mRNA_E-fasciculatus_F_contig10675.536.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10675.536.1 vs. uniprot
Match: D7FX04_ECTSI (Dopamine beta-monooxygenase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX04_ECTSI) HSP 1 Score: 262 bits (669), Expect = 7.280e-76 Identity = 142/212 (66.98%), Postives = 156/212 (73.58%), Query Frame = 3
Query: 324 IDQPLRRVLPKRSNSDSGRLLERFHVCPLLFREKMGAASTFGRGYLPTSRPVYRYIFLCPGQAQNLVQSITGVCYFNMRAQEKALGVVQRSYNAYAVRVQDSSESPTSGAM-MGGLSQGSDKGPGTLKVVPAGETKEGVLCIEMRIRLYTDGAMSKLLESLAKIFGVSNENDHLHTSGDVCSQE*GRTRAFTFSDTDNPSVQLQGPFLIQKL 956
+D P R PKRSNS + RLLERFHVCPLLFRE+MGA S GRG LPT+RPVYRYIFLCPGQAQ L Q+ITGVCYFNMRAQEK GV+QRSYNAYAVRV+D++ +PT+G M MGGLS GSDKG GTL VVPA +T EGVLCIEMRIRLY DGAMSKLLE LAK DTDNP+VQLQGPF+IQKL
Sbjct: 693 VDGPRSRAPPKRSNSSNKRLLERFHVCPLLFRERMGATSAVGRGNLPTTRPVYRYIFLCPGQAQVLPQNITGVCYFNMRAQEKGNGVIQRSYNAYAVRVRDTNPTPTAGGMLMGGLSHGSDKGAGTLIVVPASQTTEGVLCIEMRIRLYHDGAMSKLLERLAK-------------------------------DTDNPAVQLQGPFVIQKL 873
BLAST of mRNA_E-fasciculatus_F_contig10675.536.1 vs. uniprot
Match: A0A6H5JBL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL8_9PHAE) HSP 1 Score: 250 bits (639), Expect = 1.810e-71 Identity = 138/212 (65.09%), Postives = 152/212 (71.70%), Query Frame = 3
Query: 324 IDQPLRRVLPKRSNSDSGRLLERFHVCPLLFREKMGAASTFGRGYLPTSRPVYRYIFLCPGQAQNLVQSITGVCYFNMRAQEKALGVVQRSYNAYAVRVQDSSESPTSGAM-MGGLSQGSDKGPGTLKVVPAGETKEGVLCIEMRIRLYTDGAMSKLLESLAKIFGVSNENDHLHTSGDVCSQE*GRTRAFTFSDTDNPSVQLQGPFLIQKL 956
++ P R PK SNS+ RLLERFHVCPLLFRE+MGA S GRG LPT+RPVYRYIFLCPGQAQ V +ITGVCYFNMRAQEK GV+QRSYNAYAVRV+D++ +P G M MGGLS G DKG GTLKVVPA +T EGVLCIEMRIRLY DGAMSKLLE LAK DTDNP+VQLQGPF+IQKL
Sbjct: 1385 VEGPRPRAPPKGSNSNDKRLLERFHVCPLLFRERMGATSAVGRGNLPTTRPVYRYIFLCPGQAQ--VLNITGVCYFNMRAQEKGKGVIQRSYNAYAVRVRDTNPTPAVGGMLMGGLSHGGDKGAGTLKVVPASQTTEGVLCIEMRIRLYHDGAMSKLLERLAK-------------------------------DTDNPAVQLQGPFVIQKL 1563
BLAST of mRNA_E-fasciculatus_F_contig10675.536.1 vs. uniprot
Match: D8LFE6_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE6_ECTSI) HSP 1 Score: 244 bits (622), Expect = 3.320e-69 Identity = 137/208 (65.87%), Postives = 147/208 (70.67%), Query Frame = 3
Query: 333 PLRRVLPKRSNSDSGRLLERFHVCPLLFREKMGAASTFGRGYLPTSRPVYRYIFLCPGQAQNLVQSITGVCYFNMRAQEKALGVVQRSYNAYAVRVQDSSESPTSGAMMGGLSQGSDKGPGTLKVVPAGETKEGVLCIEMRIRLYTDGAMSKLLESLAKIFGVSNENDHLHTSGDVCSQE*GRTRAFTFSDTDNPSVQLQGPFLIQKL 956
PLRRVL KRS SDSGR LERFHVCPLLFRE+MGA S+FGRGYLPTSRPVYRYIFLCPGQAQ LGVVQRSYNAYAVRVQD++ S T GA+MGGLSQGSDKG GTLKVVPAGETK GVLCIEMRIRLYTDGAMSKLLE+LAK D+DNP+V+LQ PF+IQKL
Sbjct: 1167 PLRRVLQKRSTSDSGRSLERFHVCPLLFRERMGAVSSFGRGYLPTSRPVYRYIFLCPGQAQ-------------------ILGVVQRSYNAYAVRVQDTNGSLTPGAIMGGLSQGSDKGQGTLKVVPAGETKAGVLCIEMRIRLYTDGAMSKLLENLAK-------------------------------DSDNPTVRLQAPFVIQKL 1324
BLAST of mRNA_E-fasciculatus_F_contig10675.536.1 vs. uniprot
Match: D7G7J2_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J2_ECTSI) HSP 1 Score: 192 bits (488), Expect = 2.630e-51 Identity = 115/215 (53.49%), Postives = 137/215 (63.72%), Query Frame = 3
Query: 333 PLRRVLPKRSNSDSGR------LLERFHVCPLLFREKMGAASTFGRGYLPTSRPVYRYIFLCPGQAQNLVQSITGVCYFNMRAQEKALGVVQRSYNAYAVRVQDSSESPTSGAMMGGLSQGSDKGPGTLKVVPAGETKEGVLCIEMRIRLYTDGAMSKLLESLAKIFGVSNENDHLHTSGDVCSQE*GRTRAFTFSDTDNPSVQLQGPFLIQKLA 959
P+ + +R++ + G LLERF VCPLLFRE+MGAAS GRG+LP+ RPVYRYIF CP +AQ Q+++GVCYFNMRAQE+ GVVQR YNA+AVR+ D E PT G + S+ S K P KVVPA ET EGVLCIEMRIR+Y DGAMSKLLE L+K DTDN +VQLQGPFL+ KLA
Sbjct: 1065 PIEMDVAQRADENDGGWGSSTDLLERFQVCPLLFRERMGAASAVGRGHLPSKRPVYRYIFSCPAKAQAQAQAVSGVCYFNMRAQEEGKGVVQRPYNAFAVRLLDV-EPPTPGGRVA-WSKTSAKLP---KVVPAEETTEGVLCIEMRIRMYHDGAMSKLLEKLSK-------------------------------DTDNVAVQLQGPFLVNKLA 1243
BLAST of mRNA_E-fasciculatus_F_contig10675.536.1 vs. uniprot
Match: D7G7J1_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J1_ECTSI) HSP 1 Score: 191 bits (486), Expect = 4.860e-51 Identity = 111/200 (55.50%), Postives = 131/200 (65.50%), Query Frame = 3
Query: 360 SNSDSGRLLERFHVCPLLFREKMGAASTFGRGYLPTSRPVYRYIFLCPGQAQNLVQSITGVCYFNMRAQEKALGVVQRSYNAYAVRVQDSSESPTSGAMMGGLSQGSDKGPGTLKVVPAGETKEGVLCIEMRIRLYTDGAMSKLLESLAKIFGVSNENDHLHTSGDVCSQE*GRTRAFTFSDTDNPSVQLQGPFLIQKLA 959
SN+D L ERF VCPLLFRE+MGAAS GRG+LP+ RPVYRYIF CP Q Q+++GVCYFNMRAQE+ GVVQR+YNA+AVR+ D E PT G + ++G K P K+VPAGET EG+LCIEMRIR+Y DGAMSKLLE L++ DTDN +VQLQGPFLI KLA
Sbjct: 1089 SNTD---LFERFQVCPLLFRERMGAASAVGRGHLPSKRPVYRYIFSCPANGQAQAQAVSGVCYFNMRAQEEGKGVVQRAYNAFAVRLLDV-EPPTPGGRVA-WTKGFAKLP---KIVPAGETTEGILCIEMRIRMYHDGAMSKLLEKLSQ-------------------------------DTDNAAVQLQGPFLINKLA 1249
BLAST of mRNA_E-fasciculatus_F_contig10675.536.1 vs. uniprot
Match: D7FQW8_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW8_ECTSI) HSP 1 Score: 183 bits (465), Expect = 2.950e-48 Identity = 107/195 (54.87%), Postives = 122/195 (62.56%), Query Frame = 3
Query: 372 SGRLLERFHVCPLLFREKMGAASTFGRGYLPTSRPVYRYIFLCPGQAQNLVQSITGVCYFNMRAQEKALGVVQRSYNAYAVRVQDSSESPTSGAMMGGLSQGSDKGPGTLKVVPAGETKEGVLCIEMRIRLYTDGAMSKLLESLAKIFGVSNENDHLHTSGDVCSQE*GRTRAFTFSDTDNPSVQLQGPFLIQKL 956
S +LL+RFHVCPLLFREKMG S GRG L T RP YRYIF CPGQAQ LV++I GVC+F+M Q GV+QR+YNAYAVRVQ G + G GS KG +VVPA ET EGVLCIEMRIRLY DGAMS+LLE L+K DTDNP++QLQGPF+I KL
Sbjct: 922 SKKLLQRFHVCPLLFREKMGTDSPIGRGLLFTKRPTYRYIFSCPGQAQALVETIHGVCHFHMPGQVPGKGVIQRAYNAYAVRVQ--------GFVDG--KDGSGKGATPPRVVPAQETSEGVLCIEMRIRLYHDGAMSQLLEKLSK-------------------------------DTDNPAIQLQGPFIITKL 1075
BLAST of mRNA_E-fasciculatus_F_contig10675.536.1 vs. uniprot
Match: A0A6H5JUS3_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS3_9PHAE) HSP 1 Score: 140 bits (354), Expect = 5.860e-36 Identity = 69/81 (85.19%), Postives = 72/81 (88.89%), Query Frame = 3
Query: 333 PLRRVLPKRSNSDSGRLLERFHVCPLLFREKMGAASTFGRGYLPTSRPVYRYIFLCPGQAQNLVQSIT-GVCYFNMRAQEK 572
P RRVLPKRS SDSGR L+RFHVCPLLFRE MGA S FGRGYLPTSRPVYRY+FLCPG+AQ L QSIT GVCYFNMRAQEK
Sbjct: 220 PPRRVLPKRSTSDSGRSLDRFHVCPLLFREMMGAVSAFGRGYLPTSRPVYRYMFLCPGRAQILAQSITTGVCYFNMRAQEK 300
BLAST of mRNA_E-fasciculatus_F_contig10675.536.1 vs. uniprot
Match: A0A6H5K5R1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R1_9PHAE) HSP 1 Score: 109 bits (272), Expect = 6.770e-26 Identity = 55/58 (94.83%), Postives = 56/58 (96.55%), Query Frame = 3
Query: 639 PTSGAMMGGLSQGSDKGPGTLKVVPAGETKEGVLCIEMRIRLYTDGAMSKLLESLAKI 812
PT G MMGGLSQGSDKGPGTLKVVPAGETKEGVLCIEMRIRLYTDGAMSKLLESLAK+
Sbjct: 25 PTPGVMMGGLSQGSDKGPGTLKVVPAGETKEGVLCIEMRIRLYTDGAMSKLLESLAKV 82
BLAST of mRNA_E-fasciculatus_F_contig10675.536.1 vs. uniprot
Match: A0A6H5JX59_9PHAE (Cytochrome b5 heme-binding domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX59_9PHAE) HSP 1 Score: 111 bits (278), Expect = 1.710e-23 Identity = 89/241 (36.93%), Postives = 111/241 (46.06%), Query Frame = 3
Query: 384 LERFHVCPLLFREKMGAASTFGRGYLPTSRPVYRYIFLCPGQAQNLVQSITGVCYFNMR-AQEKALGVVQRSYNAYAVRVQDSSESPTSGAMMGGLSQGSDKGPGTLKVVPAGETKEGVLCIEMRIRLYTDGAMSKLLESLAK------IFGVSNENDHLHTSGDVCSQ--------------E*GRTRAFT-----------------------------FSDTDNPSVQLQGPFLIQKL 956
L FHVCPLL EK+ G G RPV++++F C G A+ LV S+ GVC+F MR AQE + VV+R+YNA+AVRV D G +VVPA E+ EGVLC+EMR RLY DG MS LL L K IF S+ + H H V ++ G T AF + DNP+VQLQGPFL +L
Sbjct: 581 LHLFHVCPLLLHEKL----CDGGG-----RPVHKFVFACLGTAEALVGSMEGVCHFKMRLAQEAGMIVVERAYNAFAVRVLDEE--------------------GKRRVVPALESSEGVLCVEMRARLYPDGLMSGLLAQLVKVVPTVAIFCHSSTHKHHHMFISVSNKLSQSPTGDRPTNGSTDGSTYAFDRLFWEERSIRETPTIRAPCSFCGWVRGGGHQNLDNPAVQLQGPFLQHRL 792
BLAST of mRNA_E-fasciculatus_F_contig10675.536.1 vs. uniprot
Match: A0A6H5KC42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC42_9PHAE) HSP 1 Score: 110 bits (275), Expect = 3.880e-23 Identity = 70/156 (44.87%), Postives = 85/156 (54.49%), Query Frame = 3
Query: 384 LERFHVCPLLFREKMGAASTFGRGYLPTSRPVYRYIFLCPGQAQNLVQSITGVCYFNMR-AQEKALGVVQRSYNAYAVRVQDSSESPTSGAMMGGLSQGSDKGPGTLKVVPAGETKEGVLCIEMRIRLYTDGAMSKLLESLAKIFGVSNENDHLHT 848
L FHVCPLL EK+ G G RPV++++F CPG A LV S+ GVC+F MR QE + VV+R+YNA+AVRV D G +VVPA E+ EGVLC+EMRIRLY DG MS LL L K+ H T
Sbjct: 402 LHLFHVCPLLLHEKL----CDGGG-----RPVHKFVFACPGTAAALVGSMEGVCHFKMRLTQEAGMTVVERAYNAFAVRVLDEE--------------------GKRRVVPALESSEGVLCVEMRIRLYPDGLMSGLLARLIKVVPTVAITGHCST 528 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10675.536.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10675.536.1 >prot_E-fasciculatus_F_contig10675.536.1 ID=prot_E-fasciculatus_F_contig10675.536.1|Name=mRNA_E-fasciculatus_F_contig10675.536.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=150bp MGAASTFGRGYLPTSRPVYRYIFLCPGQAQNLVQSITGVCYFNMRAQEKAback to top mRNA from alignment at E-fasciculatus_F_contig10675:355..3284+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10675.536.1 ID=mRNA_E-fasciculatus_F_contig10675.536.1|Name=mRNA_E-fasciculatus_F_contig10675.536.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2930bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10675:355..3284+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10675:355..3284+ >mRNA_E-fasciculatus_F_contig10675.536.1 ID=mRNA_E-fasciculatus_F_contig10675.536.1|Name=mRNA_E-fasciculatus_F_contig10675.536.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=900bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10675:355..3284+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |