mRNA_E-fasciculatus_F_contig10684.542.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10684.542.1 vs. uniprot
Match: A0A6H5KL98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL98_9PHAE) HSP 1 Score: 466 bits (1199), Expect = 2.720e-159 Identity = 356/424 (83.96%), Postives = 359/424 (84.67%), Query Frame = 1
Query: 1 MAPQPRAAQVSPPKPWDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYARPSSSVSGQPQQLGQQRGGLPVRAAGSATAVAAGNGVAAXGTRRLSSVXXXXXXXXXXXXSVASRGXXXXXXXXXXXXTAQQDVGAA-ATAAGATATNGGLANGTPTAPVVGQQLQQQGGYGTYGGVQSGYGSTAGSYGPANXXXXXXXXXXXXXXXSSYGSSYGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYGASRYGMGGMGGMGMGXXXMDQQYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQASLEDIYSLQQRGGVVGGNGRARTAAGAAD 1269
MAPQPRAAQVSPPK WDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RYAR SSV GQPQQL QQRGGLPVR AGSA AVAAG+GVAA G RLSSV VASRG TAQQDVGAA ATA GGLANGT TAPVVG Q QQQ G GTYGGVQSGYGSTAG+YGPA XXXXXXXXXXXXXXXSSYGSSYGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYGASRYGMGGMG X MD QYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFR SRALHRLISGRHRPRPAIAQASLEDIYSLQQRG V GGNG+ARTA GAAD
Sbjct: 1 MAPQPRAAQVSPPKSWDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----RYARSLSSVIGQPQQLAQQRGGLPVRTAGSAPAVAAGSGVAAGGMSRLSSVGGRPATTGGNVARVASRGPSGGEGAAAVVSTAQQDVGAAEATAXXXXXXXGGLANGTSTAPVVGHQQQQQAGNGTYGGVQSGYGSTAGNYGPAXXXXXXXXXXXXXXXXSSYGSSYGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYGASRYGMGGMGXXXX-XGGMDHQYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRASRALHRLISGRHRPRPAIAQASLEDIYSLQQRGRVGGGNGQARTAVGAAD 419
BLAST of mRNA_E-fasciculatus_F_contig10684.542.1 vs. uniprot
Match: D8LEW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW3_ECTSI) HSP 1 Score: 219 bits (559), Expect = 7.050e-67 Identity = 112/115 (97.39%), Postives = 112/115 (97.39%), Query Frame = 1
Query: 925 ANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQASLEDIYSLQQRGGVVGGNGRARTAAGAAD 1269
ANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQASLEDIYSLQQRGGV GGNGRA AAGAAD
Sbjct: 13 ANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQASLEDIYSLQQRGGVGGGNGRANAAAGAAD 127
BLAST of mRNA_E-fasciculatus_F_contig10684.542.1 vs. uniprot
Match: A0A836CLC2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLC2_9STRA) HSP 1 Score: 172 bits (435), Expect = 9.160e-48 Identity = 82/134 (61.19%), Postives = 106/134 (79.10%), Query Frame = 1
Query: 817 MDQQYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALH-----RLISGRHRPRPAIAQASLEDIYS 1203
M Q+SWLHSIQHFTSS+GYLTE+LGMNTQAIGF NLM F+E+ G +L S+QPWREFPPGHPRHGEPPPT EEERRR++R+RVLR+ +L++AYAGF++ R L R ++ R P +A+ ++E+I+S
Sbjct: 61 MGPQFSWLHSIQHFTSSMGYLTELLGMNTQAIGFFVGNLMSFIENAGLALASLQPWREFPPGHPRHGEPPPTAEEERRRVTRVRVLRWVASLLIAYAGFKLLRLLRGAPQRRALTHRAAPTRMLAETAMENIFS 194
BLAST of mRNA_E-fasciculatus_F_contig10684.542.1 vs. uniprot
Match: D8LEW2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW2_ECTSI) HSP 1 Score: 132 bits (331), Expect = 2.620e-32 Identity = 114/139 (82.01%), Postives = 115/139 (82.73%), Query Frame = 1
Query: 520 GYGTYGGVQSGYGSTAGSYGPANXXXXXXXXXXXXXXXSSYGSSYGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXM---YGASRYGMGGMGGMG-MGXXXMDQQYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVF 924
GYGTYGGVQSGYGSTAGSYGPANXXXXXXXXXXXXXXXSSYGSSYGAGG XXXXXXXXXXX XXXXXX YGASRYG GGMG MG MDQQYSWLHSIQHF+SSLGYLTEMLGMNTQAIGFVF
Sbjct: 98 GYGTYGGVQSGYGSTAGSYGPANXXXXXXXXXXXXXXXSSYGSSYGAGGYXXXXXXXXXXXGYGGGMSSMYGXXXXXXXXXXYGASRYGTGGMGXXXXMGG--MDQQYSWLHSIQHFSSSLGYLTEMLGMNTQAIGFVF 234
BLAST of mRNA_E-fasciculatus_F_contig10684.542.1 vs. uniprot
Match: A0A7S2UWF4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWF4_9STRA) HSP 1 Score: 108 bits (269), Expect = 3.970e-24 Identity = 58/117 (49.57%), Postives = 77/117 (65.81%), Query Frame = 1
Query: 838 LHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQPWR-EFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRA---LHRLISGRHRPRPAIA 1176
LH SLG LTE+LGMNT A+G + ++ +G LE + + ++ +QPW+ +FPPGHPRHGEP PTPEEERRR+ RLRVLRF AY ++ + L RL+ G R PA+A
Sbjct: 5 LHGFHQAIMSLGQLTELLGMNTHALGQLGSSCLGILEAVSSFISHLQPWQPDFPPGHPRHGEPQPTPEEERRRIHRLRVLRFFTACFAAYLAYKYAHRWSWLRRLL-GLRRQLPALA 120
BLAST of mRNA_E-fasciculatus_F_contig10684.542.1 vs. uniprot
Match: A0A484EDV4_BRELC (Peroxin-13 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDV4_BRELC) HSP 1 Score: 92.0 bits (227), Expect = 4.230e-17 Identity = 60/157 (38.22%), Postives = 88/157 (56.05%), Query Frame = 1
Query: 766 SRYGMGGMGGMGMGXXXMDQQYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHI----GNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQAS---LEDIYSLQQR 1215
SR GMGGM G G WL +I SS+G +TE+LGMN +A+ F + + F+E I T + P FPPGHPRHGEPP + EEE+ R R+R+ +F +++ + A ++ R + RL S R RP+ +A ++ D+ S+ QR
Sbjct: 151 SRLGMGGMMG-GASGDLNSGSLGWLSNINQMVSSIGQITELLGMNAEALNFCITSFIHFIERIRAMCAGIATMLAPRPVFPPGHPRHGEPPISEEEEKIRRRRVRIFQFMVSMFLLTALYKGVRWITRL-SIRTRPKMLVAPSTDVMTCDLESIFQR 305
BLAST of mRNA_E-fasciculatus_F_contig10684.542.1 vs. uniprot
Match: A0A8K1CKF5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKF5_PYTOL) HSP 1 Score: 91.3 bits (225), Expect = 6.710e-17 Identity = 60/150 (40.00%), Postives = 78/150 (52.00%), Query Frame = 1
Query: 781 GGMGGMGM-GXXXMDQQYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSI----QPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPR-----PAIAQASLEDIY 1200
GGM G GM G + WL S SS+G +T+MLGMN A+ F + + F E IG I P +FPPGHPRHGE T EEE+ R+ R+R+ +F L+L A ++ +R L L R RP PA SLE I+
Sbjct: 140 GGMMGGGMNGMMDPNGHMGWLTSFNQMVSSIGQITDMLGMNADALHFCITSFVNFFERIGGMFAGIAAMLSPRPQFPPGHPRHGEAQLTEEEEKSRVRRVRIFQFMLSLAAMGAMYKFARWLASL--RRQRPALLAAAPAATARSLESIF 287
BLAST of mRNA_E-fasciculatus_F_contig10684.542.1 vs. uniprot
Match: A0A6A3UN19_9STRA (Peroxin-13 n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UN19_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 8.040e-17 Identity = 56/134 (41.79%), Postives = 73/134 (54.48%), Query Frame = 1
Query: 766 SRYGMGGMGGMGMGXXXMDQQ---YSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQ----PWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLIS 1146
SR G G M G GM MD WL S SS+G +TE+LGMN +A+ F + + FLE IG I P FPPGHPRHGEPP T EEE+ R+ R+R+ +F +++ ++ R L RL S
Sbjct: 159 SRMGYGXMMGGGM----MDPNGGGLGWLSSFNQIVSSIGQITELLGMNAEALNFCIGSFVHFLERIGAMCAGIAAMLAPRPVFPPGHPRHGEPPATEEEEKSRVRRVRIFQFMVSMAALACAYKGLRWLTRLRS 288
BLAST of mRNA_E-fasciculatus_F_contig10684.542.1 vs. uniprot
Match: A0A1V9Z127_9STRA (Peroxin-13 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z127_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.210e-16 Identity = 48/127 (37.80%), Postives = 78/127 (61.42%), Query Frame = 1
Query: 835 WLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTS----IQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQASLEDIYS 1203
WL+S S++G +T++LGMN +A+ F F N + F+E + TS + P FPPGHPR+GEPP T EE + RL R++V++F ++L++ Y ++ + L R++ R R P + L+ IY+
Sbjct: 155 WLNSFNQTVSAVGQITQLLGMNAEALNFCFGNFVHFMERMAFMCTSAVAMLSPKPVFPPGHPRYGEPPETEEEIKSRLRRVKVVKFVVSLLIIYVASKLGQKL-RMLLWRTRKSPQ-KRLPLDSIYN 279
BLAST of mRNA_E-fasciculatus_F_contig10684.542.1 vs. uniprot
Match: A0A833WCQ5_PHYIN (Peroxin-13 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WCQ5_PHYIN) HSP 1 Score: 89.7 bits (221), Expect = 2.430e-16 Identity = 47/101 (46.53%), Postives = 62/101 (61.39%), Query Frame = 1
Query: 835 WLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQ----PWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALT---LVVAYAGFR 1116
WL+S SS+G +TE+LGMN +A+ F + + FLE IG I P FPPGHPRHGEPP T EEE+ RL R+R+++F ++ L V Y G R
Sbjct: 172 WLNSFNQIVSSIGQITELLGMNAEALNFCIGSFVHFLERIGAVCAGIAAMLAPRPTFPPGHPRHGEPPVTEEEEKSRLRRVRIVQFMVSMAALTVVYKGLR 272 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10684.542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10684.542.1 >prot_E-fasciculatus_F_contig10684.542.1 ID=prot_E-fasciculatus_F_contig10684.542.1|Name=mRNA_E-fasciculatus_F_contig10684.542.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=423bp MAPQPRAAQVSPPKPWDQQQQQQQPPGGALGSHSSAAGPTTLVSGAGGGGback to top mRNA from alignment at E-fasciculatus_F_contig10684:3..3828- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10684.542.1 ID=mRNA_E-fasciculatus_F_contig10684.542.1|Name=mRNA_E-fasciculatus_F_contig10684.542.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3826bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10684:3..3828- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10684:3..3828- >mRNA_E-fasciculatus_F_contig10684.542.1 ID=mRNA_E-fasciculatus_F_contig10684.542.1|Name=mRNA_E-fasciculatus_F_contig10684.542.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2538bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10684:3..3828- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |