prot_E-fasciculatus_F_contig10657.522.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10657.522.1
Unique Nameprot_E-fasciculatus_F_contig10657.522.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length543
Homology
BLAST of mRNA_E-fasciculatus_F_contig10657.522.1 vs. uniprot
Match: D7FMF6_ECTSI (SHR-BD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF6_ECTSI)

HSP 1 Score: 907 bits (2343), Expect = 0.000e+0
Identity = 480/550 (87.27%), Postives = 502/550 (91.27%), Query Frame = 0
Query:    1 SVSRFGKRGTVVGGMSDQPFSTSSSTEGQLQQPGRRKRHHASWLLSVRLVTAHSPSDGLQTSSEDPPGVSGVGGNDDEGQRFLNLPLTEAGRSFLQCMLVMEGVPGRKAAGDRGQSPRRLSRCDAIWEVCLENGRHTVTLRSALEVVNKCGSWLEVRCSTDSFAAGRGEGDKAKEEVVGAVAPGGRLPLPLRWSRAEDIRLRPWPRGQGG---HGGRSSSPSNSNVPKKVVEVHDLGGGSGNQGELSYEYSDCSVLVPAARAGEGELGATTAVIPWVACNPSQPSTNSPSDGDSTASRKPLFLFLEGLDANDPEGG-HGAAIPGGGSRRNASSDPWSRARRRSRDGGGRSSSRVVANSTLHGRQRQRSDAAAGPAAAFPTPMAHSPRSTGHPMAALSLRPLEVVVYASLSFRNLLPVGVGWRVAGARGDAGARLAEGWLAPGDGVHVLEANAMAMAPSLSFKVAGFDWTPPRQVAVAELMRPTRAGSTDSDGGSXXXXXXXXRGREGG---VSTTNEHVPGISLQSVPCRNMSNQILYLSVEAASVRVRN 543
            SVSRFGKRGTVVGGMSDQPFSTSS+TEGQ QQPGRR R HASWLLSVRLVTA SPSD  QT ++DPPGVSGVGG+DDEGQRFLNLPLTEAGRSFLQC+LVMEGVPGR+AAGDRGQSPRRLSRCDAIWEVCLENGRHTVTLRSALEVVNKCGSWLEVRCSTDSFAAGRG+GDKAKEEVVGAVAPGGRLPLPLRWSRAEDIRLRPWPR QGG    G RSSSPSN+++PKKVVEVH L G SG+QGE SYEYSDCSVLVPAARAGEGELGATTAVIPWVACNPSQPSTNSP+DGD+TA RKPLFLFLEGLDANDPEGG HGAAIPGGGSRR ASSDPWS+ RR SRDGGGRS+SRVVAN+TLHGRQRQR DA+      FPT +  SPRS G+PMAALSLRPLEVVVYASLSFRNLLPVGVGWRVAGARGDAGARLAEGWL PGDGVHVLEANAMAMAPSLSFKVAGFDWTPP QVAVAELMRPTRAGSTDSDG  XXXXXXXX         V TT+EHVPGISLQSVPCRNMSNQILYLSVEAASVR+ +
Sbjct:  103 SVSRFGKRGTVVGGMSDQPFSTSSTTEGQSQQPGRRNRRHASWLLSVRLVTAQSPSDVQQTGADDPPGVSGVGGDDDEGQRFLNLPLTEAGRSFLQCLLVMEGVPGREAAGDRGQSPRRLSRCDAIWEVCLENGRHTVTLRSALEVVNKCGSWLEVRCSTDSFAAGRGDGDKAKEEVVGAVAPGGRLPLPLRWSRAEDIRLRPWPRSQGGGFGDGRRSSSPSNNSMPKKVVEVHHLAGESGDQGERSYEYSDCSVLVPAARAGEGELGATTAVIPWVACNPSQPSTNSPADGDTTACRKPLFLFLEGLDANDPEGGGHGAAIPGGGSRRKASSDPWSKTRRTSRDGGGRSNSRVVANATLHGRQRQRPDAS------FPTRVVDSPRSAGNPMAALSLRPLEVVVYASLSFRNLLPVGVGWRVAGARGDAGARLAEGWLTPGDGVHVLEANAMAMAPSLSFKVAGFDWTPPHQVAVAELMRPTRAGSTDSDGXXXXXXXXXXXXXXXXXXXVPTTSEHVPGISLQSVPCRNMSNQILYLSVEAASVRMNS 646          
BLAST of mRNA_E-fasciculatus_F_contig10657.522.1 vs. uniprot
Match: A0A6H5L5D8_9PHAE (PHS protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5D8_9PHAE)

HSP 1 Score: 865 bits (2235), Expect = 3.960e-310
Identity = 463/536 (86.38%), Postives = 481/536 (89.74%), Query Frame = 0
Query:   15 MSDQPFSTSSSTEGQLQQPGRRKRHHASWLLSVRLVTAHSPSDGLQTSSEDPPGVSGVGGNDDEGQRFLNLPLTEAGRSFLQCMLVMEGVPGRKAAGDRGQSPRRLSRCDAIWEVCLENGRHTVTLRSALEVVNKCGSWLEVRCSTDSFAAGRGEGDKAKEEVVGAVAPGGRLPLPLRWSRAEDIRLRPWPRGQGGHGG---RSSSPSNSNVPKKVVEVHDLGGGSGNQGELSYEYSDCSVLVPAARAGEGELGATTAVIPWVACNPSQPSTNSPSDGDSTASRKPLFLFLEGLDANDPEGG-HGAAIPGGGSRRNASSDPWSRARRRSRDGGGRSSSRVVANSTLHGRQRQRSDAAAGPAAAFPTPMAHSPRSTGHPMAALSLRPLEVVVYASLSFRNLLPVGVGWRVAGARGDAGARLAEGWLAPGDGVHVLEANAMAMAPSLSFKVAGFDWTPPRQVAVAELMRPTRAGSTDSDGGSXXXXXXXXRGRE---GGVSTTNEHVPGISLQSVPCRNMSNQILYLSVEAASVRVRN 543
            MSDQPFSTSSS EGQLQQPGRR R HASWLLSVRLVTA SPSDG Q  +EDPP VSGVGG+DDEGQRFLNLPLTE GRSFLQCMLVMEGVPGRKAAGDRGQSPRRLSRCDAIWEVCLENGRHTVTLRSALEVVNKCGSWLEVRCSTDSFAAGRG+GD AKEEVVGAVAPGGRLPLPLRWSRAEDIRLRPW            RSSSPSN+++PKKVV++HDL  GSG+QGE SYEYSDCSVLVPAARAGEGELGATTAVIPWVACNPSQPS NSP+DGD+ ASRKPLFLFLEGLDANDP+GG HGAAIPGGGSR+NASS+PWSR RRRSRDGGGRSS RVVANSTLHGRQRQR DAA      FPT +  SPRS G  MAALSLRPLEVVVYASLSFRNLLPVGVGWRVAGARGDAGARLAEGWLAPGDGVHVLEAN MAMAPSLS KVAGFDWT P QVAVAELMRPTR GST SDG  XXXXXXXXRGRE   GGVSTT+EHVPGISLQSVPCRNMSNQILYLSVEAASVR+ +
Sbjct:    1 MSDQPFSTSSSAEGQLQQPGRRNRRHASWLLSVRLVTAQSPSDGPQAGAEDPPEVSGVGGDDDEGQRFLNLPLTEVGRSFLQCMLVMEGVPGRKAAGDRGQSPRRLSRCDAIWEVCLENGRHTVTLRSALEVVNKCGSWLEVRCSTDSFAAGRGDGDNAKEEVVGAVAPGGRLPLPLRWSRAEDIRLRPWXXXXXXXXXXXXRSSSPSNTSMPKKVVQIHDLAEGSGDQGERSYEYSDCSVLVPAARAGEGELGATTAVIPWVACNPSQPSANSPADGDTNASRKPLFLFLEGLDANDPDGGRHGAAIPGGGSRQNASSNPWSRTRRRSRDGGGRSSGRVVANSTLHGRQRQRPDAA------FPTRVVDSPRSAGISMAALSLRPLEVVVYASLSFRNLLPVGVGWRVAGARGDAGARLAEGWLAPGDGVHVLEANTMAMAPSLSLKVAGFDWTSPHQVAVAELMRPTREGSTGSDG-XXXXXXXXXRGRELPGGGVSTTSEHVPGISLQSVPCRNMSNQILYLSVEAASVRMNS 529          
BLAST of mRNA_E-fasciculatus_F_contig10657.522.1 vs. uniprot
Match: A0A836C849_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C849_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.400e-9
Identity = 57/163 (34.97%), Postives = 71/163 (43.56%), Query Frame = 0
Query:   78 EGQRFLNLPLTEAGRSFLQCMLVMEGVPG--------------RKAAGDRGQSPRRLSRCDAIWEVCLENGRHTVTLRSALEVVNKCGSWLEV---RCSTDSFAAGR--------------------GEGDKAKEEVVGAVAPGGRLPLPLRWSRAEDIRLRP 203
            + Q  LNLPL  AG   L+C L++ G  G                  G   QSP +   C+ IWEV LE+GR  +TLRSA+E+ N     LEV    CS    AA                      G+        V  +APG R  LPLRWS A D+R+RP
Sbjct: 3843 DAQPLLNLPLIRAGTLRLECSLLL-GDDGDGEXXXXXXXXXXXXXXXGGALQSPPQS--CEVIWEVRLESGRRVLTLRSAVELANLTSLPLEVSAQHCSAPGAAADAXXXXXXXXXXXXXXXXXXXXGDAVPPAPPYVAHIAPGERHALPLRWSAANDVRVRP 4002          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10657.522.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FMF6_ECTSI0.000e+087.27SHR-BD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5L5D8_9PHAE3.960e-31086.38PHS protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A836C849_9STRA1.400e-934.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10657contigE-fasciculatus_F_contig10657:623..4768 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10657.522.1mRNA_E-fasciculatus_F_contig10657.522.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10657 623..4768 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10657.522.1 ID=prot_E-fasciculatus_F_contig10657.522.1|Name=mRNA_E-fasciculatus_F_contig10657.522.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=543bp
SVSRFGKRGTVVGGMSDQPFSTSSSTEGQLQQPGRRKRHHASWLLSVRLV
TAHSPSDGLQTSSEDPPGVSGVGGNDDEGQRFLNLPLTEAGRSFLQCMLV
MEGVPGRKAAGDRGQSPRRLSRCDAIWEVCLENGRHTVTLRSALEVVNKC
GSWLEVRCSTDSFAAGRGEGDKAKEEVVGAVAPGGRLPLPLRWSRAEDIR
LRPWPRGQGGHGGRSSSPSNSNVPKKVVEVHDLGGGSGNQGELSYEYSDC
SVLVPAARAGEGELGATTAVIPWVACNPSQPSTNSPSDGDSTASRKPLFL
FLEGLDANDPEGGHGAAIPGGGSRRNASSDPWSRARRRSRDGGGRSSSRV
VANSTLHGRQRQRSDAAAGPAAAFPTPMAHSPRSTGHPMAALSLRPLEVV
VYASLSFRNLLPVGVGWRVAGARGDAGARLAEGWLAPGDGVHVLEANAMA
MAPSLSFKVAGFDWTPPRQVAVAELMRPTRAGSTDSDGGSGGGSSSSSRG
REGGVSTTNEHVPGISLQSVPCRNMSNQILYLSVEAASVRVRN
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