mRNA_E-fasciculatus_F_contig1069.547.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1069.547.1 vs. uniprot
Match: D8LIY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY5_ECTSI) HSP 1 Score: 1805 bits (4675), Expect = 0.000e+0 Identity = 1513/2016 (75.05%), Postives = 1578/2016 (78.27%), Query Frame = 1
Query: 1 MGTRSGSGSGRRSVGQAAPRSSSSRMWENPPPVRATTRSAGPIRSRTSRHAGFSSSSAGNLWGDAESSTNTLNDGQVPGRRPRTAPAVQTMFDGGQTGKRSRFPAGFPSDAAQGYNRDRLPELSRSTSPPPHRSTSNTSPIFRHDSIDNRAGYSHVRRRSDFVPVRALLILPDSSVGHEVSTVDMSAFDSVSFLRAAIQADIVRDTRSAEETSAAGSSAAGHRHGNGRRSRGDLCPPFTFCYADGVAIDPGQEKRLSVKDIAVDSALQATGAGAAADRSGSNQRWDQGGDSGEMRVFLRACEPLTEQNASHGGGGGVLHRWESLQGGAWNTEAYLRGPSSGSPDSAFSKHGGADGSLSSSIFQNPASSSAFDANAGYGTQRGGTGNGLSRLQGGSVHGTGAGSVSSSSFTTGGVQQHHSRRISVSFDEAKAARRRTIQEQVMLLAASKVTLITKVFRGYRARILFRERLGLHRGACKIQQCARRKAAKNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRRNEAKAELARKKKEEXXXXXXXXXXXXXXXARLARRREEDEAIVRIQSLARARGAKKEAIARRKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQVRELKKRRYDASVXXXXXXXXXXXXXXTLEXXXXXXXXXLIQKTARGRRSRSHAKVLAEQHRREAHAEEQXXXXXXXXXXXXXXXALLHQLPTEMSTGDLYGIENDRKDSGYDGGVSDNGKGSTPPCEHQQDGGLSAHTEQASSKHVEFLMSPSTTDEVVAQLALDISEQVNSFVAVQEQIRRFEAGVAKTPTGPE-KSDGEGGSSRGVDNHGDDVSPSVKSDEHEHPSETDPKLGSSHSASAEQQSGEEGRXXXXXXXXXXXXXXXFLLADDPPADALVVAEGTMARVGEERDTKEEVAVDRRAEEGQDVFKSDFSLDCEPESGLATPAEESQPAQKEAHAEQAEVHGQATEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEEWRSDFASLGPPGEDTEHGGEGLDKLDKVSDVNEEPSVSGSEHQLEKAVVPAEAEKSGVKTDLASSDGDRATVEDDDGRDVSTSPRSLEVVQETGKVQREGPGAETAEETSAAEEPSAPLAPTMMSENEPLVLQHEPSTEPQLPGAAQEQEGDETCSFAACDTTEQAPMASAKGTLDEQQPTGGVSGARGVAPATPKDDDAPEDDDVSVLAAEIVALAVSEAKEALLLEAKRARPESSPHADTHQRISVSGRFIDVNPGILDLAGRDRINRKGATADNAENSEETLTSSDIASGDSGLGRSAPQGEEMPATAIDGHHPTPGGHSSPDLHLRLEDLPASREDVELRPTGVGSETRMMAEAPEAEKGPTSKTIDSTEPPKLEQGAGDSVDGALADLGMCRPGSLGEEMTETATKEEGGSLPALAVPDEQRDGVDTGTETPRVIERSLAPIDVEESERAVSPPAVPDEEQVVPSPVEQEAVAAAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL-----------------------------------------GVPGEEQGGADVGMLNEAXXXXXXXXXXXXXXXXXXXXXXXXERDVPAPVEQELVVAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEEGDALPSLVVPDEIQGGVDPRTDMPHE-ESSSTPTGVEEGGQAPAEQEAVVKVEE---------VDAVASSPTVFDEKQGAHSPAAVETTAVMEDGAAPGGGEQGNKAVPSLGMPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALPSRVVSDEQRDGADTGTDIAHEVEGGSTPTGVEDGDQAVSSSAMPDEERDVP 5892
MGTRSGSG+GRRSVGQAAPRSS+SR+WENPPP RATTRSAGPIRSR RHAG SSSSAGNLWGDAE S+NTL +GQVPGRRPRTAPAVQTMFDGGQTGKRSRFP GYNRDRLPELSRSTSPPPHRSTSNTS IF HDS N AGYSHVRRRSD VPVRALLILPDSSVGHEVSTVDMSAFDSVSFLRAAIQAD+ RDT AEETSA +SAAGHRHGNGRR RGDLCPPFTFCYADGVAIDPGQE+RLSVKDIAVD ALQATGA AA RS S+Q DQGG SGEMRVFLRACEPLTEQ ASHGGGG VLHRWESLQGGAWNTEAYLRG SSGSPDSAFSKHGGADGSLSSS FQNPASSS+FD NAGYG QRGG G+G SRL GG V G GAGSVSSSS TTGGVQ HHSRRISVSFDEAK ARRRTIQEQVMLLAASKVTLITKVFRGYRARILFRERL LH+ ACKIQQCARRKAAKNE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RNEAKAELARK+KEE XXXXXXXX DEAIVRIQSLARARGAKKEAI RR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AAQVRELKKRRYDAS XXXXXXXXXXX XXXXXXXX LIQ+TARGRR RS AK+LA+QHRREAHAEE XXXXXXXXXX LLH+L T+ ST DLYGIEN+ +DSGY GG SDN KGS PP +HQQ G LS ASSKHVEFL S D+V A+LALD++EQ+NSFV VQ QIRR EAGVAKTPTGPE KSD E GSSRGVDNHGDD SP SDE EHPSE DP L SSHSASAEQQS E G XXXXX L D P DALVVA+GTMARVGEERDTKEE VDRRAEEGQDVFKS FSL EPESGLA PAEE+QPAQ EAHAE+ EV GQATEE EEEEWRSDFA L PGED E GEGLD+LDKVSDVNEEPSVSG+EHQL+KAVV AEAEKSGVKT+LASSDGD + VEDDD R +ST P+S E VQE G VQ+EGPGAETAEETS AEEPS P PTMMSENEPL+LQHEPSTEPQLPGAAQEQEGD T S AACD E APM SAKGTLDEQQPTGGVSGARGVAPATP EDD V VLA EIVALAVSEAKEALLLEAK+ARPESSPH DTH+RIS+SG FIDVN GIL+ GRD N KG T+D AE S ET SSDIASGDSGL RS PQGEEMPA AI GHHPTPG HSSP+L LRL+DLP+SREDVELRPTGVGSE MAE E E+GPTS+TIDSTEPPKLEQ AGDS DGALADLG+ RPGSLGEEM ETATK EG +LP+L +PDEQ+DGVDTG E +E AP VEE E+AVSP AVPDEE+ VP+PVEQEAVAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX DVPAP EQELV V+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EEGDALPSLVVPDE QGGV PRT+M HE ES GQ PAEQE V VE+ VDA SSPTVFDE XXXXXXXXXXXXXXXXXXXXXXXXXXXX D +PS DEQR GADTGT++ H+VEGGS PTGVEDGDQA S A PDEE+DVP
Sbjct: 1 MGTRSGSGNGRRSVGQAAPRSSTSRIWENPPPARATTRSAGPIRSRIPRHAGLSSSSAGNLWGDAEISSNTLGNGQVPGRRPRTAPAVQTMFDGGQTGKRSRFP---------GYNRDRLPELSRSTSPPPHRSTSNTSAIFGHDSNHNHAGYSHVRRRSDLVPVRALLILPDSSVGHEVSTVDMSAFDSVSFLRAAIQADVARDTHWAEETSA--NSAAGHRHGNGRRGRGDLCPPFTFCYADGVAIDPGQEERLSVKDIAVDPALQATGAAAAVGRSDSDQLSDQGGGSGEMRVFLRACEPLTEQGASHGGGG-VLHRWESLQGGAWNTEAYLRGSSSGSPDSAFSKHGGADGSLSSSTFQNPASSSSFDPNAGYGAQRGGNGSGSSRLPGGVVLGAGAGSVSSSSLTTGGVQPHHSRRISVSFDEAKDARRRTIQEQVMLLAASKVTLITKVFRGYRARILFRERLELHQRACKIQQCARRKAAKNELGRRAYRRDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNEAKAELARKEKEEEERELAAXXXXXXXXXXXXXXXXXDEAIVRIQSLARARGAKKEAIVRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAQVRELKKRRYDASAKIAXXXXXXXXXXXXXXXXXXXXXXILIQRTARGRRGRSRAKILADQHRREAHAEENAXXXXXXXXXXNSSRTLLHRLETDTSTSDLYGIENNPRDSGYAGGASDNDKGSIPPYKHQQGGDLSVQAGHASSKHVEFLTGLSAPDDVAARLALDVNEQINSFVVVQAQIRRLEAGVAKTPTGPEEKSDEEDGSSRGVDNHGDDDSPPEGSDEQEHPSEFDPTLDSSHSASAEQQSAEGGGQEEAWKSDFEXXXXXXFLLHDEPVDALVVAKGTMARVGEERDTKEEGVVDRRAEEGQDVFKSGFSLGGEPESGLAAPAEENQPAQNEAHAEEPEVPGQATEEVFKSDFVLDNGSAGTLAVDAADINMMGDESHEEEEWRSDFAPLETPGEDNELRGEGLDELDKVSDVNEEPSVSGTEHQLKKAVVSAEAEKSGVKTELASSDGDCSAVEDDDDRKISTPPQSPEAVQEAGVVQQEGPGAETAEETSVAEEPSVPPLPTMMSENEPLMLQHEPSTEPQLPGAAQEQEGDRTYSSAACDNAEPAPMVSAKGTLDEQQPTGGVSGARGVAPATP------EDDHVLVLAGEIVALAVSEAKEALLLEAKKARPESSPHDDTHRRISLSGHFIDVNTGILEWTGRDGTNGKGETSDKAEISGETSKSSDIASGDSGLDRSTPQGEEMPAAAIGGHHPTPGVHSSPNLDLRLQDLPSSREDVELRPTGVGSEMATMAENLEGERGPTSRTIDSTEPPKLEQDAGDSADGALADLGLGRPGSLGEEMAETATK-EGDALPSLVLPDEQQDGVDTGVEISSGVEGGSAPTAVEEGEQAVSPLAVPDEERDVPAPVEQEAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDTAASPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVPAPAEQELVAVVKDSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGDALPSLVVPDEQQGGVKPRTEMSHEAESXXXXXXXXXXGQGPAEQETVATVEDNGPPAGPEQVDAAGSSPTVFDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDVVPS----DEQRHGADTGTEVVHKVEGGSAPTGVEDGDQAALSPAAPDEEQDVP 1993
BLAST of mRNA_E-fasciculatus_F_contig1069.547.1 vs. uniprot
Match: A0A6H5K0L4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L4_9PHAE) HSP 1 Score: 986 bits (2549), Expect = 5.920e-302 Identity = 885/1372 (64.50%), Postives = 949/1372 (69.17%), Query Frame = 1
Query: 1972 AQVRELKKRRYDASVXXXXXXXXXXXXXXTLEXXXXXXXXXLIQKTARGRRSRSHAKVLAEQHRREAHAEEQXXXXXXXXXXXXXXXALLHQLPTEMSTGDLYGIENDRKDSGYDGGVSDNGKGSTPPCEHQQDGGLSAHTEQASSKHVEFLMSPSTTDEVVAQLALDISEQVNSFVAVQEQIRRFEAGVAKTPTGPE-KSDGEGGSSRGVDNHGDDVSPSVKSDEHEHPSETDPKLGSSHSASAEQQSGEEGRXXXXXXXXXXXXXXXFLLADDPPADALVVAEGTMARVGEERDTKEEVAVDRRAEEGQDVFKSDFSLDCEPESGLATPAEESQPAQKEAHAEQAEVHGQATEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEEWRSDFASLGPPGEDTEHGGEGLDKLDKVSDVNEEPSVSGSEHQLEKAVVPAEAEKSGVKTDLASSDGDRATVEDDDGRDVSTSPRSLEVVQETGKVQREGPGAETAEETSAAEEPSAPLAPTMMSENEPLVLQHEPSTEPQLPGAAQEQEGDETCSFAACDTTEQAPMASAKGTLDEQQPTGGVSGARGVAPATPKDDDAPEDDDVSVLAAEIVALAVSEAKEALLLEAKRARPESSPHADTHQRISVSGRFIDVNPGILDLAGRDRINRKGATADNAENSEETLTSSDIASGDSGLGRSAPQGEEMPATAIDGHHPTPGGHSSPDLHLRLEDLPASREDVELRPTGVGSETRMMAEAPEAEKGPTSKTIDSTEPPKLEQGAGDSVDGALADLGMCRPGSLGEEMTETATKEEGGSLPALAVPDEQRDGVDTGTETPRVIERSLAPIDVEESERAVSPPAVPDEEQVVPSPVEQEAVAAAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVPGEEQGGADVGMLNEAXXXXXXXXXXXXXXXXXXXXXXXXE-----------------------------------------RDVPAPVEQELVVAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEEGDALPSLVVPDEIQGGVDPRTDMPHE-ESSSTPTGVEEGGQAPAEQEAVVKVEE---------VDAVASSPTVFDEKQGAHSPAAVETTAVMEDGAAPGGGEQGNKAVPSLGMPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALPSRVVSDEQRDGADTGTDIAHEVEGGSTPTGVEDGDQAVSSSAMPDEERDVPAPVEQETTAAMND 5931
AQVRELKKR XXXXXXXXXXXXXX XX LIQ+TARGRR RS AK+LA+QHRREA+AEE ALLH+L T++ST DLYGIE++R+DSGY G SDN +GS PPCEHQQ LS+ TE ASSKHVEFL SPS DEV A+LALD++EQVNSFVAVQ +IRR EAGVAKTPTGPE KSDGE SSRGV+NHGDD+SP SDE EHPSE DP LG SH ASAEQQ XXXXXXXXXXXXXXX L DD DALV+AEGTMAR GEERD KEE VDR A SL+ EPES LA+P EE+QPAQ EAHAE+AEV GQA EEXXXXXXXXXXXX EEEEWRSDFASL PGEDTEHGGEGLD+LDKVSDV EEPS SG+EHQ EKAVVPAEAE+ VKT LAS DGDR+ VEDDDG STSPRS VQE G VQ+EGPGAETAE T AAEEPS P APT+++ENEPL+LQ EPSTEPQLPGAAQ QEGDETCS AACD E APM AKGTLDEQQPTGGVS RGVAPATP EDDDVSV A EIVALAVSEA+EALLLEAK ARPESSPH DTH+RIS+SGRF DVN GIL+ AGRD N KGAT+D AE EET SSDI SGDSGL RS P GEEMPA AI GHHPTPG SS +L LRL+DLPASREDVELRPTGVGSE MAEA E ++GPTS+TIDSTEPPK+EQ AGDS DGALADLG RPGSLGE++ ETATKEE +LP+L +P+EQ+DGVDTG E +E AP VEE ERAVSPPAVPDEE+ VP+PVEQEAVAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + E XXXXXXXXXXXXXXXXXXXXXXXX +D PAPVEQELV AVE XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LEEGDALPSLV+PDE QGGVDPRT+MPHE ESSS PT VE G Q PAEQEAV VE+ VDA SSPTVF GN SLGMP DA+PS ++SDEQR GAD + QAVSS A+PDEERDV APVEQE AA+ D
Sbjct: 106 AQVRELKKRXXXXXXXXXXXXXXXXXXXXXXXXXNKKRAAVLIQRTARGRRGRSRAKILADQHRREAYAEENAATVIQKVARGNSTRALLHRLETDISTRDLYGIEHNRRDSGYADGASDNDEGSIPPCEHQQGVDLSSQTEHASSKHVEFLTSPSAPDEVAARLALDVNEQVNSFVAVQAKIRRLEAGVAKTPTGPEEKSDGEDRSSRGVENHGDDISPPEGSDEQEHPSEFDPTLGPSHPASAEQQXXXXXXXXXXXXXXXXXXXXXXFLLDDESVDALVLAEGTMARAGEERDVKEEGVVDREAXXXXXXXXXXXSLESEPESCLASPTEENQPAQNEAHAEEAEVPGQAMEEXXXXXXXXXXXXGGTLSVDAADINMMGDESHEEEEWRSDFASLETPGEDTEHGGEGLDELDKVSDVQEEPSASGNEHQSEKAVVPAEAERGVVKTGLASFDGDRSAVEDDDGHKNSTSPRSPGAVQEAGVVQQEGPGAETAEVTIAAEEPSVPPAPTIINENEPLILQQEPSTEPQLPGAAQVQEGDETCSSAACDNAEPAPMVPAKGTLDEQQPTGGVSDTRGVAPATP------EDDDVSVPAGEIVALAVSEAEEALLLEAKDARPESSPHDDTHRRISLSGRFKDVNTGILEWAGRDGTNGKGATSDKAEIFEETSKSSDIVSGDSGLDRSTPHGEEMPAAAIGGHHPTPGVRSSLNLDLRLQDLPASREDVELRPTGVGSERVTMAEALEGQRGPTSRTIDSTEPPKMEQDAGDSADGALADLGFGRPGSLGEDLVETATKEEADALPSLVLPNEQQDGVDTGVEISDGVEGGSAPAGVEEGERAVSPPAVPDEERDVPAPVEQEAVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTSASPSRLEVERYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDAPAPVEQELVAAVEDIVTPVEVDAAARYAXXXXXXXXXXXXXXXXXXXXXXXXXAPASSEHVNAVASPPDVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAD---LEEGDALPSLVLPDEQQGGVDPRTEMPHETESSSAPTDVEGGEQGPAEQEAVATVEDSATPAGPEQVDAAGSSPTVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNHVTSSLGMPRAELNEPAPSEEALVAEARDTTAPVGLEEGDAVPSLIMSDEQRHGADKEAEXXXXXXXXXXXXXXXXXXQAVSSPAVPDEERDVLAPVEQEAVAAIGD 1468 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1069.547.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1069.547.1 >prot_E-fasciculatus_F_contig1069.547.1 ID=prot_E-fasciculatus_F_contig1069.547.1|Name=mRNA_E-fasciculatus_F_contig1069.547.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=2077bp MGTRSGSGSGRRSVGQAAPRSSSSRMWENPPPVRATTRSAGPIRSRTSRHback to top mRNA from alignment at E-fasciculatus_F_contig1069:2..12171- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1069.547.1 ID=mRNA_E-fasciculatus_F_contig1069.547.1|Name=mRNA_E-fasciculatus_F_contig1069.547.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=12170bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1069:2..12171- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1069:2..12171- >mRNA_E-fasciculatus_F_contig1069.547.1 ID=mRNA_E-fasciculatus_F_contig1069.547.1|Name=mRNA_E-fasciculatus_F_contig1069.547.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=12462bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1069:2..12171- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |