prot_E-fasciculatus_F_contig10656.521.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10656.521.1
Unique Nameprot_E-fasciculatus_F_contig10656.521.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length98
Homology
BLAST of mRNA_E-fasciculatus_F_contig10656.521.1 vs. uniprot
Match: A0A6H5JEA6_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA6_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 3.270e-29
Identity = 63/79 (79.75%), Postives = 65/79 (82.28%), Query Frame = 0
Query:    1 MFKQLMENNATVDVAKAQAAGGXXEDDQGKGDDASAKELLMRPPGVNAYNCRNVLRKVDTIAELSQLSEESCGPCLERG 79
            MFK+LM+NNA VDVAKAQAAGG  EDDQG GDDASAKELLMR PGVN YN RNVLR VDTIAELSQLSEE   P L  G
Sbjct: 1127 MFKELMKNNAAVDVAKAQAAGGGGEDDQGTGDDASAKELLMRLPGVNVYNFRNVLRGVDTIAELSQLSEEQLRPLLGEG 1205          
BLAST of mRNA_E-fasciculatus_F_contig10656.521.1 vs. uniprot
Match: D7FH45_ECTSI (ERCC4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH45_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 4.960e-20
Identity = 53/76 (69.74%), Postives = 58/76 (76.32%), Query Frame = 0
Query:    1 MFKQLMENNATVDVAKAQAAGGXXEDDQGKGDDASAKELLMRPPGVNAYNCRNVLRKVDTIAELSQLSEESCGPCL 76
            + ++LM+NNA VDVAKAQAAGG  EDDQG GDDASAKELLMR PGV        LR+VDTIAELSQLSEE   P L
Sbjct: 1050 VVQELMKNNAAVDVAKAQAAGGGGEDDQGTGDDASAKELLMRLPGV--------LREVDTIAELSQLSEEQLRPLL 1117          
BLAST of mRNA_E-fasciculatus_F_contig10656.521.1 vs. uniprot
Match: A0A7S3L7V4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L7V4_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 5.190e-5
Identity = 32/86 (37.21%), Postives = 45/86 (52.33%), Query Frame = 0
Query:    1 MFKQLMENNATVDVAKAQAAG------GXXEDDQGKGDDA----------SAKELLMRPPGVNAYNCRNVLRKVDTIAELSQLSEE 70
            +FK L  N+  VDV KA   G           D+ KG +           SA+E+L+R PGVN +  R ++ +VDT+AEL+ LS E
Sbjct:  136 IFKDLKMNHEEVDVEKAMEIGRNESVEALLRADKSKGGEEGEEEEDEINESAREMLLRLPGVNVHAARRIMEEVDTLAELALLSRE 221          
BLAST of mRNA_E-fasciculatus_F_contig10656.521.1 vs. uniprot
Match: A0A165RT92_9APHY (ERCC4 domain-containing protein n=1 Tax=Daedalea quercina L-15889 TaxID=1314783 RepID=A0A165RT92_9APHY)

HSP 1 Score: 50.1 bits (118), Expect = 6.970e-5
Identity = 25/68 (36.76%), Postives = 42/68 (61.76%), Query Frame = 0
Query:    1 MFKQLMENNATVDVAKAQAAGGXXEDDQGKGDDASAKELLMRPPGVNAYNCRNVLRKVDTIAELSQLS 68
            +F+ L  N++  D  KA   G   + + G   +A+A+ELL   PG+ A N ++V+ KV+++AEL +LS
Sbjct:  889 IFRDLKANSSEPDPTKAIVVGAEEDPNAGAAVNAAAEELLQSLPGITAKNVKHVMSKVESVAELCELS 956          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10656.521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JEA6_9PHAE3.270e-2979.75ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FH45_ECTSI4.960e-2069.74ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S3L7V4_9STRA5.190e-537.21Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A165RT92_9APHY6.970e-536.76ERCC4 domain-containing protein n=1 Tax=Daedalea q... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.20coord: 27..81
e-value: 5.1E-9
score: 37.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10656contigE-fasciculatus_F_contig10656:1142..2088 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10656.521.1mRNA_E-fasciculatus_F_contig10656.521.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10656 772..3404 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10656.521.1 ID=prot_E-fasciculatus_F_contig10656.521.1|Name=mRNA_E-fasciculatus_F_contig10656.521.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=98bp
MFKQLMENNATVDVAKAQAAGGGGEDDQGKGDDASAKELLMRPPGVNAYN
CRNVLRKVDTIAELSQLSEESCGPCLERGTPPSSSSSSHSPPLCSVL*
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