mRNA_E-fasciculatus_F_contig10688.545.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10688.545.1
Unique NamemRNA_E-fasciculatus_F_contig10688.545.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig10688.545.1 vs. uniprot
Match: A0A6H5KHY9_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHY9_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.550e-28
Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 1 
Query:    1 IYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEVS 159
            IYRN NLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEV 
Sbjct:   20 IYRNDNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEVD 72
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BLAST of mRNA_E-fasciculatus_F_contig10688.545.1 vs. uniprot
Match: D7G7K4_ECTSI (Histone acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K4_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 6.810e-28
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 1 
Query:    1 IYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEVS 159
            IYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEV 
Sbjct:  361 IYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEVD 413
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BLAST of mRNA_E-fasciculatus_F_contig10688.545.1 vs. uniprot
Match: A0A7S2E549_9STRA (Histone acetyltransferase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E549_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 5.230e-23
Identity = 44/55 (80.00%), Postives = 49/55 (89.09%), Query Frame = 1 
Query:    1 IYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEVSPR 165
            IYRNGNL+MFEVDG +++ Y QNLC LAK+FLDHKTLYYDVDPFLFYVLCEV  R
Sbjct:   83 IYRNGNLSMFEVDGFDERIYCQNLCYLAKMFLDHKTLYYDVDPFLFYVLCEVDER 137
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BLAST of mRNA_E-fasciculatus_F_contig10688.545.1 vs. uniprot
Match: A0A4S4D8A9_CAMSI (MYST-type HAT domain-containing protein n=1 Tax=Camellia sinensis var. sinensis TaxID=542762 RepID=A0A4S4D8A9_CAMSI)

HSP 1 Score: 92.4 bits (228), Expect = 1.340e-22
Identity = 43/55 (78.18%), Postives = 46/55 (83.64%), Query Frame = 1 
Query:    1 IYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEVSPR 165
            IYR+G L+MFEVDG + K YGQNLC LAKLFLDHKTLYYDVD FLFYVLCE   R
Sbjct:   33 IYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDR 87
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BLAST of mRNA_E-fasciculatus_F_contig10688.545.1 vs. uniprot
Match: A0A2G2V730_CAPBA (Histone acetyltransferase n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2V730_CAPBA)

HSP 1 Score: 92.8 bits (229), Expect = 2.110e-22
Identity = 43/55 (78.18%), Postives = 47/55 (85.45%), Query Frame = 1 
Query:    1 IYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEVSPR 165
            IYR+G L+MFEVDG + K YGQNLC LAKLFLDHKTLYYDV+PFLFYVLCE   R
Sbjct:   14 IYRSGILSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVNPFLFYVLCECDNR 68
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BLAST of mRNA_E-fasciculatus_F_contig10688.545.1 vs. uniprot
Match: A0A1E7EY35_9STRA (Histone acetyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EY35_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.800e-22
Identity = 44/55 (80.00%), Postives = 48/55 (87.27%), Query Frame = 1 
Query:    1 IYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEVSPR 165
            IYR GNL+MFEVDG E+K Y QNLC +AKLFLDHKTLY+DVDPFLFYVLCEV  R
Sbjct:  137 IYRKGNLSMFEVDGFEEKIYCQNLCYIAKLFLDHKTLYFDVDPFLFYVLCEVDER 191
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BLAST of mRNA_E-fasciculatus_F_contig10688.545.1 vs. uniprot
Match: A0A7S4ER08_9STRA (Histone acetyltransferase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ER08_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 3.820e-22
Identity = 44/55 (80.00%), Postives = 49/55 (89.09%), Query Frame = 1 
Query:    1 IYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEVSPR 165
            IYRNGNL+MFEVDG E++ Y QNLC +AKLFLDHKTLY+DVDPFLFYVLCEV  R
Sbjct:  682 IYRNGNLSMFEVDGFEERIYCQNLCYIAKLFLDHKTLYFDVDPFLFYVLCEVDDR 736
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10688.545.1 vs. uniprot
Match: A0A7S2E8M6_TRICV (Histone acetyltransferase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E8M6_TRICV)

HSP 1 Score: 95.9 bits (237), Expect = 4.100e-22
Identity = 43/55 (78.18%), Postives = 49/55 (89.09%), Query Frame = 1 
Query:    1 IYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEVSPR 165
            IYRNGNL+MFEVDG E++ Y QNLC +AK+FLDHKTLY+DVDPFLFYVLCEV  R
Sbjct:  138 IYRNGNLSMFEVDGYEERIYCQNLCYIAKMFLDHKTLYFDVDPFLFYVLCEVDNR 192
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10688.545.1 vs. uniprot
Match: A0A7S2YLE9_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YLE9_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 4.820e-22
Identity = 43/55 (78.18%), Postives = 48/55 (87.27%), Query Frame = 1 
Query:    1 IYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEVSPR 165
            IYR GNL+MFE+DG E+K Y QNLC +AKLFLDHKTLY+DVDPFLFYVLCEV  R
Sbjct:  137 IYRCGNLSMFEIDGLEEKIYSQNLCYIAKLFLDHKTLYFDVDPFLFYVLCEVDDR 191
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10688.545.1 vs. uniprot
Match: A0A7R9VE07_9CHLO (Histone acetyltransferase n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VE07_9CHLO)

HSP 1 Score: 95.1 bits (235), Expect = 4.940e-22
Identity = 42/55 (76.36%), Postives = 47/55 (85.45%), Query Frame = 1 
Query:    1 IYRNGNLAMFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEVSPR 165
            IYRNGN+ MFEVDG ++K Y QNLC LAKLFLDHKTLYYDVD FLFY+LCE+  R
Sbjct:  121 IYRNGNVCMFEVDGKKEKTYSQNLCFLAKLFLDHKTLYYDVDLFLFYILCEIDER 175
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10688.545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHY9_9PHAE1.550e-2896.23Histone acetyltransferase n=1 Tax=Ectocarpus sp. C... [more]
D7G7K4_ECTSI6.810e-2898.11Histone acetyltransferase n=1 Tax=Ectocarpus silic... [more]
A0A7S2E549_9STRA5.230e-2380.00Histone acetyltransferase n=1 Tax=Helicotheca tame... [more]
A0A4S4D8A9_CAMSI1.340e-2278.18MYST-type HAT domain-containing protein n=1 Tax=Ca... [more]
A0A2G2V730_CAPBA2.110e-2278.18Histone acetyltransferase n=1 Tax=Capsicum baccatu... [more]
A0A1E7EY35_9STRA3.800e-2280.00Histone acetyltransferase n=1 Tax=Fragilariopsis c... [more]
A0A7S4ER08_9STRA3.820e-2280.00Histone acetyltransferase n=1 Tax=Pseudo-nitzschia... [more]
A0A7S2E8M6_TRICV4.100e-2278.18Histone acetyltransferase (Fragment) n=1 Tax=Trier... [more]
A0A7S2YLE9_9STRA4.820e-2278.18Histone acetyltransferase (Fragment) n=1 Tax=Amphi... [more]
A0A7R9VE07_9CHLO4.940e-2276.36Histone acetyltransferase n=1 Tax=Chlamydomonas eu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10688contigE-fasciculatus_F_contig10688:43..210 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score98.2
Seed ortholog evalue1.1e-18
Seed eggNOG ortholog2880.D7G7K4
KEGG koko:K11304,ko:K11308
KEGG Pathwayko05166,map05166
GOsGO:0000123,GO:0002376,GO:0002520,GO:0003674,GO:0003824,GO:0004402,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006355,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007275,GO:0008080,GO:0008134,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009987,GO:0010224,GO:0010468,GO:0010485,GO:0010506,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016043,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0030097,GO:0030099,GO:0030154,GO:0031248,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034212,GO:0034641,GO:0034708,GO:0035064,GO:0035097,GO:0036211,GO:0042393,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043543,GO:0043967,GO:0043981,GO:0043982,GO:0043984,GO:0043995,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044665,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048580,GO:0048583,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051716,GO:0060255,GO:0061733,GO:0065007,GO:0070013,GO:0071339,GO:0071704,GO:0071840,GO:0072487,GO:0080090,GO:0090304,GO:0140030,GO:0140034,GO:1901360,GO:1901564,GO:1902493,GO:1902494,GO:1902562,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990234,GO:2000026,GO:2000028,GO:2000112,GO:2000113,GO:2000241,GO:2001141
EggNOG free text desc.histone acetyltransferase activity
EggNOG OGsCOG5027@1,KOG2747@2759
EC2.3.1.48
COG Functional cat.B
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Model size168
Cds size144
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927567.3769987-CDS-E-fasciculatus_F_contig10688:42..1861622927567.3769987-CDS-E-fasciculatus_F_contig10688:42..186Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10688 43..186 -
1695995599.371145-CDS-E-fasciculatus_F_contig10688:42..1861695995599.371145-CDS-E-fasciculatus_F_contig10688:42..186Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10688 43..186 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927567.388012-UTR-E-fasciculatus_F_contig10688:186..2101622927567.388012-UTR-E-fasciculatus_F_contig10688:186..210Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10688 187..210 -
1695995599.3820767-UTR-E-fasciculatus_F_contig10688:186..2101695995599.3820767-UTR-E-fasciculatus_F_contig10688:186..210Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10688 187..210 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10688.545.1prot_E-fasciculatus_F_contig10688.545.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10688 43..186 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10688.545.1

>prot_E-fasciculatus_F_contig10688.545.1 ID=prot_E-fasciculatus_F_contig10688.545.1|Name=mRNA_E-fasciculatus_F_contig10688.545.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=48bp
MFEVDGGEQKEYGQNLCSLAKLFLDHKTLYYDVDPFLFYVLCEVSPR*
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mRNA from alignment at E-fasciculatus_F_contig10688:43..210-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10688.545.1 ID=mRNA_E-fasciculatus_F_contig10688.545.1|Name=mRNA_E-fasciculatus_F_contig10688.545.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=168bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10688:43..210- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATCTACCGGAACGGCAACCTTGCCATGTTCGAGGTAGACGGCGGGGAACA
GAAGGAGTACGGGCAGAACCTGTGCTCTCTGGCCAAGCTATTCTTGGACC
ACAAGACCTTGTACTACGACGTGGACCCCTTCCTCTTTTACGTCTTGTGC
GAGGTCAGTCCGCGTTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10688:43..210-

>mRNA_E-fasciculatus_F_contig10688.545.1 ID=mRNA_E-fasciculatus_F_contig10688.545.1|Name=mRNA_E-fasciculatus_F_contig10688.545.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=288bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10688:43..210- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTTCGAGGTAGACGGCGGGGAACAGAAGGAGTACGGGCAGAACCTGTG
CTCTCTGGCCAAGCTATTCTTGGACCACAAGACCTTGTACTACGACGTGG
ACCCCTTCCTCTTTTACGTCTTGTGCGAGGTCAGTCCGCGTTGAATGTTC
GAGGTAGACGGCGGGGAACAGAAGGAGTACGGGCAGAACCTGTGCTCTCT
GGCCAAGCTATTCTTGGACCACAAGACCTTGTACTACGACGTGGACCCCT
TCCTCTTTTACGTCTTGTGCGAGGTCAGTCCGCGTTGA
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