F_contig10040:2159..3424Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10040 2160..3424 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927506.1730778-CDS-E-fasciculatus_F_contig10040:1046..21591622927506.1730778-CDS-E-fasciculatus_F_contig10040:1046..2159Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10040 1047..2159 +
1695995568.4153707-CDS-E-fasciculatus_F_contig10040:1046..21591695995568.4153707-CDS-E-fasciculatus_F_contig10040:1046..2159Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10040 1047..2159 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10040.55.1

>prot_E-fasciculatus_F_contig10040.55.1 ID=prot_E-fasciculatus_F_contig10040.55.1|Name=mRNA_E-fasciculatus_F_contig10040.55.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=371bp
MEFCIACRNYPTLHLTVDAQTPRRLLAAVDAPPSHAKRLCRTRVPLLRAR
KVTWNTPTAVELRFPMFAMTTVDYLCFGRAFEGSLEGVEWPQRLKTLEFD
TSSQFNECIDLAKLPVSLQRLAFGQMFNQSIESVAFLGSLQQLVFGKYSR
FNQPIEGVVWPSALKEVIFHRYGRFDQPIERVTWPTSLEQLAFGVPFEQP
IERATFPASLKQLCVGGWFNSPVEGVLWPDSLQTLVFGERFNRPLDNVRW
PSLLQELTFGLCEDEGHNVMSMHSDFNQRIGSSIWPASLRRLTLGGRFRQ
SLQGLGTWMPNLETLCLLDHGVGSGGDSLLCGIEWPKRLRQLTVFQESNP
NGVLVPSSVEVFCRYNGSYS*
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mRNA from alignment at E-fasciculatus_F_contig10040:942..3424+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10040.55.1 ID=mRNA_E-fasciculatus_F_contig10040.55.1|Name=mRNA_E-fasciculatus_F_contig10040.55.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2483bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10040:942..3424+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGACCCAGTCCTACCTCGTGCTTGAACGCCCTCATCATCGCTTTGGACGA GACGTGCGACGGGAAGAGTTGGTACACGTCGACCAAGGACCTGCAGCTTG CGTCCATGGAGTTCTGCATAGCGTGCAGAAACTATCCGACGTTGCACTTG ACAGTCGACGCACAAACCCCACGCAGGCTGCTGGCCGCTGTAGATGCCCC GCCCTCGCACGCAAAGCGGCTATGCCGGACACGCGTGCCGCTTCTAAGGG CGCGAAAAGTGACGTGGAACACGCCGACAGCAGTAGAATTGAGATTCCCG ATGTTTGCCATGACGACCGTGGACTACTTGTGTTTCGGCCGTGCCTTCGA AGGCAGCCTCGAGGGCGTGGAGTGGCCGCAGCGGCTGAAAACGCTCGAGT TTGACACGAGTTCACAATTCAACGAGTGTATTGATCTGGCAAAATTGCCG GTATCTCTACAAAGACTTGCTTTCGGACAAATGTTCAACCAGTCGATCGA AAGTGTCGCGTTTCTTGGATCGCTGCAGCAGCTGGTATTCGGCAAATACT CGCGCTTCAACCAACCAATCGAGGGCGTTGTATGGCCGTCGGCGCTGAAG GAGGTGATCTTCCACCGGTATGGGCGGTTCGACCAACCTATTGAACGTGT GACTTGGCCAACGTCGTTAGAACAGCTCGCGTTTGGTGTCCCCTTCGAAC AGCCAATCGAACGGGCCACGTTTCCGGCGTCCCTCAAGCAGCTTTGTGTC GGAGGCTGGTTCAACTCGCCCGTCGAGGGCGTTCTATGGCCAGATTCGCT TCAGACGCTCGTTTTCGGAGAAAGATTTAACCGGCCACTTGACAACGTGA GGTGGCCGTCGTTGTTGCAAGAGCTTACGTTTGGACTTTGCGAGGACGAA GGGCACAACGTGATGTCGATGCACTCGGACTTTAACCAGCGTATCGGTAG CAGTATTTGGCCTGCATCGCTCCGGCGACTCACACTAGGCGGCCGCTTCA GGCAGTCGCTGCAAGGACTGGGCACTTGGATGCCCAACCTTGAAACACTT TGTCTTCTTGACCATGGTGTAGGTTCCGGCGGTGATAGCCTTCTCTGCGG AATCGAGTGGCCTAAGCGCCTCCGTCAGCTGACCGTGTTCCAAGAATCGA ACCCGAATGGGGTCTTGGTTCCTTCTTCTGTAGAGGTATTCTGTCGTTAC AACGGTAGCTATAGCTAGTTGTTGTAACCTGGAGGGGATTTAATGGTGCA AATAGGGGCAACCATTCTGCGGTCAACATGGTGTACGATATGCAGTATAT TCTATCGGGCGGAACGTATGGATACGCAAGTAGAAAAATTGGGAGCGCGC TTGAGTTCCCGAGGGATTGGTGCCGCCCGGGTGACGATTTCTCACGTCGG TTGATGACACGAAGACAACACCTCAACAGAAGTGTTACTGCGAGTGTTTT AGCGTTGAATATGGTCTTCTAGGAGTCCCCTAGGCGCGGGGGATTTTTTT GTGTAGCACCTGTTTCTGGCAATCGCATTGTCGTATGCTCACCACACGAC CGGGCGTTAACACGCCTTGGTAAAATGTGACAGTCGGCAACCACTGGATA CATAGTGGCTGGGGATGGAACAATGTGGGTGCCTTGGCCGAAAAATACTC ATGTAATATACACTTAGTCTATCATTGCATGCAAATCGGGTGGGGATGCA AATACCGTTGTAGCTCTTTGATTACTCCTTTCTTCAACCAATAGTTTGAT AGATTTCCCGTGGGCATTACTAGCCTCAAGAATATCTCGTCCCATGCCGG CGAGAGGTGGTTTTCAGGGTGTCCTCCTTCTAGTCAATCCCCTGCTCCAT GCCCACATGGGCGTGTGGCAACAGTTCAGGAGGAGGGTTCGTAATTCTGT GCGAACGGATATCTATCGCAGTAAATCGCAGTGGTGTCGAAGGTTTTGGG GGGGTTGATTTCGTGCTGTAGGTTCTTGTCTGAGCGGTCATCTTTACTAT TGAAATGACGGCTGTGCAGCACCGATATAATGCGTGCAGACGTGAGCACC TCTTCCTTCTCGGAGGTGATGCGTTTCTGTCGGATTCACTCGTTTGTATA TGATGGATGTGTTCTTGGGAAGCATTTTTGTTTGTTTCTCTGGGTCTTGC TCGTTGAACTGGAATCTGAAAGGTGCTCCCTGTTCAGAACTCGGCAAGAT CGTTCTGGTCCTCGTGATCGAGCGCGTCACTACTGTCTGCGGTCTCGAGG TGTTGAACGCTACCCGCTGAAGTATCTGTAACGCTTAAGGTATGAATAGG CAACGCTTATGATACTCGTCGATTTGGTATCTGTTTGGCTATCAGGTTCG TCTACCGCGGTCCTGCATTTACGAATGTCTAATATCGGGATTGGGTTGAT TTTCTAGGTTTGTACAATATATAAATCCGTAGACTGCTGAAGAGGTCAAG CTGGTCGGCGCTACCCCCAGCCGTAGACTGCTG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10040:942..3424+

>mRNA_E-fasciculatus_F_contig10040.55.1 ID=mRNA_E-fasciculatus_F_contig10040.55.1|Name=mRNA_E-fasciculatus_F_contig10040.55.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2226bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10040:942..3424+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGAGTTCTGCATAGCGTGCAGAAACTATCCGACGTTGCACTTGACAGT
CGACGCACAAACCCCACGCAGGCTGCTGGCCGCTGTAGATGCCCCGCCCT
CGCACGCAAAGCGGCTATGCCGGACACGCGTGCCGCTTCTAAGGGCGCGA
AAAGTGACGTGGAACACGCCGACAGCAGTAGAATTGAGATTCCCGATGTT
TGCCATGACGACCGTGGACTACTTGTGTTTCGGCCGTGCCTTCGAAGGCA
GCCTCGAGGGCGTGGAGTGGCCGCAGCGGCTGAAAACGCTCGAGTTTGAC
ACGAGTTCACAATTCAACGAGTGTATTGATCTGGCAAAATTGCCGGTATC
TCTACAAAGACTTGCTTTCGGACAAATGTTCAACCAGTCGATCGAAAGTG
TCGCGTTTCTTGGATCGCTGCAGCAGCTGGTATTCGGCAAATACTCGCGC
TTCAACCAACCAATCGAGGGCGTTGTATGGCCGTCGGCGCTGAAGGAGGT
GATCTTCCACCGGTATGGGCGGTTCGACCAACCTATTGAACGTGTGACTT
GGCCAACGTCGTTAGAACAGCTCGCGTTTGGTGTCCCCTTCGAACAGCCA
ATCGAACGGGCCACGTTTCCGGCGTCCCTCAAGCAGCTTTGTGTCGGAGG
CTGGTTCAACTCGCCCGTCGAGGGCGTTCTATGGCCAGATTCGCTTCAGA
CGCTCGTTTTCGGAGAAAGATTTAACCGGCCACTTGACAACGTGAGGTGG
CCGTCGTTGTTGCAAGAGCTTACGTTTGGACTTTGCGAGGACGAAGGGCA
CAACGTGATGTCGATGCACTCGGACTTTAACCAGCGTATCGGTAGCAGTA
TTTGGCCTGCATCGCTCCGGCGACTCACACTAGGCGGCCGCTTCAGGCAG
TCGCTGCAAGGACTGGGCACTTGGATGCCCAACCTTGAAACACTTTGTCT
TCTTGACCATGGTGTAGGTTCCGGCGGTGATAGCCTTCTCTGCGGAATCG
AGTGGCCTAAGCGCCTCCGTCAGCTGACCGTGTTCCAAGAATCGAACCCG
AATGGGGTCTTGGTTCCTTCTTCTGTAGAGGTATTCTGTCGTTACAACGG
TAGCTATAGCTAGATGGAGTTCTGCATAGCGTGCAGAAACTATCCGACGT
TGCACTTGACAGTCGACGCACAAACCCCACGCAGGCTGCTGGCCGCTGTA
GATGCCCCGCCCTCGCACGCAAAGCGGCTATGCCGGACACGCGTGCCGCT
TCTAAGGGCGCGAAAAGTGACGTGGAACACGCCGACAGCAGTAGAATTGA
GATTCCCGATGTTTGCCATGACGACCGTGGACTACTTGTGTTTCGGCCGT
GCCTTCGAAGGCAGCCTCGAGGGCGTGGAGTGGCCGCAGCGGCTGAAAAC
GCTCGAGTTTGACACGAGTTCACAATTCAACGAGTGTATTGATCTGGCAA
AATTGCCGGTATCTCTACAAAGACTTGCTTTCGGACAAATGTTCAACCAG
TCGATCGAAAGTGTCGCGTTTCTTGGATCGCTGCAGCAGCTGGTATTCGG
CAAATACTCGCGCTTCAACCAACCAATCGAGGGCGTTGTATGGCCGTCGG
CGCTGAAGGAGGTGATCTTCCACCGGTATGGGCGGTTCGACCAACCTATT
GAACGTGTGACTTGGCCAACGTCGTTAGAACAGCTCGCGTTTGGTGTCCC
CTTCGAACAGCCAATCGAACGGGCCACGTTTCCGGCGTCCCTCAAGCAGC
TTTGTGTCGGAGGCTGGTTCAACTCGCCCGTCGAGGGCGTTCTATGGCCA
GATTCGCTTCAGACGCTCGTTTTCGGAGAAAGATTTAACCGGCCACTTGA
CAACGTGAGGTGGCCGTCGTTGTTGCAAGAGCTTACGTTTGGACTTTGCG
AGGACGAAGGGCACAACGTGATGTCGATGCACTCGGACTTTAACCAGCGT
ATCGGTAGCAGTATTTGGCCTGCATCGCTCCGGCGACTCACACTAGGCGG
CCGCTTCAGGCAGTCGCTGCAAGGACTGGGCACTTGGATGCCCAACCTTG
AAACACTTTGTCTTCTTGACCATGGTGTAGGTTCCGGCGGTGATAGCCTT
CTCTGCGGAATCGAGTGGCCTAAGCGCCTCCGTCAGCTGACCGTGTTCCA
AGAATCGAACCCGAATGGGGTCTTGGTTCCTTCTTCTGTAGAGGTATTCT
GTCGTTACAACGGTAGCTATAGCTAG
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