mRNA_E-fasciculatus_F_contig10695.550.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10695.550.1 vs. uniprot
Match: D7G1Z5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Z5_ECTSI) HSP 1 Score: 575 bits (1483), Expect = 1.070e-196 Identity = 492/611 (80.52%), Postives = 504/611 (82.49%), Query Frame = 1
Query: 1 MVEPSSAPRDLGSSGAAXXXXXXXXXRSDLTFRRRNKDNSNAGSSVXXXXXXXXXXXXXAVSRPETSRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAANSNSNSSRLRTPLERYLLLSVMLVAAGLGVRFLWRQLAGLVGAALILSAARRWSGGGVPAVRKPHPPDAPAAAAAALGAPVSDGNQTVEAAASSTADGDTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCFAAAPAELRRFWEDGGPGCQFLVRGPKYISDRKKIPAGPAAMRLVHVDFFSVEREVFHVASKGRCRDRVSAFLKSYEDKGEAAPFLFILNILVPGNPVVATVMYLALDQTTRQGEGVGVGEEGVSSFVPASGSDSARHDTFLAMLARYAEIPGSGYKKLESTRSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPLAGVAGLAGGNGPPPAVRSAGAAGAEALSTEAGTGAGSRGGGLGGAAADRNSDPAGLLPMDDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDV 1833
MVEPSSAPRDL S+GAA RSDLT RRRNKDNSNAGS VXXXXXXXXXXXXX SRPE S R XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX +LRTPLERYLLLSVMLVAAGLGVRFLWRQLAGLVGAALILSAARRWSG PAVRKP LGAPVS G+QTVEA ASS AD +TA XXXXXXXXXX TCFA APAELRRFW+DGGPGCQFLVRGPKYISDRKKIPAGPAAMRLVHVDFFSVE EVFHVASKGRCRDRVSAFLKSYEDKGEAAPFLFILNILVPGNPVVATVMYLALDQTT++ +GVG+GEEGVSS VPA G DSARHDTFLAMLARYAE+PGSGY KLE TRSPS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LAGVAGL GGNGPP A +AGA GAEALST GA SRGGGLGGA ADRNSDPAGLLP+DDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDV
Sbjct: 1 MVEPSSAPRDLDSTGAAAAAS-----RSDLTLRRRNKDNSNAGSVVXXXXXXXXXXXXXXXSRPEASGRRKDKGXXXXXXXXXXXXXRTQXXXXXXXXXXXXXXXXXXX--------------KLRTPLERYLLLSVMLVAAGLGVRFLWRQLAGLVGAALILSAARRWSG--APAVRKPXXXXXXXXXX--LGAPVSGGDQTVEATASSAADCETAGDRGXXXXXXXXXXTGRREGDVVGDGGG-------TCFADAPAELRRFWKDGGPGCQFLVRGPKYISDRKKIPAGPAAMRLVHVDFFSVEGEVFHVASKGRCRDRVSAFLKSYEDKGEAAPFLFILNILVPGNPVVATVMYLALDQTTQRRDGVGLGEEGVSSPVPAGGGDSARHDTFLAMLARYAEVPGSGYNKLERTRSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----LAGVAGLEGGNGPPAAEGAAGA-GAEALST----GAASRGGGLGGAPADRNSDPAGLLPVDDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDV 571
BLAST of mRNA_E-fasciculatus_F_contig10695.550.1 vs. uniprot
Match: D7FIG2_ECTSI (EDR2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG2_ECTSI) HSP 1 Score: 105 bits (262), Expect = 1.950e-20 Identity = 101/386 (26.17%), Postives = 132/386 (34.20%), Query Frame = 1
Query: 796 WEDGGPGCQFLVRGPKYISDRKKIPAGPAAMRLVHVDFFSVERE----VFHVASKGRCRDRVSAFLKSYEDKGEAAPFLFILNILVPGNPVVATVMYLALDQT----------------------------------TRQGEGVGVGEE-GVSSFVPASGSD-SARHDTFLAMLARYAEIPGSGYKKLESTRSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPLAGVAGLAGGNGPPPAVRSAGAAGAEALSTEAGTGAGSRGGGLGGAAADRNSDPAGLLPMDDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDV 1833
W+D FLVRGP Y+ D+ K+PAG A RLV D F+ + + H+AS+G CR+RV A G+ APFLFI+NI V G P V+ V Y A+D+ T G G VGE G++ P D S R F ++A YA+IP S + E ++ PPP P D RN RFKLIP V+ GP++VRKAVG+ P LLG K++ RY+RG YVETD+
Sbjct: 160 WKDAASIHSFLVRGPTYLQDKAKLPAGRAMCRLVGFDCFTENSKGTTRIDHIASRGTCRERVEAMTS-----GDDAPFLFIMNIQVRGTPPVSMVAYWAVDRDGLEEAKDAATAAGTLQGVPSDHIDTTEAAVDETDTENGLGQSVGESNGLTGAGPQGEGDVSGRESVFSRIVASYADIPVSTFGGDECAMMDTA-------------------------------------------------------------------------------------------PPP-------------------------------------------PYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDM 406
BLAST of mRNA_E-fasciculatus_F_contig10695.550.1 vs. uniprot
Match: A0A835ZES7_9STRA (EDR2_C domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES7_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 2.280e-18 Identity = 41/51 (80.39%), Postives = 47/51 (92.16%), Query Frame = 1
Query: 1681 DDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDV 1833
DDFRN+RFKLIPS+V GPF+VR AVGNKPALLGRK++QRY+RG YVETDV
Sbjct: 1 DDFRNERFKLIPSIVEGPFLVRGAVGNKPALLGRKLTQRYYRGAHYVETDV 51
BLAST of mRNA_E-fasciculatus_F_contig10695.550.1 vs. uniprot
Match: A0A7S2WM21_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WM21_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 4.510e-16 Identity = 41/57 (71.93%), Postives = 48/57 (84.21%), Query Frame = 1
Query: 1663 AGLLPMDDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDV 1833
AGL P D FRNQRFKLIP +V GPF+VR AVG KPALLG+K++QRY+RG Y+ETDV
Sbjct: 266 AGLSPSDHFRNQRFKLIPRIVDGPFLVRNAVGAKPALLGQKLTQRYYRGKNYIETDV 322
BLAST of mRNA_E-fasciculatus_F_contig10695.550.1 vs. uniprot
Match: A0A7S2CMY1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMY1_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 2.310e-14 Identity = 38/57 (66.67%), Postives = 49/57 (85.96%), Query Frame = 1
Query: 1663 AGLLPMDDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDV 1833
AG+ P++ RNQRFKLIP++ GPF+V++AVG KPALLG+K++QRYFRG YVETDV
Sbjct: 365 AGVYPLEHLRNQRFKLIPAITEGPFLVKQAVGAKPALLGQKLTQRYFRGEHYVETDV 421
BLAST of mRNA_E-fasciculatus_F_contig10695.550.1 vs. uniprot
Match: K3W5F2_GLOUD (START domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W5F2_GLOUD) HSP 1 Score: 84.3 bits (207), Expect = 2.070e-13 Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 1
Query: 787 RRFWEDGGPGCQFLVRGPKYISDRKKIPAGPAAMRLVHVDFFSVEREVFHVASKGRCRDRVSAFLKSYEDKGEAAPFLFILNILVPGNPVVATVMY 1074
R W + G LVRGP Y++DR+KIP+ P A RLV +D F+ + H+AS R + V LK +E++G PF F++N +VPGNP ++ V+Y
Sbjct: 333 RSMWAEPDGGT-VLVRGPDYLTDRRKIPSAPPAFRLVGIDLFNSSSSIEHIAS--RPDNVVQKELKRHEEQGTEMPFTFVINFVVPGNPCISLVLY 425
BLAST of mRNA_E-fasciculatus_F_contig10695.550.1 vs. uniprot
Match: A0A7S3XTA9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTA9_HETAK) HSP 1 Score: 78.2 bits (191), Expect = 2.710e-13 Identity = 36/62 (58.06%), Postives = 49/62 (79.03%), Query Frame = 1
Query: 1654 SDPA--GLLPMDDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDV 1833
+DPA G LP D F+N RFKL+PS+V GP+I ++AV NKPA+LG+K++QRYFR Y+E D+
Sbjct: 27 ADPADEGRLPADAFQNLRFKLVPSIVEGPWICQRAVKNKPAILGQKITQRYFRTEHYLEVDL 88
BLAST of mRNA_E-fasciculatus_F_contig10695.550.1 vs. uniprot
Match: W7U3Y4_9STRA (PX domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3Y4_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.220e-12 Identity = 36/60 (60.00%), Postives = 47/60 (78.33%), Query Frame = 1
Query: 1654 SDPAGLLPMDDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDV 1833
SD G + DF+N+RFKLIPS+V GP +++ AVGNKP +LG+K++QRYFRG YVE DV
Sbjct: 698 SDRGGRYALSDFKNKRFKLIPSIVDGPSMIKWAVGNKPTILGQKLTQRYFRGEDYVEVDV 757
BLAST of mRNA_E-fasciculatus_F_contig10695.550.1 vs. uniprot
Match: H3GU13_PHYRM (START domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GU13_PHYRM) HSP 1 Score: 82.0 bits (201), Expect = 1.840e-12 Identity = 49/137 (35.77%), Postives = 74/137 (54.01%), Query Frame = 1
Query: 775 PAELRRFWEDGGPGCQFLVRGPKYISDRKKIPAGPAAMRLVHVDFFSVEREVFHVASKGRCRDRVSAFLKSYEDKGEAAPFLFILNILVPGNPVVATVMYLALDQTTRQGEGVGVGEEGVSSFVPASGSDSARHDTF 1185
P+ L R G +VRGP Y+SDR+KIP+ ++RLV VD F + H+AS R + V LK +E++G PF F++N +VPGNP + V+Y + +G E ++ F+ GSD R++ F
Sbjct: 395 PSNLPRAMWAEPDGQAMMVRGPDYLSDRRKIPSQSPSLRLVGVDLFQSSESIEHIAS--RPDNSVQRELKRHEEQGTEMPFTFVVNFVVPGNPRINVVLYYQAPHPSVMTDG-SPSAELMADFL--EGSDEFRNERF 526
BLAST of mRNA_E-fasciculatus_F_contig10695.550.1 vs. uniprot
Match: A0A6H5JGP3_9PHAE (EDR2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP3_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 2.460e-12 Identity = 33/59 (55.93%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 1657 DPAGLLPMDDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDV 1833
D G LP++D RN+R KL P V+ GP++VRKAVG KP ++G+K++ RYFR PGY E D+
Sbjct: 16 DLEGGLPLNDIRNRRLKLFPKVLEGPWVVRKAVG-KPCVIGKKLTARYFRRPGYFEVDI 73 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10695.550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10695.550.1 >prot_E-fasciculatus_F_contig10695.550.1 ID=prot_E-fasciculatus_F_contig10695.550.1|Name=mRNA_E-fasciculatus_F_contig10695.550.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=611bp MVEPSSAPRDLGSSGAAAAAAAAAASRSDLTFRRRNKDNSNAGSSVEPSPback to top mRNA from alignment at E-fasciculatus_F_contig10695:111..3734- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10695.550.1 ID=mRNA_E-fasciculatus_F_contig10695.550.1|Name=mRNA_E-fasciculatus_F_contig10695.550.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3624bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10695:111..3734- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10695:111..3734- >mRNA_E-fasciculatus_F_contig10695.550.1 ID=mRNA_E-fasciculatus_F_contig10695.550.1|Name=mRNA_E-fasciculatus_F_contig10695.550.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3666bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10695:111..3734- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |