mRNA_E-fasciculatus_F_contig1067.530.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1067.530.1 vs. uniprot
Match: D8LE27_ECTSI (Autophagy-related protein 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE27_ECTSI) HSP 1 Score: 172 bits (437), Expect = 3.890e-48 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1
Query: 1 DSLEHAYDTLAKEVQVAAQTIIAIPYEDQEEVVGPHGRSYVRSVARALPVAVLRPVVGASEAVSCTLLGFRNYMAPVMRKEEEMRWS 261
DSLEHAYDTLAKEVQVAAQTIIAIPYEDQEEVVGPHGRSYVRSVARALPVAVLRPVVGASEAVSCTLLGFRNYMAPVMRKEEEMRWS
Sbjct: 2137 DSLEHAYDTLAKEVQVAAQTIIAIPYEDQEEVVGPHGRSYVRSVARALPVAVLRPVVGASEAVSCTLLGFRNYMAPVMRKEEEMRWS 2223
BLAST of mRNA_E-fasciculatus_F_contig1067.530.1 vs. uniprot
Match: A0A835YJZ3_9STRA (Autophagy-related protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJZ3_9STRA) HSP 1 Score: 100 bits (249), Expect = 2.180e-23 Identity = 52/87 (59.77%), Postives = 66/87 (75.86%), Query Frame = 1
Query: 1 DSLEHAYDTLAKEVQVAAQTIIAIPYEDQEEVVGPHGRSYVRSVARALPVAVLRPVVGASEAVSCTLLGFRNYMAPVMRKEEEMRWS 261
DSLE AY +L++EV AA TI+AIPYE++EE+ G Y R+V RALP+AVLRPV+GA+EAVS LLGFRN + P +KEEE +W
Sbjct: 275 DSLEQAYVSLSREVLSAAHTIVAIPYEEREELGG-----YARTVVRALPIAVLRPVIGATEAVSFALLGFRNTLQPGKKKEEEAQWQ 356
BLAST of mRNA_E-fasciculatus_F_contig1067.530.1 vs. uniprot
Match: A0A4D9DDJ8_9STRA (ATG_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDJ8_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 2.840e-19 Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = 1
Query: 1 DSLEHAYDTLAKEVQVAAQTIIAIPYEDQEEVVGPHGRSYVRSVARALPVAVLRPVVGASEAVSCTLLGFRNYMAPVMRKEEEMRW 258
+ LEHAYDTL+K AA TIIA+P ++ E GP G VR+V RALP+AV++PVVG SEA+S TLLG RN + P R+EEE W
Sbjct: 528 EGLEHAYDTLSKGFSTAAHTIIAVPIQEMERS-GPQGS--VRAVIRALPIAVVKPVVGVSEALSITLLGVRNKLDPGSRREEEELW 610
BLAST of mRNA_E-fasciculatus_F_contig1067.530.1 vs. uniprot
Match: W7TWI8_9STRA (Autophagy regulatory protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWI8_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 9.340e-19 Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = 1
Query: 1 DSLEHAYDTLAKEVQVAAQTIIAIPYEDQEEVVGPHGRSYVRSVARALPVAVLRPVVGASEAVSCTLLGFRNYMAPVMRKEEEMRW 258
+ LEHAYDTL+K A TIIA+P ++ E GP G VR+V RALP+AV++PVVG SEA+S TLLG RN + P R+EEE W
Sbjct: 436 EGLEHAYDTLSKGFSTVAHTIIAVPIQEMERS-GPQGS--VRAVIRALPIAVVKPVVGVSEALSITLLGVRNKLDPGSRREEEELW 518
BLAST of mRNA_E-fasciculatus_F_contig1067.530.1 vs. uniprot
Match: A0A165FHK4_9BASI (Autophagy-related protein 2 n=1 Tax=Calocera cornea HHB12733 TaxID=1353952 RepID=A0A165FHK4_9BASI) HSP 1 Score: 83.2 bits (204), Expect = 1.100e-16 Identity = 44/87 (50.57%), Postives = 62/87 (71.26%), Query Frame = 1
Query: 1 DSLEHAYDTLAKEVQVAAQTIIAIPYEDQEEVVGPHGRSYVRSVARALPVAVLRPVVGASEAVSCTLLGFRNYMAPVMRKEEEMRWS 261
+ ++ AY +L+K V AAQTI+A+P E E P+G+ VR+V RA+P+AVL+P++GA+EAVS TLLG RN M P MR E E ++
Sbjct: 1767 EGVQAAYKSLSKNVHSAAQTILAVPMEVYER---PNGQGPVRTVVRAVPIAVLKPMIGATEAVSKTLLGIRNSMDPSMRLEHEGKYK 1850
BLAST of mRNA_E-fasciculatus_F_contig1067.530.1 vs. uniprot
Match: A0A024G2E4_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G2E4_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 2.820e-16 Identity = 42/87 (48.28%), Postives = 66/87 (75.86%), Query Frame = 1
Query: 1 DSLEHAYDTLAKEVQVAAQTIIAIPYEDQEEVVGPHGRSYVRSVARALPVAVLRPVVGASEAVSCTLLGFRNYMAPVMRKEEEMRWS 261
+ LE AYD+LA+E+ +AA+TI+AIP + ++ G HG YVRSV RA+PVA+LRP++GA+EA+S L+G RN + P M+++ + ++
Sbjct: 2288 EGLEQAYDSLARELHIAAKTIVAIPLVEYKKT-GSHG--YVRSVIRAVPVALLRPMIGATEAMSKALIGVRNAVDPEMKEDIDNKFK 2371
BLAST of mRNA_E-fasciculatus_F_contig1067.530.1 vs. uniprot
Match: A0A167PZC1_CALVF (Uncharacterized protein n=1 Tax=Calocera viscosa (strain TUFC12733) TaxID=1330018 RepID=A0A167PZC1_CALVF) HSP 1 Score: 81.6 bits (200), Expect = 3.830e-16 Identity = 43/87 (49.43%), Postives = 62/87 (71.26%), Query Frame = 1
Query: 1 DSLEHAYDTLAKEVQVAAQTIIAIPYEDQEEVVGPHGRSYVRSVARALPVAVLRPVVGASEAVSCTLLGFRNYMAPVMRKEEEMRWS 261
+ ++ AY +L++ V AAQTI+A+P E E P+G+ VR+V RA+P+AVL+P++GA+EAVS TLLG RN M P MR E E ++
Sbjct: 1747 EGVQAAYKSLSRNVHSAAQTILAVPMEVYER---PNGQGPVRTVVRAVPIAVLKPMIGATEAVSKTLLGIRNSMDPSMRLETEGKYK 1830
BLAST of mRNA_E-fasciculatus_F_contig1067.530.1 vs. uniprot
Match: F0X170_9STRA (Autophagy-related protein 2 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X170_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 7.180e-16 Identity = 41/87 (47.13%), Postives = 66/87 (75.86%), Query Frame = 1
Query: 1 DSLEHAYDTLAKEVQVAAQTIIAIPYEDQEEVVGPHGRSYVRSVARALPVAVLRPVVGASEAVSCTLLGFRNYMAPVMRKEEEMRWS 261
+ LE AYD+LA+E+ +AA+TI+AIP + ++ G HG YVRSV RA+PVA+LRP++GA+EA+S L+G RN + P ++++ + ++
Sbjct: 2323 EGLEQAYDSLARELHIAAKTIVAIPLVEYKKT-GSHG--YVRSVIRAVPVALLRPMIGATEAMSKALIGVRNAVDPELKEDIDNKFK 2406
BLAST of mRNA_E-fasciculatus_F_contig1067.530.1 vs. uniprot
Match: A0A7S3H9P4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9P4_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 6.930e-15 Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 7 LEHAYDTLAKEVQVAAQTIIAIPYEDQEEVVGPHGRSYVRSVARALPVAVLRPVVGASEAVSCTLLGFRNYMAPVMRKEEEMRWS 261
LE AY ++++EV AA+T+IAIP + GP G Y++SV RA PVAVLRPV G E VS T+LG RN + P R +EE W+
Sbjct: 154 LEQAYGSVSREVASAAETVIAIPIREYVHT-GPGG--YLKSVIRAFPVAVLRPVAGVMEGVSYTMLGLRNNLDPEARIQEEDMWN 235
BLAST of mRNA_E-fasciculatus_F_contig1067.530.1 vs. uniprot
Match: A0A2D4CBH7_PYTIN (Autophagy-related protein 2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBH7_PYTIN) HSP 1 Score: 77.8 bits (190), Expect = 8.200e-15 Identity = 41/86 (47.67%), Postives = 64/86 (74.42%), Query Frame = 1
Query: 1 DSLEHAYDTLAKEVQVAAQTIIAIPYEDQEEVVGPHGRSYVRSVARALPVAVLRPVVGASEAVSCTLLGFRNYMAPVMRKEEEMRW 258
+ L AYD++++E+ VAA+TI+A+P + ++ G G YVRSV RA+PVAVLRP++GASEAVS L+G RN + P ++++ E ++
Sbjct: 450 EGLYQAYDSISRELHVAAKTIVAVPLVEYKKT-GSQG--YVRSVIRAVPVAVLRPMIGASEAVSKALIGVRNAVDPELKEDVENKF 532 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1067.530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1067.530.1 >prot_E-fasciculatus_F_contig1067.530.1 ID=prot_E-fasciculatus_F_contig1067.530.1|Name=mRNA_E-fasciculatus_F_contig1067.530.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=88bp DSLEHAYDTLAKEVQVAAQTIIAIPYEDQEEVVGPHGRSYVRSVARALPVback to top mRNA from alignment at E-fasciculatus_F_contig1067:3939..4832+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1067.530.1 ID=mRNA_E-fasciculatus_F_contig1067.530.1|Name=mRNA_E-fasciculatus_F_contig1067.530.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=894bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1067:3939..4832+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1067:3939..4832+ >mRNA_E-fasciculatus_F_contig1067.530.1 ID=mRNA_E-fasciculatus_F_contig1067.530.1|Name=mRNA_E-fasciculatus_F_contig1067.530.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=528bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1067:3939..4832+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |