prot_E-fasciculatus_F_contig10686.544.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10686.544.1
Unique Nameprot_E-fasciculatus_F_contig10686.544.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length156
Homology
BLAST of mRNA_E-fasciculatus_F_contig10686.544.1 vs. uniprot
Match: D7FXI8_ECTSI (Protein farnesyltransferase subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI8_ECTSI)

HSP 1 Score: 278 bits (711), Expect = 4.720e-89
Identity = 132/145 (91.03%), Postives = 136/145 (93.79%), Query Frame = 0
Query:    1 MCELNFLPLRPGALEDEELAEFTDQGIVNAAGEAVLMRAKHVKYLMRGLSGLGPGFISLDASRPWMVYWILHSLDLLDHFPQQEMTERVLQTVLSCQDTINGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIERYVCHACF 145
            MCELNFLPLRPGALEDEELAEFTDQGIVNAAGEAVLMR KH  YLMRGL GLGPGFISLDASRPWMVYWILHSLDLLDHFPQQEMT+R+L+TVLSCQDTINGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIER   +  F
Sbjct:   44 MCELNFLPLRPGALEDEELAEFTDQGIVNAAGEAVLMRTKHEVYLMRGLCGLGPGFISLDASRPWMVYWILHSLDLLDHFPQQEMTQRILRTVLSCQDTINGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIERSALYRLF 188          
BLAST of mRNA_E-fasciculatus_F_contig10686.544.1 vs. uniprot
Match: A0A6H5KNE5_9PHAE (Protein farnesyltransferase subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNE5_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 1.490e-87
Identity = 132/173 (76.30%), Postives = 136/173 (78.61%), Query Frame = 0
Query:    1 MCELNFLPLRPGALEDEELAEFTDQGIVNAAGE----------------------------AVLMRAKHVKYLMRGLSGLGPGFISLDASRPWMVYWILHSLDLLDHFPQQEMTERVLQTVLSCQDTINGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIERYVCHACF 145
            MCELNFLPLRPGALEDEELAEFTDQGI+NAAGE                            AVLMR KH  YLMRGLSGLGPGFISLDASRPWMVYWILHSLDLLDHFPQQEMT R+L+TVLSCQDTINGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIER   +  F
Sbjct:    1 MCELNFLPLRPGALEDEELAEFTDQGIINAAGEDRTMQASSHLPENPATVTDAAADVFGGVAVLMRTKHEVYLMRGLSGLGPGFISLDASRPWMVYWILHSLDLLDHFPQQEMTRRILRTVLSCQDTINGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIERSALYRLF 173          
BLAST of mRNA_E-fasciculatus_F_contig10686.544.1 vs. uniprot
Match: A0A836CMB6_9STRA (Protein farnesyltransferase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMB6_9STRA)

HSP 1 Score: 158 bits (400), Expect = 4.110e-43
Identity = 74/144 (51.39%), Postives = 101/144 (70.14%), Query Frame = 0
Query:    2 CELNFLPLRPGALEDEELAEFTDQGIVNAAGEAVLMRAKHVKYLMRGLSGLGPGFISLDASRPWMVYWILHSLDLLDHFPQQEMTERVLQTVLSCQDTINGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIERYVCHACF 145
            C ++ LPL    L D+E+ EF ++GI+N +G+ VLMRAKH+ YL +GL  L  GF++LDASRPW++YWI HSLDLL+     +    ++ T+ SCQ    GGFGGGPQQL HCAP YA+VL+LL+LGT  AY+ ++R   +  F
Sbjct:   30 CTVSMLPLHMDDLSDQEVLEFQNRGILNESGDIVLMRAKHIAYLRKGLKVLPAGFVALDASRPWIIYWITHSLDLLNALRSDD-DAAIIATLASCQQPT-GGFGGGPQQLAHCAPTYAAVLTLLLLGTEAAYSAVDRSALYRFF 171          
BLAST of mRNA_E-fasciculatus_F_contig10686.544.1 vs. uniprot
Match: K8YQG9_NANGC (Protein farnesyltransferase subunit beta (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YQG9_NANGC)

HSP 1 Score: 138 bits (348), Expect = 1.170e-38
Identity = 69/139 (49.64%), Postives = 91/139 (65.47%), Query Frame = 0
Query:   14 LEDEELAEFTDQGIVNAAGEAVLMRAKHVKYLMRGLSGLGPGFISLDASRPWMVYWILHSLDLLDHFPQQ-------EMTERVLQTVLSCQDTINGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIERYVCHACF 145
            L+     +    G+ N +G+  L+R +HV YLM+GL+ LGPGFI LDASRPW+ YWILHSLDLL     +       ++  +V  T+ SCQ++  GGFGGGP Q+ HCAP YA+VL+LLILGT EAY  I+R   +  F
Sbjct:   25 LDQSSRGKLQASGLFNDSGDIRLLRERHVAYLMKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNS-GGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWF 162          
BLAST of mRNA_E-fasciculatus_F_contig10686.544.1 vs. uniprot
Match: D0NST4_PHYIT (Protein farnesyltransferase subunit beta n=20 Tax=Phytophthora TaxID=4783 RepID=D0NST4_PHYIT)

HSP 1 Score: 140 bits (352), Expect = 7.200e-37
Identity = 73/145 (50.34%), Postives = 98/145 (67.59%), Query Frame = 0
Query:    2 CELNFLPLRPGALEDEELAEFTDQGIVNAAGEAVLMRAKHVKYLMRGLSGLGPGFISLDASRPWMVYWILHSLDLLDHFPQQEMTERVLQTVLSC-QDTINGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIERYVCHACF 145
            C L F PL P    D++L +     +VN   E +LMR KHVKYL RGL+ L  GF+SLDASRPW++YW+LH+LDLL   P++E T+RV+ T+  C  D ++GGFGGG +QL H A  YAS L+L +LGTPEA   ++R+  +  F
Sbjct:   35 CSLFFFPL-PELPLDQQL-QLQQLSLVNTDLEPLLMREKHVKYLKRGLTRLPAGFVSLDASRPWIIYWVLHALDLLGALPEEE-TDRVIGTLKHCWNDDLDGGFGGGQKQLGHTATTYASCLTLALLGTPEALDTVDRHKLYRFF 176          
BLAST of mRNA_E-fasciculatus_F_contig10686.544.1 vs. uniprot
Match: W7TZN2_9STRA (Protein farnesyltransferase subunit beta n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZN2_9STRA)

HSP 1 Score: 138 bits (348), Expect = 9.350e-36
Identity = 69/139 (49.64%), Postives = 91/139 (65.47%), Query Frame = 0
Query:   14 LEDEELAEFTDQGIVNAAGEAVLMRAKHVKYLMRGLSGLGPGFISLDASRPWMVYWILHSLDLLDHFPQQ-------EMTERVLQTVLSCQDTINGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIERYVCHACF 145
            L+     +    G+ N +G+  L+R +HV YLM+GL+ LGPGFI LDASRPW+ YWILHSLDLL     +       ++  +V  T+ SCQ++  GGFGGGP Q+ HCAP YA+VL+LLILGT EAY  I+R   +  F
Sbjct:   41 LDQSSRGKLQASGLFNDSGDIRLLRERHVAYLMKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNS-GGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWF 178          
BLAST of mRNA_E-fasciculatus_F_contig10686.544.1 vs. uniprot
Match: A0A0N7L712_PLAHL (Protein farnesyltransferase subunit beta n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L712_PLAHL)

HSP 1 Score: 136 bits (343), Expect = 1.560e-35
Identity = 74/145 (51.03%), Postives = 94/145 (64.83%), Query Frame = 0
Query:    2 CELNFLPLRPGALEDEELAEFTDQGIVNAAGEAVLMRAKHVKYLMRGLSGLGPGFISLDASRPWMVYWILHSLDLLDHFPQQEMTERVLQTVLSC-QDTINGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIERYVCHACF 145
            C L F PL P    D++L E      VN   E +LMR KHV YL RGL+ L  GF++LDASRPW++YWILH+L+LLD  P  EMTERV+ T+  C  D  +GGFGGGP+QL H A  YAS L+L +LGT +A   ++R   +  F
Sbjct:   35 CSLFFFPL-PELPLDQQL-ELQQLNFVNTDLEPLLMREKHVAYLKRGLTRLSAGFVTLDASRPWIIYWILHALELLDALPD-EMTERVIGTLKPCWNDDHDGGFGGGPKQLGHTATNYASCLTLALLGTLDALESVDRLSLYRFF 176          
BLAST of mRNA_E-fasciculatus_F_contig10686.544.1 vs. uniprot
Match: A0A3R7H5E8_9STRA (Protein farnesyltransferase subunit beta n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H5E8_9STRA)

HSP 1 Score: 134 bits (338), Expect = 8.110e-35
Identity = 71/145 (48.97%), Postives = 94/145 (64.83%), Query Frame = 0
Query:    2 CELNFLPLRPGALEDEELAEFTDQGIVNAAGEAVLMRAKHVKYLMRGLSGLGPGFISLDASRPWMVYWILHSLDLLDHFPQQEMTERVLQTVLSC-QDTINGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIERYVCHACF 145
            C L F PL P    D++L +      +N   E +LMR KHV +L RGL+ L  GF++LDASRPW+VYWILH+L+LLD  P+ E T R + T+ +C  D  +GGFGGGP+QL H A  YAS L+L +LGTPEA   ++R   +  F
Sbjct:   36 CSLFFYPL-PDLPLDQQL-QLQQLSFINTDLEPLLMRQKHVDFLSRGLTRLSSGFVALDASRPWIVYWILHALELLDALPK-EQTARAIATLKTCWNDDHDGGFGGGPKQLGHTATNYASCLTLALLGTPEALETVDRQALYRFF 177          
BLAST of mRNA_E-fasciculatus_F_contig10686.544.1 vs. uniprot
Match: G4Z7G8_PHYSP (Protein farnesyltransferase subunit beta n=6 Tax=Phytophthora TaxID=4783 RepID=G4Z7G8_PHYSP)

HSP 1 Score: 134 bits (336), Expect = 1.590e-34
Identity = 69/145 (47.59%), Postives = 91/145 (62.76%), Query Frame = 0
Query:    2 CELNFLPLRPGALEDEELAEFTDQGIVNAAGEAVLMRAKHVKYLMRGLSGLGPGFISLDASRPWMVYWILHSLDLLDHFPQQEMTERVLQTVLSC-QDTINGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIERYVCHACF 145
            C L F PL    LE +   +      VN   E +LMR KH+ YL RGL+ L  GF++LDASRPW++YWILH+L+LLD   ++E+ ER + T+  C  D   GGFGGGP+QL H A  YAS L+L +LGTPEA   ++R   +  F
Sbjct:   36 CSLFFFPLPELPLEQQ--LQLQQLSFVNTDLEPLLMREKHIAYLKRGLTRLSAGFVALDASRPWIIYWILHALELLDALLEEEI-ERAIATLKMCWNDERGGGFGGGPKQLGHAATTYASCLTLALLGTPEALETVDRQALYQFF 177          
BLAST of mRNA_E-fasciculatus_F_contig10686.544.1 vs. uniprot
Match: A0A3M6VTJ6_9STRA (Protein farnesyltransferase subunit beta n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VTJ6_9STRA)

HSP 1 Score: 132 bits (333), Expect = 3.700e-34
Identity = 68/138 (49.28%), Postives = 91/138 (65.94%), Query Frame = 0
Query:    2 CELNFLPLRPGALEDEELAEFTDQGIVNAAGEAVLMRAKHVKYLMRGLSGLGPGFISLDASRPWMVYWILHSLDLLDHFPQQEMTERVLQTVLSCQDTIN-GGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIER 138
            C L F PL    L  +   +      +N   E +LMR KHV+YL RGL+ L  GF++LDASRPW++YWILH+LDLLD  P++E T RV+ T+    +  + GGFGGGP+QL H A  YAS L+L +LGTPEA+  ++R
Sbjct:   26 CSLFFFPLLELPLNQQ--LQLQQLSFINTDLEPLLMREKHVEYLKRGLTRLSSGFVALDASRPWIIYWILHALDLLDALPEEE-TARVIDTLKPFWNNDHEGGFGGGPKQLGHTATNYASCLTLALLGTPEAWEAVDR 160          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10686.544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXI8_ECTSI4.720e-8991.03Protein farnesyltransferase subunit beta n=1 Tax=E... [more]
A0A6H5KNE5_9PHAE1.490e-8776.30Protein farnesyltransferase subunit beta n=1 Tax=E... [more]
A0A836CMB6_9STRA4.110e-4351.39Protein farnesyltransferase subunit beta n=1 Tax=T... [more]
K8YQG9_NANGC1.170e-3849.64Protein farnesyltransferase subunit beta (Fragment... [more]
D0NST4_PHYIT7.200e-3750.34Protein farnesyltransferase subunit beta n=20 Tax=... [more]
W7TZN2_9STRA9.350e-3649.64Protein farnesyltransferase subunit beta n=2 Tax=N... [more]
A0A0N7L712_PLAHL1.560e-3551.03Protein farnesyltransferase subunit beta n=1 Tax=P... [more]
A0A3R7H5E8_9STRA8.110e-3548.97Protein farnesyltransferase subunit beta n=3 Tax=P... [more]
G4Z7G8_PHYSP1.590e-3447.59Protein farnesyltransferase subunit beta n=6 Tax=P... [more]
A0A3M6VTJ6_9STRA3.700e-3449.28Protein farnesyltransferase subunit beta n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.50.10.20coord: 14..146
e-value: 1.1E-35
score: 125.4
NoneNo IPR availablePANTHERPTHR11774GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNITcoord: 31..139
IPR026872Protein farnesyltransferase subunit betaPANTHERPTHR11774:SF6CHURC1-FNTB READTHROUGH-RELATEDcoord: 31..139
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidSUPERFAMILY48239Terpenoid cyclases/Protein prenyltransferasescoord: 30..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10686contigE-fasciculatus_F_contig10686:1078..4269 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10686.544.1mRNA_E-fasciculatus_F_contig10686.544.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10686 1063..4269 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10686.544.1 ID=prot_E-fasciculatus_F_contig10686.544.1|Name=mRNA_E-fasciculatus_F_contig10686.544.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=156bp
MCELNFLPLRPGALEDEELAEFTDQGIVNAAGEAVLMRAKHVKYLMRGLS
GLGPGFISLDASRPWMVYWILHSLDLLDHFPQQEMTERVLQTVLSCQDTI
NGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIERYVCHACFFFWGG
GSLVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008930Terpenoid_cyclase/PrenylTrfase
IPR026872FTB