mRNA_E-fasciculatus_F_contig10681.541.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10681.541.1
Unique NamemRNA_E-fasciculatus_F_contig10681.541.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig10681.541.1 vs. uniprot
Match: D7FR76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR76_ECTSI)

HSP 1 Score: 392 bits (1008), Expect = 1.080e-130
Identity = 208/244 (85.25%), Postives = 214/244 (87.70%), Query Frame = 1 
Query:    1 DWTGTGALEMEELPKILAEFDVEYDEKRLPDVFAIYDVDDSGALDFEEFSALLKDLNADKAVARKKMDAYRLPPALLKEFSPEAIEEMRVTFALFDESGDGALDEEELGALLRTFGQEPTKDKIHKEMLEIDYDRSGTIEFKEFVTLMKKVRDGEVELDDSAFGRAIMNSAVASRLSEELRRLDASPIPCLQSAKLIKSSPATLRATIDCPTGTPYEGYTMTMELVASDGYPFKPPVAKFLNRV 732
            D  G+GALE EELPKILAEFDVEYDEKRLPD+                    LKD+NADKAVA KKM+AYRLPPALLKEFSPEAIEEMRVTFALFDESGDGALDEEELGALLRTFGQEPTKDKIHKEMLEIDYDRSGTIEFKEFVTLMKKVRDGEVELDDSAFGRAIMNS VASRLSEELRRLDA+PIPCLQSAKLIKSSPATLRA I CPTGTPYEG T+TMELVASDGYPF PPVAKFL RV
Sbjct:  160 DTDGSGALETEELPKILAEFDVEYDEKRLPDMXXXXXXXXXXXXXXXXXXXXLKDMNADKAVAEKKMNAYRLPPALLKEFSPEAIEEMRVTFALFDESGDGALDEEELGALLRTFGQEPTKDKIHKEMLEIDYDRSGTIEFKEFVTLMKKVRDGEVELDDSAFGRAIMNSTVASRLSEELRRLDANPIPCLQSAKLIKSSPATLRAKIACPTGTPYEGCTLTMELVASDGYPFMPPVAKFLKRV 403
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BLAST of mRNA_E-fasciculatus_F_contig10681.541.1 vs. uniprot
Match: A0A6H5JFC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC4_9PHAE)

HSP 1 Score: 358 bits (919), Expect = 1.170e-116
Identity = 184/196 (93.88%), Postives = 190/196 (96.94%), Query Frame = 1 
Query:    1 DWTGTGALEMEELPKILAEFDVEYDEKRLPDVFAIYDVDDSGALDFEEFSALLKDLNADKAVARKKMDAYRLPPALLKEFSPEAIEEMRVTFALFDESGDGALDEEELGALLRTFGQEPTKDKIHKEMLEIDYDRSGTIEFKEFVTLMKKVRDGEVELDDSAFGRAIMNSAVASRLSEELRRLDASPIPCLQSAKL 588
            DWTGTGALEMEELPKILAEFDVEYDEKRLPD+FAIYDVDDSGALDFEEFSALLKD+ AD AVA KKM+AYRLPP LLKEFSPEAIEEMRVTFA FDESGDGALDEEELGALLRTFGQEPTKDKIHKEMLE+DYDRSGTIEFKEFVTLMKKVRDGEVELDDSAFGRAIMNS VASRLSEELRRLDA+PIPCLQSAK+
Sbjct:  231 DWTGTGALEMEELPKILAEFDVEYDEKRLPDMFAIYDVDDSGALDFEEFSALLKDMKADNAVAEKKMNAYRLPPTLLKEFSPEAIEEMRVTFARFDESGDGALDEEELGALLRTFGQEPTKDKIHKEMLEVDYDRSGTIEFKEFVTLMKKVRDGEVELDDSAFGRAIMNSTVASRLSEELRRLDANPIPCLQSAKV 426
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BLAST of mRNA_E-fasciculatus_F_contig10681.541.1 vs. uniprot
Match: A0A7S2V047_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V047_9STRA)

HSP 1 Score: 155 bits (392), Expect = 6.100e-42
Identity = 91/244 (37.30%), Postives = 136/244 (55.74%), Query Frame = 1 
Query:    1 DWTGTGALEMEELPKILAEFDVEYDEKRLPDVFAIYDVDDSGALDFEEFSALLKDLNADKAVARKKMDAYRLPPALLKEFSPEAIEEMRVTFALFDESGDGALDEEELGALLRTFGQEPTKDKIHKEMLEIDYDRSGTIEFKEFVTLMKKVRDGEVELDDSAFGRAIMNSAVASRLSEELRRLDASPIPCLQSAKLIKSSPATLRATIDCPTGTPYEGYTMTMELVASDGYPFKPPVAKFLNRV 732
            D  G+G+++ +E+P ILAE  VE   + L +                       DL+A  A+ +++  +Y LP  L   FSPE + E++  F +FD++GDG +D  EL  +L   GQE   D +   + E+DYD+SG IEF EFV+LMKKV+DG VEL  SA  +A+M+S  A +L  E+  L+  P+P   S ++ + +P      I  P GTPYE   + +E+   DGYP+ PP  +F +RV
Sbjct:   65 DADGSGSIDRDEVPAILAEHGVEVASQELEEXXXXXXXXXXXXXXXXXXXXXXADLDALNAITQQRQASYELPKDLEVHFSPEELLELKFNFGVFDDNGDGNVDASELMQVLENLGQECDPDSVEDLINEVDYDKSGAIEFVEFVSLMKKVKDGTVELGTSALLQAVMDSTPAIQLKNEVVALEEDPVPGC-SIEIPRRTPTVGVVDIQGPEGTPYERGVLQLEVKIPDGYPYHPPAVRFTHRV 307
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BLAST of mRNA_E-fasciculatus_F_contig10681.541.1 vs. uniprot
Match: A0A7S3UQR6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UQR6_HETAK)

HSP 1 Score: 138 bits (348), Expect = 2.150e-37
Identity = 72/156 (46.15%), Postives = 100/156 (64.10%), Query Frame = 1 
Query:   97 FAIYDVDDSGALDFEEFSALLKDLNADKAVARKKMDAYRLPPALLKEFSPEAIEEMRVTFALFDESGDGALDEEELGALLRTFGQEPTKDKIHKEMLEIDYDRSGTIEFKEFVTLMKKVRDGEVELDDSAFGRAIMNSAVASRLSEELRRLDASPI 564
            F  YD D SG LD EEFS +LKD+     +A K+  +Y LPP L   F+ E IE+ +  F +FD +GDG +DEEEL  +L+  G +   + I   + EIDYD+SG +EF EFVTLM+ VRDG+V+L  S F +A++NS  A  L  E+  L+A+P+
Sbjct:    6 FERYDADGSGTLDLEEFSVMLKDMKVAAELAMKREASYDLPPGLASAFTEEEIEDFKFNFGMFDANGDGDIDEEELLTVLQNMGTDCDPESIGDIIAEIDYDKSGKVEFVEFVTLMRDVRDGKVDLGSSLFAQAVVNSRPAKLLKAEVAALEAAPL 161
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BLAST of mRNA_E-fasciculatus_F_contig10681.541.1 vs. uniprot
Match: A0A7S2RJ77_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJ77_9STRA)

HSP 1 Score: 114 bits (286), Expect = 4.310e-27
Identity = 61/176 (34.66%), Postives = 102/176 (57.95%), Query Frame = 1 
Query:  205 AYRLPPALLKEFSPEAIEEMRVTFALFDESGDGALDEEELGALLRTFGQEPTKDKIHKEMLEIDYDRSGTIEFKEFVTLMKKVRDGEVELDDSAFGRAIMNSAVASRLSEELRRLDASPIPCLQSAKLIKSSPATLRATIDCPTGTPYEGYTMTMELVASDGYPFKPPVAKFLNRV 732
            +Y +P AL   F+   + ++ V F +FD  G G++  +EL  +L+  G + T +++ + + EID D+SG IEF EFV LM KV  G++E+  S   +A+M+S    +L+ E+  +  +PIP +    + K  P T+   ID P  TPY  Y + +++V +D YP+ PP   F +R+
Sbjct:    1 SYEVPAALKIHFTEAELNDLLVHFGMFDIDGGGSIAADELKQVLQDMGIDATDEQVEEVIAEIDKDKSGEIEFGEFVALMHKVNTGQLEIGASLLAQAVMDSTAGKKLAVEMAEVKENPIPGVTFI-IDKRDPTTVVFDIDGPPDTPYHQYVLHLQVVVTDEYPYSPPQTFFTHRL 175
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BLAST of mRNA_E-fasciculatus_F_contig10681.541.1 vs. uniprot
Match: A0A7S2B7D0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B7D0_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 4.040e-17
Identity = 46/115 (40.00%), Postives = 67/115 (58.26%), Query Frame = 1 
Query:  388 EIDYDRSGTIEFKEFVTLMKKVRDGEVELDDSAFGRAIMNSAVASRLSEELRRLDASPIPCLQSAKLIKSSPATLRATIDCPTGTPYEGYTMTMELVASDGYPFKPPVAKFLNRV 732
            ++D D+SG IEF EF T+M KV  GE+E+  S   +A+M+SA A RL++E+  L   PI  ++  +L+K         I+ P+GTPY      + +   D YPF PP A F +RV
Sbjct:    1 QVDKDQSGEIEFAEFATMMHKVNTGEIEVGGSLLAQAVMDSAAARRLAQEVTALGKDPIEGVR-IELMKREADCAECLIEGPSGTPYADRLYRLRVKVGDDYPFAPPKAFFSHRV 114
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BLAST of mRNA_E-fasciculatus_F_contig10681.541.1 vs. uniprot
Match: G4ZPB9_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZPB9_PHYSP)

HSP 1 Score: 81.3 bits (199), Expect = 2.240e-14
Identity = 54/174 (31.03%), Postives = 89/174 (51.15%), Query Frame = 1 
Query:  214 LPPALLKEFSPEAIEEMRVTFALFDESGDGALDEEELGALLRTFGQEPTKDKIHKEMLEIDYDRSGTIEFKEFVTLMKKVRDGEVELDDSAFGRAIMNSAVASRLSEELRRLDASPIPCLQSAK-LIKSSPATLRATIDCPTGTPYEGYTMTMELVASDGYPFKPPVAKFLNRV 732
            LP +L  EFS E +E+M+  F+ FD SGDG++   EL  L+ + G   T +++ + + ++D +RSG +E+ EFV L+  +R G    +       +  S     +  EL  LD S  P   S   ++K +    +  ++ P G+PYEG  +   +  S  YPF+ PV   L  +
Sbjct:   17 LPESLKHEFSREELEQMKQQFSDFDTSGDGSIAASELTVLMESMGISATLEEVQELIDKVDENRSGELEYHEFVRLVSDIRRG----NGDKLAMFLQYSKHVMAIRREL--LDLSTHPTANSQVFIVKENAWDWKVLMNGPVGSPYEGGVLNFHVRFSHEYPFEAPVLSCLTHI 184
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BLAST of mRNA_E-fasciculatus_F_contig10681.541.1 vs. uniprot
Match: D0MRM4_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MRM4_PHYIT)

HSP 1 Score: 79.0 bits (193), Expect = 1.530e-13
Identity = 54/173 (31.21%), Postives = 86/173 (49.71%), Query Frame = 1 
Query:  214 LPPALLKEFSPEAIEEMRVTFALFDESGDGALDEEELGALLRTFGQEPTKDKIHKEMLEIDYDRSGTIEFKEFVTLMKKVRDGEVELDDSAFGRAIMNSAVASRLSEELRRLDASPIPCLQSAKLIKSSPATLRATIDCPTGTPYEGYTMTMELVASDGYPFKPPVAKFLNRV 732
            LP ++  EFS E +E+M+  F  FD SGDG++   EL  L+ + G   T +++   + ++D +RSG +E+ EFV L+  +R G    D +     +  S     +  EL  L+  P P  Q    +K +    +  I   +G+PYEG      +     YPF+PPV   L R+
Sbjct:   17 LPESVKHEFSMEELEQMKQQFTDFDTSGDGSIAASELIVLMESMGIITTLEEVQGLIDKVDENRSGELEYPEFVRLVSDIRRG----DGNKLAIFLQYSKHVMAIRRELLDLNTQPTPNSQVFG-VKENAWEWKVLIRGSSGSPYEGGVFKFSVRFGHEYPFEPPVFSCLTRI 184
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BLAST of mRNA_E-fasciculatus_F_contig10681.541.1 vs. uniprot
Match: D0NZC9_PHYIT (Ubiquitin-conjugating enzyme E2, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NZC9_PHYIT)

HSP 1 Score: 75.1 bits (183), Expect = 7.250e-13
Identity = 55/174 (31.61%), Postives = 86/174 (49.43%), Query Frame = 1 
Query:  214 LPPALLKEFSPEAIEEMRVTFALFDESGDGALDEEELGALLRTFGQEPTKDKIHKEMLE-IDYDRSGTIEFKEFVTLMKKVRDGEVELDDSAFGRAIMNSAVASRLSEELRRLDASPIPCLQSAKLIKSSPATLRATIDCPTGTPYEGYTMTMELVASDGYPFKPPVAKFLNRV 732
            LP ++  EFS E +E+M+  F  FD SGDG++   EL  L+ + G   T   + + +++ +D +RSG +E+ EFV L+  +R G    D +     +  S     +  EL  L+  P P  Q    +K      +  I  P+G+PYEG      +     YPF+PPV   L R+
Sbjct:   17 LPESVKHEFSMEELEQMKQQFTDFDTSGDGSIAASELIVLMESMGIITT---LEEGLIDKVDENRSGELEYPEFVRLVSDIRRG----DGNKLAIFLQYSKHEMAIRRELLDLNTQPTPNSQVFG-VKEYAWEWKVLIRGPSGSPYEGGVFNFSVRFGHEYPFEPPVFSCLTRI 182
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BLAST of mRNA_E-fasciculatus_F_contig10681.541.1 vs. uniprot
Match: V9FNN0_PHYPR (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=V9FNN0_PHYPR)

HSP 1 Score: 76.3 bits (186), Expect = 1.390e-12
Identity = 53/174 (30.46%), Postives = 86/174 (49.43%), Query Frame = 1 
Query:  214 LPPALLKEFSPEAIEEMRVTFALFDESGDGALDEEELGALLRTFGQEPTKDKIHKEMLEIDYDRSGTIEFKEFVTLMKKVRDGEVELDDSAFGRAIMNSAVASRLSEELRRLDASPIPCLQSAKL-IKSSPATLRATIDCPTGTPYEGYTMTMELVASDGYPFKPPVAKFLNRV 732
            LP +L  EFS E +E+M+  F+ FD SGDG++   EL  L+ + G   T +++ + + ++D +RSG +E+ EFV L+  +R G    D       +  S     +  EL  +D +  P L S    IK +    +  I  P+ +PY G      +     YPF+PP+     R+
Sbjct:   17 LPESLKHEFSLEELEQMKQQFSDFDTSGDGSIAASELIVLMESMGITTTLEEVQELIDKVDENRSGELEYPEFVRLVSDIRRG----DGDKLAIFLQYSKHVMTIRREL--IDLNAHPTLNSRVFGIKENAWEWKVLIQGPSDSPYAGGVFNFNVRFGHEYPFEPPIFSCSTRI 184
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10681.541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR76_ECTSI1.080e-13085.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFC4_9PHAE1.170e-11693.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2V047_9STRA6.100e-4237.30Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3UQR6_HETAK2.150e-3746.15Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2RJ77_9STRA4.310e-2734.66Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2B7D0_9STRA4.040e-1740.00Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
G4ZPB9_PHYSP2.240e-1431.03Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
D0MRM4_PHYIT1.530e-1331.21Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
D0NZC9_PHYIT7.250e-1331.61Ubiquitin-conjugating enzyme E2, putative n=1 Tax=... [more]
V9FNN0_PHYPR1.390e-1230.46Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10681contigE-fasciculatus_F_contig10681:67..4225 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score387.5
Seed ortholog evalue4.6e-105
Seed eggNOG ortholog2880.D7FR76
KEGG koko:K10573,ko:K20217
KEGG Pathwayko04120,map04120
GOsGO:0000003,GO:0000151,GO:0000209,GO:0000228,GO:0000785,GO:0000790,GO:0000792,GO:0003006,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009791,GO:0009987,GO:0010228,GO:0010498,GO:0016043,GO:0016567,GO:0016569,GO:0016570,GO:0016574,GO:0016740,GO:0019538,GO:0019787,GO:0019899,GO:0019941,GO:0022414,GO:0030163,GO:0031371,GO:0031625,GO:0031974,GO:0031981,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0033503,GO:0033523,GO:0033554,GO:0034641,GO:0036211,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0046483,GO:0048608,GO:0048731,GO:0048856,GO:0050896,GO:0051276,GO:0051603,GO:0051716,GO:0061458,GO:0061630,GO:0061659,GO:0070013,GO:0070647,GO:0071704,GO:0071840,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1990234
EggNOG free text desc.protein modification by small protein conjugation
EggNOG OGsCOG5078@1,COG5126@1,KOG0027@2759,KOG0419@2759
Ec32 ortholog descriptionUbiquitin-conjugating enzyme E2
Ec32 orthologEc-08_005090.1
EC2.3.2.23
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400,ko04121
Hectar predicted targeting categoryother localisation
Exons5
Model size762
Cds size735
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10681.541.1prot_E-fasciculatus_F_contig10681.541.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10681 94..4225 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927566.5084143-UTR-E-fasciculatus_F_contig10681:66..931622927566.5084143-UTR-E-fasciculatus_F_contig10681:66..93Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10681 67..93 +
1695995599.1187956-UTR-E-fasciculatus_F_contig10681:66..931695995599.1187956-UTR-E-fasciculatus_F_contig10681:66..93Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10681 67..93 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927566.5197766-CDS-E-fasciculatus_F_contig10681:93..1851622927566.5197766-CDS-E-fasciculatus_F_contig10681:93..185Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10681 94..185 +
1695995599.1329968-CDS-E-fasciculatus_F_contig10681:93..1851695995599.1329968-CDS-E-fasciculatus_F_contig10681:93..185Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10681 94..185 +
1622927566.5316637-CDS-E-fasciculatus_F_contig10681:562..8121622927566.5316637-CDS-E-fasciculatus_F_contig10681:562..812Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10681 563..812 +
1695995599.1436813-CDS-E-fasciculatus_F_contig10681:562..8121695995599.1436813-CDS-E-fasciculatus_F_contig10681:562..812Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10681 563..812 +
1622927566.5469627-CDS-E-fasciculatus_F_contig10681:2265..23461622927566.5469627-CDS-E-fasciculatus_F_contig10681:2265..2346Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10681 2266..2346 +
1695995599.1536427-CDS-E-fasciculatus_F_contig10681:2265..23461695995599.1536427-CDS-E-fasciculatus_F_contig10681:2265..2346Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10681 2266..2346 +
1622927566.5586467-CDS-E-fasciculatus_F_contig10681:3116..32511622927566.5586467-CDS-E-fasciculatus_F_contig10681:3116..3251Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10681 3117..3251 +
1695995599.1633697-CDS-E-fasciculatus_F_contig10681:3116..32511695995599.1633697-CDS-E-fasciculatus_F_contig10681:3116..3251Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10681 3117..3251 +
1622927566.568396-CDS-E-fasciculatus_F_contig10681:4048..42251622927566.568396-CDS-E-fasciculatus_F_contig10681:4048..4225Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10681 4049..4225 +
1695995599.173028-CDS-E-fasciculatus_F_contig10681:4048..42251695995599.173028-CDS-E-fasciculatus_F_contig10681:4048..4225Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10681 4049..4225 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10681.541.1

>prot_E-fasciculatus_F_contig10681.541.1 ID=prot_E-fasciculatus_F_contig10681.541.1|Name=mRNA_E-fasciculatus_F_contig10681.541.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=245bp
MEELPKILAEFDVEYDEKRLPDVFAIYDVDDSGALDFEEFSALLKDLNAD
KAVARKKMDAYRLPPALLKEFSPEAIEEMRVTFALFDESGDGALDEEELG
ALLRTFGQEPTKDKIHKEMLEIDYDRSGTIEFKEFVTLMKKVRDGEVELD
DSAFGRAIMNSAVASRLSEELRRLDASPIPCLQSAKLIKSSPATLRATID
CPTGTPYEGYTMTMELVASDGYPFKPPVAKFLNRVSSSWPNGSC*
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mRNA from alignment at E-fasciculatus_F_contig10681:67..4225+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10681.541.1 ID=mRNA_E-fasciculatus_F_contig10681.541.1|Name=mRNA_E-fasciculatus_F_contig10681.541.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4159bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10681:67..4225+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GACTGGACCGGGACAGGAGCATTGGAGATGGAAGAACTGCCCAAGATCCT
TGCGGAGTTCGACGTCGAGTATGACGAGAAGCGCCTGCCAGACGTGTTCG
CCATCTACGACGTCGACGAGTGAGAAATTATCCCATATCTTTGACGCTGG
GGTAGGGTTTGAACCAGCTTCCCTTTGCCGGTGTTGGTGGGGGTAGTAGG
CGTATGCATAGGGGCGAGAGCAAGTAGAAGGCATCGTTGGTGATGGTGCT
GTTTCTCGGTAGTGGTGGTAGCGGTGAAGGTGGTAGGTTCCTTGGGTCTC
GAGGACTTTCGGGGCACCTTCTTGGTCGATATGGGTGCAAAACATTTGGA
TTCCCTTTGCTCTTTGTGCTTTTCGTTGGGGCTTGTCTAGGCTTGAGCTT
TCGTGCATCAGCTGGAAATTGCCGTGATCGTCCGTTACAATTCCAACATA
CACATCACGAACAACAAGGCCAAAGCAACGCGCTTCTTCCTCGCAGCTCT
GGCGCCCTGGACTTCGAGGAGTTCAGCGCCCTGCTGAAGGACCTGAACGC
CGACAAGGCGGTGGCAAGGAAGAAGATGGACGCCTACCGCCTGCCCCCGG
CCCTCCTGAAGGAGTTCAGCCCGGAGGCCATCGAGGAGATGAGGGTGACC
TTCGCCCTCTTCGACGAGTCCGGGGACGGCGCGCTCGACGAAGAGGAGCT
GGGAGCCCTGCTGAGGACTTTCGGGCAGGAACCCACGAAGGACAAGGTGC
TGAATACATATGAAGCAATACTACTATAGACGGGGGTCGTTGTGGGTTTG
TGGTGATCCTTGCGACTACGTCCTGTGGTTACCGTTCGAATCCACTTACT
TGAGCTCAGTACGGGTTCGGGCAAGACGAAGAGCTCGCAAAGAGCAAAAC
GATACGAAATGGCTGGTATCGCTACTTTCTCCCAAATTTTACGATGCCGA
CTCTGAAACGCGTGGTGTATGCCAGCAAGGGAACGTAGGCGTCTGTGGCA
GCAGGTGCGTTACGAATTAGGGCATAGGCAACGAGGAGTCAGGGCACGCC
TAGGAGCCGTCGGCAAGAACCCCACGAAGGAGGATCTTCGTTACAGTCAT
GTTAACGACGTAGGTATTCGTTGAACTTGCGGTACCCAGCAAGTGAGTCA
TTCGGAGGAAGATGATGGCATAGGTCATATCACCCGGCTGTGTGCGGCGC
CTCGGTTGAAGAGGGGTCGGAAGCCTTGCTAAGGACTGCGGGGAAGGAGC
ACTGTCGAGAATAAGGGCGGCACGCAATACGGACCGTTTTCAACAGGCCA
CATTGGTATACATCGCTTCCACTCATTCTCTAAACAGTTTCCATGTATCC
TGCAACGCTGGAACCCGGGTTTCGGCTCTGATAGTGCTCGGGAAGTTCTA
AGAAACGTGGAAGCTAGAAGGAGAACAGAAGGTCGGATGTCTTCCAGCTT
GTGGGGACTAATACTGCAAGTCGAGGATTGCACAATATATTGTTGGACAA
TTTGGAAAGGGAGCCGTGGACTACATAAAAACCGCGCTAAGCACGGGCAG
TGTTCCCATTCCCGCTCGCGTCGTGAACATGGAACACACGGAGGGGCTTA
CCAGAAAAAGCCACGTTGCGATTACTTGTGTGTTGCGATAGATTACTTGG
GGTGCTCGATCAGGATATTGAGACTAAGACGCCGAAAATTGCAAATAAGT
GTGCATGTGACTGAAGGAACAGCGACGTTCGAGTTTGATTCTGCCGTGGC
GTCTGTTTGGAATGATGGTGCTAGAAACGGAAGGCTGTGATGTTGGTCGC
AGTCCAAGTCCATCGAGCTGTGCACGGCATTTTAGGCGAAGAGCAAGAAG
AGCTGCCGGGGCTTTTCTTTTCAAATAGATTAGGTCATTCGTGTCAGCTT
GTGCTTGTCAATAATTCTTACTTCCCCCACGAATTTTTGGAGGGGGGCTT
CGGACGTTGTGACCGTGAAAACACCAACGCGGCCACCGTTTGCAACCGAA
ATCTCTTGTCAATCTTCCTTGTTTATGCCATCGTTGTTCCCGCCAAATCC
ACTCACTCCACAGGAAGGGAGTTGTCGTTACACCCCGGACGCGGAACGGA
CAGATCGGCCTTTTTGCTGCCACAGTTTTGTCCTCAACGATAGAGAACGA
CAGCTAACGCTCGATAGTACATTTTCTTCGCTCGTGTTCTTCTTGCCAGA
TCCACAAAGAGATGCTGGAGATAGACTACGACCGGTCTGGGACGATCGAG
TTCAAGGAGTTCGTCACCCTCATGAAGAAGGTAAGCTGAAAGAAACCGCT
CATGAGAGAATAAACTAAAGTGGACCTGCTTTCTCCAGACGAGATAGTTA
GCCTTTGCCATGGGGCTAGAATCTCCTCGAGCTGTTGAGTAGGGGAGCCA
ACGTGGCATCGTACGGCCTGGGTTGTGACCATTTTGGCCGCAAGCTCCTC
CGAGAAACAACCACACCAAGGGATGGCACTACGTCCCGGTGTTCCCAATA
ACCTCCACGGAAACCAAAGGAACTTACTCTGATCAAAACGTGATTTGCAA
CGAAACGCCTCTGTTCGTACATGTTGTCAATATCGAGGTAGCTAGAGCAA
ACGTTTCTAGCCGTTGTGTGCCGTACTATTTCGTGTTTTATCGACATGGG
TCGCAAGAAATGGGCATGCTTGGCAATCCACCATACAAGCCTTGAACAAG
ACATCACGTCGCGCTCGAATTGTTTCATAGAGGTCCTTCCTTCTGATTCT
GATATTTCTTGAGTCGTAAGATTAAGATTCCCGTTGTCGGAGGTCGGGGA
CGACGGGAAGTCGCCGTCACTTCCCCAGAAGTATCATATCGCCAGCACCA
TCATTCTTCCTGATGACACGCACCGACACGCCATCTTGTTGATACATCGA
CCAGTTTCCCCATGCTACAATAAATACCGGAAGGGTCAAGCATAGCAGCG
GTGGCACAACGTCTTACACTGCCAACAATGAAGACGCCGCGCCTTGGAAA
CTCTTTCGAACGCTCCTTCCTCGCTACCCGTCCCGTCTGTCTCCCCACAG
GTTCGGGACGGAGAGGTTGAGCTCGACGACAGCGCCTTCGGTCGAGCGAT
CATGAACTCGGCCGTGGCATCGCGCCTCAGCGAGGAGCTCCGCAGATTGG
ACGCCAGCCCCATCCCCTGCCTGCAATCGGCAAAGGTGCGCTTACATCAA
CATCGCTGCATGTAGCACTTGTGTTGCGTTGGTTCACGTATCGAGAGGTA
TGTATCTTGTGAAATCCCGTGGTAGCCGGACGATAGGCAACTTGGTGAGT
GTTTTGGGTTAAGGAAGTGTGACCGAGCTCTGCCACCAACAGGTTTTCAT
TCCCAACCGTTGCCGTGGCTCGCAATCCTACTTGGAACCAACGCGGGATT
CAAACGCGTTCCTGGACAACAAAACCTTGACGGGTCAAAGGCAGAAAACT
GCGCCGGAATCAAGAAAAGAAAAATGGGGCTCATGCTTTGACTGGTCCCA
CCCGCCTACGAACCACAACGACCAAGAAACACACAAGTTGTGGTTGCTTG
TTGTCCACAGAGAAGGAAGGGAGATGTTGCGAACATGAGCCTCGCTTGAA
AAATTACCGGTATGTCTCCTCTAGACTTTAAGGCGCTGGCCTCGCAGCCC
CGTGGGGTTTGTTGCCAAGCTCATGAAACTCGCTATGCAAAGAGTGTTCC
CATGGTTGTTCCCATGTCGGCCATACATCTAGCCCTCTACCGTAGATCTG
AACTTGTGTTGGTGCACGGCTCACCAACACCCCAAGCGCGATGGAATATT
GGTGTGGTAAAGGTGGGATCCGGTGGCTTTGCTCGGCGAGTCCCCCGACC
CCGGTGACCCCGTCAAGAGCAGCTTGATCTACACGTGTCCCTCCAACACC
TTAACCTCGCAACCCGTTTGTGTTTTGTGTGATCCGCGCTCCATGCCATG
CTTTCACGTACTCGCGTCAACGGAACAAAAAGCTGATCAAGTCCTCCCCG
GCGACCCTCCGAGCAACGATTGATTGTCCTACTGGGACTCCGTACGAGGG
GTACACGATGACGATGGAGCTCGTGGCGTCGGACGGCTACCCTTTCAAGC
CCCCCGTCGCTAAGTTCTTGAACAGGGTGAGCTCTTCATGGCCAAACGGG
TCTTGTTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10681:67..4225+

>mRNA_E-fasciculatus_F_contig10681.541.1 ID=mRNA_E-fasciculatus_F_contig10681.541.1|Name=mRNA_E-fasciculatus_F_contig10681.541.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1470bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10681:67..4225+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGAAGAACTGCCCAAGATCCTTGCGGAGTTCGACGTCGAGTATGACGA
GAAGCGCCTGCCAGACGTGTTCGCCATCTACGACGTCGACGAATGGAAGA
ACTGCCCAAGATCCTTGCGGAGTTCGACGTCGAGTATGACGAGAAGCGCC
TGCCAGACGTGTTCGCCATCTACGACGTCGACGACTCTGGCGCCCTGGAC
TTCGAGGAGTTCAGCGCCCTGCTGAAGGACCTGAACGCCGACAAGGCGGT
GGCAAGGAAGAAGATGGACGCCTACCGCCTGCCCCCGGCCCTCCTGAAGG
AGTTCAGCCCGGAGGCCATCGAGGAGATGAGGGTGACCTTCGCCCTCTTC
GACGAGTCCGGGGACGGCGCGCTCGACGAAGAGGAGCTGGGAGCCCTGCT
GAGGACTTTCGGGCAGGAACCCACGAAGGACAAGCTCTGGCGCCCTGGAC
TTCGAGGAGTTCAGCGCCCTGCTGAAGGACCTGAACGCCGACAAGGCGGT
GGCAAGGAAGAAGATGGACGCCTACCGCCTGCCCCCGGCCCTCCTGAAGG
AGTTCAGCCCGGAGGCCATCGAGGAGATGAGGGTGACCTTCGCCCTCTTC
GACGAGTCCGGGGACGGCGCGCTCGACGAAGAGGAGCTGGGAGCCCTGCT
GAGGACTTTCGGGCAGGAACCCACGAAGGACAAGATCCACAAAGAGATGC
TGGAGATAGACTACGACCGGTCTGGGACGATCGAGTTCAAGGAGTTCGTC
ACCCTCATGAAGAAGATCCACAAAGAGATGCTGGAGATAGACTACGACCG
GTCTGGGACGATCGAGTTCAAGGAGTTCGTCACCCTCATGAAGAAGGTTC
GGGACGGAGAGGTTGAGCTCGACGACAGCGCCTTCGGTCGAGCGATCATG
AACTCGGCCGTGGCATCGCGCCTCAGCGAGGAGCTCCGCAGATTGGACGC
CAGCCCCATCCCCTGCCTGCAATCGGCAAAGGTTCGGGACGGAGAGGTTG
AGCTCGACGACAGCGCCTTCGGTCGAGCGATCATGAACTCGGCCGTGGCA
TCGCGCCTCAGCGAGGAGCTCCGCAGATTGGACGCCAGCCCCATCCCCTG
CCTGCAATCGGCAAAGCTGATCAAGTCCTCCCCGGCGACCCTCCGAGCAA
CGATTGATTGTCCTACTGGGACTCCGTACGAGGGGTACACGATGACGATG
GAGCTCGTGGCGTCGGACGGCTACCCTTTCAAGCCCCCCGTCGCTAAGTT
CTTGAACAGGGTGAGCTCTTCATGGCCAAACGGGTCTTGTTGACTGATCA
AGTCCTCCCCGGCGACCCTCCGAGCAACGATTGATTGTCCTACTGGGACT
CCGTACGAGGGGTACACGATGACGATGGAGCTCGTGGCGTCGGACGGCTA
CCCTTTCAAGCCCCCCGTCGCTAAGTTCTTGAACAGGGTGAGCTCTTCAT
GGCCAAACGGGTCTTGTTGA
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