prot_E-fasciculatus_F_contig10665.528.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10665.528.1
Unique Nameprot_E-fasciculatus_F_contig10665.528.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length119
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10665.528.1 vs. uniprot
Match: A0A6H5JVI5_9PHAE (BHLH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI5_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 4.830e-37
Identity = 80/111 (72.07%), Postives = 85/111 (76.58%), Query Frame = 0 
Query:   10 GDFPCADLSGSNGTEIQQHKQEQQPLPSPPKTSGRKRSLPQTCSWDNLGPKALSEISASLLAGGWDGSGNSSMSIS-SPQFLPXXXXXXXXXXXGPSANSVAAAPTASPCS 119
            GDF CADLSGSNGTE QQ  ++QQPLPSPPKTSGRKRSLPQT +WDNLGPKALSEISASLLAGGWDG  NSS S+S SP FL            GPSA+SVA   T SPCS
Sbjct:   47 GDFSCADLSGSNGTETQQQYKQQQPLPSPPKTSGRKRSLPQTSNWDNLGPKALSEISASLLAGGWDGGVNSSYSVSTSPHFL---GPPAGAGGGGPSADSVAVPHTTSPCS 154
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10665.528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JVI5_9PHAE4.830e-3772.07BHLH domain-containing protein n=1 Tax=Ectocarpus ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10665contigE-fasciculatus_F_contig10665:2163..2519 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10665.528.1mRNA_E-fasciculatus_F_contig10665.528.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10665 2163..2519 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10665.528.1 ID=prot_E-fasciculatus_F_contig10665.528.1|Name=mRNA_E-fasciculatus_F_contig10665.528.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=119bp
MRTFLLLYSGDFPCADLSGSNGTEIQQHKQEQQPLPSPPKTSGRKRSLPQ
TCSWDNLGPKALSEISASLLAGGWDGSGNSSMSISSPQFLPPPPAAAAAA
AAGPSANSVAAAPTASPCS
back to top