mRNA_E-fasciculatus_F_contig10653.519.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10653.519.1
Unique NamemRNA_E-fasciculatus_F_contig10653.519.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10653.519.1 vs. uniprot
Match: D7G418_ECTSI (Ribonucleoside-diphosphate reductase small chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G418_ECTSI)

HSP 1 Score: 503 bits (1296), Expect = 2.240e-176
Identity = 243/248 (97.98%), Postives = 247/248 (99.60%), Query Frame = 1 
Query:    1 VERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQERDHLFNAYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFASLENKPSRETVMAIVKEAVEVEKSFICGALPCSLIGMNAGVMAQYIEFVADRLLGSLGYGKNYGTQNPFDWMDLISLQGKTNFFEKRVGEYQKAGVMGGSGGPGEDRRNFRLDADF 744
            VERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQERD+LFNAYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFASLENKPSRETVMAIV+EAVEVEKSFICGALPCSLIGMNAGVM+QYIEFVADRLLGSLGYGK+YGTQNPFDWMDLISLQGKTNFFEKRVGEYQKAGVMGG GGPGEDRRNFRLDADF
Sbjct:  257 VERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQERDNLFNAYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFASLENKPSRETVMAIVREAVEVEKSFICGALPCSLIGMNAGVMSQYIEFVADRLLGSLGYGKSYGTQNPFDWMDLISLQGKTNFFEKRVGEYQKAGVMGGGGGPGEDRRNFRLDADF 504
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BLAST of mRNA_E-fasciculatus_F_contig10653.519.1 vs. uniprot
Match: A0A835YXN6_9STRA (Ferritin-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXN6_9STRA)

HSP 1 Score: 382 bits (982), Expect = 1.470e-130
Identity = 185/248 (74.60%), Postives = 206/248 (83.06%), Query Frame = 1 
Query:    1 VERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQERDHLFNAYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFASLENKPSRETVMAIVKEAVEVEKSFICGALPCSLIGMNAGVMAQYIEFVADRLLGSLGYGKNYGTQNPFDWMDLISLQGKTNFFEKRVGEYQKAGVMGGSGGPGEDRRNFRLDADF 744
            V RF  EVQ PEARCFYGFQIAMESIHQEMYA LLD YIKD+ E+D LFNA+  I C+K+KADWA RWIGS A+FAERLVAFAAVEG+FFSGSFCAIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC+L+  LE   SR  ++ I+ EAV+VEK FIC ALP SLIGMNA  M  YIEFVADR+L SLGY K+Y  +NPFDWM+LISLQGKTNFFEKRV EYQKAGVM G+    +D R FR+D DF
Sbjct:  129 VHRFCAEVQAPEARCFYGFQIAMESIHQEMYAALLDAYIKDRNEKDTLFNAHLKIHCIKRKADWAERWIGSTASFAERLVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACELYRMLERPLSRARILHIITEAVDVEKDFICDALPVSLIGMNAATMRTYIEFVADRMLQSLGYDKHYHARNPFDWMELISLQGKTNFFEKRVAEYQKAGVMAGTKEGSQDARVFRMDDDF 376
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BLAST of mRNA_E-fasciculatus_F_contig10653.519.1 vs. uniprot
Match: RIR2C_ARATH (Ribonucleoside-diphosphate reductase small chain C n=33 Tax=Brassicaceae TaxID=3700 RepID=RIR2C_ARATH)

HSP 1 Score: 368 bits (944), Expect = 1.960e-125
Identity = 174/247 (70.45%), Postives = 201/247 (81.38%), Query Frame = 1 
Query:    7 RFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQERDHLFNAYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFASLENKPSRETVMAIVKEAVEVEKSFICGALPCSLIGMNAGVMAQYIEFVADRLLGSLGYGKNYGTQNPFDWMDLISLQGKTNFFEKRVGEYQKAGVMGGSGGPGE-DRRNFRLDADF 744
            RF  +VQ+ EAR FYGFQIA+E+IH EMY+LLLDTYIKD +ERDHLF A   IPCV +KA WAM+WI    TFAER++AFA VEG+FFSGSFC+IFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC L+  L+ K S E V +IV +AVE+E+ F+C ALPC+L+GMN  +M+QYIEFVADRLLG+LGYGK YG  NPFDWM+LISLQGKTNFFEKRVG+YQKA VM    G G  D   F LD DF
Sbjct:   86 RFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDTYIKDNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREFVCDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFEKRVGDYQKASVMSSVNGNGAFDNHVFSLDEDF 332
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BLAST of mRNA_E-fasciculatus_F_contig10653.519.1 vs. uniprot
Match: A0A7J6X3S5_THATH (Ribonucleoside-diphosphate reductase small chain n=5 Tax=Mesangiospermae TaxID=1437183 RepID=A0A7J6X3S5_THATH)

HSP 1 Score: 368 bits (944), Expect = 3.050e-125
Identity = 171/246 (69.51%), Postives = 203/246 (82.52%), Query Frame = 1 
Query:    7 RFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQERDHLFNAYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFASLENKPSRETVMAIVKEAVEVEKSFICGALPCSLIGMNAGVMAQYIEFVADRLLGSLGYGKNYGTQNPFDWMDLISLQGKTNFFEKRVGEYQKAGVMGGSGGPGEDRRNFRLDADF 744
            RF +EVQ+ EAR FYGFQIA+E+IH EMY+LLL++YIKD  E++ LFNA   IPCVK+KA+WA+RWI    +FAER++AFA VEG+FFSGSFCAIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC L+  L+NK S E V  IV +AVE+E+ F+C A+PC+L+GMN  +M+QYIEFVADRL+G+LGY K Y TQNPFDWM+LISLQGKTNFFEKRVGEYQKA VM      G D   F+LD DF
Sbjct:   85 RFMKEVQIAEARAFYGFQIAIENIHSEMYSLLLESYIKDSNEKNRLFNAIETIPCVKKKAEWALRWIDGSESFAERVIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYGLLKNKLSEERVRGIVSDAVEIEREFVCEAIPCALVGMNCDLMSQYIEFVADRLIGALGYDKIYDTQNPFDWMELISLQGKTNFFEKRVGEYQKASVMNSLNVNGGDTHVFKLDEDF 330
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10653.519.1 vs. uniprot
Match: A4S0Z8_OSTLU (Uncharacterized protein n=3 Tax=Ostreococcus TaxID=70447 RepID=A4S0Z8_OSTLU)

HSP 1 Score: 367 bits (942), Expect = 3.560e-125
Identity = 173/246 (70.33%), Postives = 202/246 (82.11%), Query Frame = 1 
Query:    7 RFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQERDHLFNAYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFASLENKPSRETVMAIVKEAVEVEKSFICGALPCSLIGMNAGVMAQYIEFVADRLLGSLGYGKNYGTQNPFDWMDLISLQGKTNFFEKRVGEYQKAGVMGGSGGPGEDRRNFRLDADF 744
            RF  EVQ+PEAR FYGFQIA+E+IH EMY+LL+D YIKD  E+DHLF A + IPCVK+KADWA++WI S  +FAERL+AFA +EG+FFSGSFC+I+WLKKRGLMPGLTFSNE+ISRDEGLH DFAC LF+ L NKPS ET+  IV EAVE+EK F+C +LPC+L+GMNAG+M+ YIE+VAD L  SLG  K Y T NPFDWM+LISLQGKTNFFEKRVGEYQKAGVM   GG   +   F LD DF
Sbjct:   86 RFMGEVQIPEARAFYGFQIAIENIHSEMYSLLIDQYIKDPVEKDHLFRAIDTIPCVKKKADWALKWIDSSDSFAERLLAFACIEGIFFSGSFCSIYWLKKRGLMPGLTFSNELISRDEGLHRDFACLLFSMLNNKPSEETIRKIVTEAVEIEKEFVCDSLPCALVGMNAGMMSDYIEYVADHLFCSLGLAKEYNTTNPFDWMELISLQGKTNFFEKRVGEYQKAGVMNSIGGGNANA--FSLDEDF 329
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BLAST of mRNA_E-fasciculatus_F_contig10653.519.1 vs. uniprot
Match: UPI000B8D18F5 (ribonucleoside-diphosphate reductase small chain C n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8D18F5)

HSP 1 Score: 366 bits (940), Expect = 7.420e-125
Identity = 172/246 (69.92%), Postives = 201/246 (81.71%), Query Frame = 1 
Query:    7 RFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQERDHLFNAYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFASLENKPSRETVMAIVKEAVEVEKSFICGALPCSLIGMNAGVMAQYIEFVADRLLGSLGYGKNYGTQNPFDWMDLISLQGKTNFFEKRVGEYQKAGVMGGSGGPGEDRRNFRLDADF 744
            RF  +VQ+ EAR FYGFQIA+E+IH EMY+LLL+TYIKD  E+DHLF A   IPCV +KADWA+RWI    TFAERLVAFA VEG+FFSGSFCAIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC L+  L N+ S E V  IV++AV++E+ F+C ALPC+L+GMN  +M+QYIEFVADRLLG+LG+GK Y   NPFDWM+LISLQGKTNFFEKRVGEYQKA VM    G G +   F++D DF
Sbjct:   86 RFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSSEKDHLFRAVETIPCVAKKADWALRWIDGSETFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYGLLRNRLSEERVRGIVRDAVDIEREFVCDALPCALVGMNGDLMSQYIEFVADRLLGALGHGKMYNVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHV-FKMDEDF 330
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10653.519.1 vs. uniprot
Match: M4EVZ6_BRARP (Uncharacterized protein n=4 Tax=Brassica TaxID=3705 RepID=M4EVZ6_BRARP)

HSP 1 Score: 366 bits (939), Expect = 1.130e-124
Identity = 173/247 (70.04%), Postives = 200/247 (80.97%), Query Frame = 1 
Query:    7 RFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQERDHLFNAYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFASLENKPSRETVMAIVKEAVEVEKSFICGALPCSLIGMNAGVMAQYIEFVADRLLGSLGYGKNYGTQNPFDWMDLISLQGKTNFFEKRVGEYQKAGVMGGSGGPGE-DRRNFRLDADF 744
            RF  +VQ+ EAR FYGFQIA+E+IH EMY+LLLDTYIKD +ERDHLF A   IPCV +KA WA++WI    TFAER+VAFA VEG+FFSGSFC+IFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC ++  L  K S E V +IV +AVE+E+ F+C ALPC+L+GMN  +M+QYIEFVADRLLG+LGYGK YG  NPFDWM+LISLQGKTNFFEKRVG+YQKA VM    G G  D   F LD DF
Sbjct:   86 RFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDTYIKDNKERDHLFRAIETIPCVAKKAQWALKWIDGSQTFAERIVAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLIYTLLRTKLSEERVKSIVCDAVEIEREFVCDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVANPFDWMELISLQGKTNFFEKRVGDYQKASVMSSVNGNGAFDNHVFSLDEDF 332
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10653.519.1 vs. uniprot
Match: A0A067DYP7_CITSI (Uncharacterized protein n=6 Tax=rosids TaxID=71275 RepID=A0A067DYP7_CITSI)

HSP 1 Score: 365 bits (937), Expect = 2.050e-124
Identity = 172/246 (69.92%), Postives = 201/246 (81.71%), Query Frame = 1 
Query:    7 RFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQERDHLFNAYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFASLENKPSRETVMAIVKEAVEVEKSFICGALPCSLIGMNAGVMAQYIEFVADRLLGSLGYGKNYGTQNPFDWMDLISLQGKTNFFEKRVGEYQKAGVMGGSGGPGEDRRNFRLDADF 744
            RF +EVQ+ EAR FYGFQIA+E+IH EMY+LLL+TYIK+  E+  LF A+  +PCV +KADWA+ WI    TFAERL+AFA VEG+FFSGSFCAIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC L++ L NK S E V  IVKEAVE+E+ F+C ALPC+L+GMN  +M+QYIEFVADRLLG+LG GK YG  NPFDWM+LISLQGKTNFFEKRVGEYQKA VM    G G +   F++D DF
Sbjct:   85 RFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKGIVKEAVEIEREFVCDALPCALVGMNGALMSQYIEFVADRLLGALGCGKVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHV-FKMDEDF 329
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10653.519.1 vs. uniprot
Match: A0A328CXI7_9ASTE (Uncharacterized protein n=6 Tax=lamiids TaxID=91888 RepID=A0A328CXI7_9ASTE)

HSP 1 Score: 365 bits (936), Expect = 3.010e-124
Identity = 171/246 (69.51%), Postives = 201/246 (81.71%), Query Frame = 1 
Query:    7 RFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQERDHLFNAYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFASLENKPSRETVMAIVKEAVEVEKSFICGALPCSLIGMNAGVMAQYIEFVADRLLGSLGYGKNYGTQNPFDWMDLISLQGKTNFFEKRVGEYQKAGVMGGSGGPGEDRRNFRLDADF 744
            RF +EVQ+ EAR FYGFQIA+E+IH EMY+LLL+TYIKD  E+D LF+A + IPCV++KA WA+RWI    +FAERL+AFA VEG+FFSGSFCAIFWLKKRGLMPGL FSNE+ISRDEGLHCDFAC L+  L+ K S E V AI+ +AVE+E+ F+C ALPC+L+GMN  +M+QYIEFVADRLLG+LG  K Y  QNPFDWM+LISLQGKTNFFEKRVGEYQKA VM    G G D   F+LD DF
Sbjct:   85 RFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSAEKDRLFHAIDTIPCVEKKAKWALRWIDGSESFAERLLAFACVEGIFFSGSFCAIFWLKKRGLMPGLAFSNELISRDEGLHCDFACMLYGLLKRKLSEERVKAIIADAVEIEREFVCDALPCALVGMNGNLMSQYIEFVADRLLGALGCSKLYNVQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGFDAHVFKLDEDF 330
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10653.519.1 vs. uniprot
Match: UPI001BFAC3A7 (ribonucleoside-diphosphate reductase small chain-like n=2 Tax=fabids TaxID=91835 RepID=UPI001BFAC3A7)

HSP 1 Score: 365 bits (936), Expect = 3.010e-124
Identity = 168/246 (68.29%), Postives = 202/246 (82.11%), Query Frame = 1 
Query:    7 RFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQERDHLFNAYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWLKKRGLMPGLTFSNEMISRDEGLHCDFACQLFASLENKPSRETVMAIVKEAVEVEKSFICGALPCSLIGMNAGVMAQYIEFVADRLLGSLGYGKNYGTQNPFDWMDLISLQGKTNFFEKRVGEYQKAGVMGGSGGPGEDRRNFRLDADF 744
            RF +EVQ+ EAR FYGFQIA+E+IH EMY+LLL+TYIKD  ++  LF+A   +PCV +KA WA+RWI    +FAER+VAFA VEG+FFSGSFCAIFWLKKRGLMPGLTFSNE+ISRDEGLHCDFAC L++ L+ K S + +  IV++AV++E+ F+C ALPC+L+GMN  +M+QYIEFVADRLLG+LGYGK Y  QNPFDWM+LISLQGKTNFFEKRVGEYQKA VM    G G D   F+LD DF
Sbjct:   85 RFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSAQKHRLFHAIETVPCVAKKAQWALRWIDGSESFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLKKKLSEQRIKGIVRDAVDIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKIYNVQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGDNHVFKLDEDF 330
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10653.519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G418_ECTSI2.240e-17697.98Ribonucleoside-diphosphate reductase small chain n... [more]
A0A835YXN6_9STRA1.470e-13074.60Ferritin-like superfamily n=1 Tax=Tribonema minus ... [more]
RIR2C_ARATH1.960e-12570.45Ribonucleoside-diphosphate reductase small chain C... [more]
A0A7J6X3S5_THATH3.050e-12569.51Ribonucleoside-diphosphate reductase small chain n... [more]
A4S0Z8_OSTLU3.560e-12570.33Uncharacterized protein n=3 Tax=Ostreococcus TaxID... [more]
UPI000B8D18F57.420e-12569.92ribonucleoside-diphosphate reductase small chain C... [more]
M4EVZ6_BRARP1.130e-12470.04Uncharacterized protein n=4 Tax=Brassica TaxID=370... [more]
A0A067DYP7_CITSI2.050e-12469.92Uncharacterized protein n=6 Tax=rosids TaxID=71275... [more]
A0A328CXI7_9ASTE3.010e-12469.51Uncharacterized protein n=6 Tax=lamiids TaxID=9188... [more]
UPI001BFAC3A73.010e-12468.29ribonucleoside-diphosphate reductase small chain-l... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10653contigE-fasciculatus_F_contig10653:1723..4547 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score506.5
Seed ortholog evalue7e-141
Seed eggNOG ortholog2880.D7G418
Preferred nameRNR2
KEGG rclassRC00613,RC01003
KEGG koko:K10808
KEGG ReactionR02017,R02019,R02024,R08363,R08364,R11893
KEGG Pathwayko00230,ko00240,ko00480,ko00983,ko01100,ko04115,map00230,map00240,map00480,map00983,map01100,map04115
KEGG ModuleM00053
GOsGO:0003674,GO:0003824,GO:0004748,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006240,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009147,GO:0009148,GO:0009165,GO:0009185,GO:0009186,GO:0009189,GO:0009193,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009215,GO:0009216,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0032991,GO:0034641,GO:0034654,GO:0042278,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046062,GO:0046131,GO:0046385,GO:0046483,GO:0046704,GO:0051063,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0072521,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1902494,GO:1990204
EggNOG free text desc.ribonucleoside-diphosphate reductase activity
EggNOG OGsCOG1678@1,KOG1567@2759
Ec32 ortholog descriptionRibonucleotide reductase
Ec32 orthologEc-19_000440.1
EC1.17.4.1
COG Functional cat.K
BiGG ReactioniMM904.YGR180C,iMM904.YJL026W,iND750.YGR180C,iND750.YJL026W
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03400
Hectar predicted targeting categoryother localisation
Exons6
Model size747
Cds size747
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10653.519.1prot_E-fasciculatus_F_contig10653.519.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10653 1723..4547 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927563.5318408-CDS-E-fasciculatus_F_contig10653:1722..18901622927563.5318408-CDS-E-fasciculatus_F_contig10653:1722..1890Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10653 1723..1890 -
1695995597.7978852-CDS-E-fasciculatus_F_contig10653:1722..18901695995597.7978852-CDS-E-fasciculatus_F_contig10653:1722..1890Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10653 1723..1890 -
1622927563.5423083-CDS-E-fasciculatus_F_contig10653:2281..23801622927563.5423083-CDS-E-fasciculatus_F_contig10653:2281..2380Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10653 2282..2380 -
1695995597.8128934-CDS-E-fasciculatus_F_contig10653:2281..23801695995597.8128934-CDS-E-fasciculatus_F_contig10653:2281..2380Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10653 2282..2380 -
1622927563.5522544-CDS-E-fasciculatus_F_contig10653:2803..30251622927563.5522544-CDS-E-fasciculatus_F_contig10653:2803..3025Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10653 2804..3025 -
1695995597.8215058-CDS-E-fasciculatus_F_contig10653:2803..30251695995597.8215058-CDS-E-fasciculatus_F_contig10653:2803..3025Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10653 2804..3025 -
1622927563.5641687-CDS-E-fasciculatus_F_contig10653:3195..32691622927563.5641687-CDS-E-fasciculatus_F_contig10653:3195..3269Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10653 3196..3269 -
1695995597.8305318-CDS-E-fasciculatus_F_contig10653:3195..32691695995597.8305318-CDS-E-fasciculatus_F_contig10653:3195..3269Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10653 3196..3269 -
1622927563.5736802-CDS-E-fasciculatus_F_contig10653:3832..39271622927563.5736802-CDS-E-fasciculatus_F_contig10653:3832..3927Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10653 3833..3927 -
1695995597.8397038-CDS-E-fasciculatus_F_contig10653:3832..39271695995597.8397038-CDS-E-fasciculatus_F_contig10653:3832..3927Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10653 3833..3927 -
1622927563.5830135-CDS-E-fasciculatus_F_contig10653:4458..45471622927563.5830135-CDS-E-fasciculatus_F_contig10653:4458..4547Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10653 4459..4547 -
1695995597.8489869-CDS-E-fasciculatus_F_contig10653:4458..45471695995597.8489869-CDS-E-fasciculatus_F_contig10653:4458..4547Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10653 4459..4547 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10653.519.1

>prot_E-fasciculatus_F_contig10653.519.1 ID=prot_E-fasciculatus_F_contig10653.519.1|Name=mRNA_E-fasciculatus_F_contig10653.519.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=249bp
VERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQERDHLFN
AYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWL
KKRGLMPGLTFSNEMISRDEGLHCDFACQLFASLENKPSRETVMAIVKEA
VEVEKSFICGALPCSLIGMNAGVMAQYIEFVADRLLGSLGYGKNYGTQNP
FDWMDLISLQGKTNFFEKRVGEYQKAGVMGGSGGPGEDRRNFRLDADF*
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mRNA from alignment at E-fasciculatus_F_contig10653:1723..4547-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10653.519.1 ID=mRNA_E-fasciculatus_F_contig10653.519.1|Name=mRNA_E-fasciculatus_F_contig10653.519.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2825bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10653:1723..4547- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTGGAGAGGTTCAGCCAGGAGGTGCAGCTCCCCGAGGCCCGGTGTTTCTA
CGGCTTCCAGATCGCAATGGAGTCGATCCACCAGGAGATGTAAGTCGCAG
AGACAACAAAAAACCCCGTCAAACGCTCCACCCACGGTTTTTGCATGCAA
CAACATTTGCGGCCAGCAACTGATGGCCTATGTGCAACATCACGGGAAGT
TGATGCAATCACGAGTCGAATCCCGTCAAGTCGTTGCGAAGCACGAAGCA
CTTTTTCGACAAAACAAGCACTGCTTCGCGCAAAATCACCTGGGGCTGTC
GAATGTCTCGGGCACGTTTCCCGTGGACCCTCTTGTCGCTAATTTTCCCC
GCCCTTTAGCTTTTTGTTCAGATCTTTGAAACGAGTGTTTGTTGTTGGCA
TTTTTTCCCGTAGTACGTGCCTCGTAATCGACCATCTCCTGGTTGGATAT
TTGCTTGCGAACGCCGTGTTGCTTCTCTAGTTTGCGCCCTTCATCCGTAT
GCATACAGTACGGCTCTCGACGCTACGAAAATTCAAATGTTGACTCGACA
CCTCTCTCTCTTTCGCCCCATGGGTGACGGACGTGGATGACCCGCTTCAT
TCGGTTTTGGAAATTCGAAGGTACGCTCTGCTCCTGGACACGTACATCAA
GGACAAGCAGGAGCGAGATCACCTCTTCAACGCCTACAACGACATCCCTT
GCGTCAAGCAAAAAGGTCGGTCGGTCGGGAACCCGCAGCTGAATTTTGGA
CATGACGACGGCAGCTGCAACAGCTGCCCATATCAACACACAGAGATACC
GCTTTACGAAGCAACAAGCACAGACATGCCTTCACTGCACTGAACAGGCG
ATGTGATCTGTTTTGAGAGGTGGAAGAAGCAGCCGTGTGCGAAACGAGGC
AGCTTCGATTTCGCCGGTCCGTCTCTGGTGTTTTTTTTCTCTACAAACGC
AACCTCTGAAGTACATCGGCTAGGCAGACGTACATGGGCAAAGAGTAGGT
GTTCATCACTCTATACAAGGGGAAGTCTACGTTTTTTGCTGCCACAGAGG
TGCTTGATTGTGGCTGTCAGGTTGCGGCATGATGTTTGCGACGAAGCCGG
TGACGCGAAGCCCTGACTCAATCCCCCACCATCCGCTGTGGGAATATTGT
ACTCCGACCTGTTTCGGCGTTGCTTTTTTCGTTCGACTTACATGTGCAAC
CACCACGCGCATGCACGCTTCTGCCGGTCGCTCTTCGTGCCTGTTCGTTG
GTTTGTACGATCGTATTTGTCCGTGCAGCCGACTGGGCGATGAGGTGGAT
CGGCAGCGACGCCACTTTCGCCGAGAGGCTAGTCGCCTTCGCTGCGGTAG
AGGTGAGCGCTTTCTAAGACAAAAAGTAAGGATGATTGCATGCACCATTG
ATTGATATCGTGAATATTAATATTTGTTTTCCCGTCTTGCAAATGTCTTG
ACCTCCGTGTTGAGCACAGAACGCTTTCTTCTTTTACTAACCCCCGTGGG
TTCCCTTTTGTTGTATTGTCAGGGTGTCTTCTTCTCGGGAAGCTTTTGCG
CGATCTTCTGGCTGAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCTCC
AACGAGATGATCTCGCGCGACGAGGGGCTGCACTGCGACTTCGCCTGCCA
GCTGTTCGCCTCCCTCGAGAACAAGCCCAGCCGGGAGACGGTGATGGCCA
TCGTCAAGGAGGCCGTAGAGGTCGAGAAGAGCTTCATCTGTGGGGTGAGA
TACGATGAGATAAGGGAGGGATTGACGCGATGGGGTCCTGTTGTGTTTGT
AAAGGGGTGGGCTGCCAGGGCCGACATGTCGGTCACGATTGCGCCGCTTT
TGTCTGTCTTGGGCCAGTCGTCTTGTCGAAAAACATTTCCTCGCGAAAGC
AAAATCTTGGTACATAGCCCCGCGGCCCCTGCTTGTTGCGCCATTGCCAT
CACAGCAAATGATGTTACCTGCCGCTCCGCTTCTTTCCTCCGCTACGGTA
ACCCGTCGCCTCACGGTCACGTCACGGTTCTCGTTTGACTGTCGTGCGTA
CTCCTTTGACCCGTCGCACGTCTTTTTTCGATCGTTTCCCCCGATCGTGT
CGTGGCGCCATGATTGTCGTCCTGTGGTATCGTTCTTCTGGCATGTTGGT
TGTCAACGTCGTGCCAGGCCCTTCCTTGCAGCCTCATCGGCATGAACGCG
GGCGTGATGGCGCAGTATATCGAGTTCGTGGCGGACCGGCTGCTGGGATC
TCTCGGATACGGCAAGGTGCGGTACAACTGTAGCAGGCTGCTGCCAAATA
CCGCGCACGATTCAAGTTATTATTGCCTCTAAAATCCACGGCTAGGTTTG
CGACTGCCATGTTGTGATGTGCATGCGGTTACGGAAACGTAAGTCGCGGT
ATCGAAATAAACTATTCGGAATCACACGCCTCCGTTCTTTTCCCAAACAA
GACCACTTTGACGTGGTCGTCGTGATTTCCACAACATCAGAAGCAGTTCC
ACCCGGCATGCTGGCGGTGAATGTGCAACGAGTCTATGATTTCACTCACC
TTCTGGAGACGTAAATTTGTTCCTCCGTGGGCGTTGCCACGGGAGTTGTT
GAAACAGAAAGAATAACGAGAACAAATTGGTTGTCCCGTTTTTCCCGCAA
TTTTCAGAACTACGGGACGCAAAACCCGTTCGACTGGATGGACCTCATCA
GCCTGCAGGGGAAGACAAATTTCTTCGAGAAGAGGGTGGGGGAGTACCAG
AAGGCGGGAGTGATGGGGGGTAGCGGGGGGCCCGGGGAGGACAGACGTAA
CTTTCGATTGGACGCTGACTTTTAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10653:1723..4547-

>mRNA_E-fasciculatus_F_contig10653.519.1 ID=mRNA_E-fasciculatus_F_contig10653.519.1|Name=mRNA_E-fasciculatus_F_contig10653.519.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1494bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10653:1723..4547- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTGGAGAGGTTCAGCCAGGAGGTGCAGCTCCCCGAGGCCCGGTGTTTCTA
CGGCTTCCAGATCGCAATGGAGTCGATCCACCAGGAGATGTGGAGAGGTT
CAGCCAGGAGGTGCAGCTCCCCGAGGCCCGGTGTTTCTACGGCTTCCAGA
TCGCAATGGAGTCGATCCACCAGGAGATGTACGCTCTGCTCCTGGACACG
TACATCAAGGACAAGCAGGAGCGAGATCACCTCTTCAACGCCTACAACGA
CATCCCTTGCGTCAAGCAAAAAGGTACGCTCTGCTCCTGGACACGTACAT
CAAGGACAAGCAGGAGCGAGATCACCTCTTCAACGCCTACAACGACATCC
CTTGCGTCAAGCAAAAAGCCGACTGGGCGATGAGGTGGATCGGCAGCGAC
GCCACTTTCGCCGAGAGGCTAGTCGCCTTCGCTGCGGTAGAGCCGACTGG
GCGATGAGGTGGATCGGCAGCGACGCCACTTTCGCCGAGAGGCTAGTCGC
CTTCGCTGCGGTAGAGGGTGTCTTCTTCTCGGGAAGCTTTTGCGCGATCT
TCTGGCTGAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCTCCAACGAG
ATGATCTCGCGCGACGAGGGGCTGCACTGCGACTTCGCCTGCCAGCTGTT
CGCCTCCCTCGAGAACAAGCCCAGCCGGGAGACGGTGATGGCCATCGTCA
AGGAGGCCGTAGAGGTCGAGAAGAGCTTCATCTGTGGGGGTGTCTTCTTC
TCGGGAAGCTTTTGCGCGATCTTCTGGCTGAAGAAGCGTGGCCTCATGCC
CGGCCTGACCTTCTCCAACGAGATGATCTCGCGCGACGAGGGGCTGCACT
GCGACTTCGCCTGCCAGCTGTTCGCCTCCCTCGAGAACAAGCCCAGCCGG
GAGACGGTGATGGCCATCGTCAAGGAGGCCGTAGAGGTCGAGAAGAGCTT
CATCTGTGGGGCCCTTCCTTGCAGCCTCATCGGCATGAACGCGGGCGTGA
TGGCGCAGTATATCGAGTTCGTGGCGGACCGGCTGCTGGGATCTCTCGGA
TACGGCAAGGCCCTTCCTTGCAGCCTCATCGGCATGAACGCGGGCGTGAT
GGCGCAGTATATCGAGTTCGTGGCGGACCGGCTGCTGGGATCTCTCGGAT
ACGGCAAGAACTACGGGACGCAAAACCCGTTCGACTGGATGGACCTCATC
AGCCTGCAGGGGAAGACAAATTTCTTCGAGAAGAGGGTGGGGGAGTACCA
GAAGGCGGGAGTGATGGGGGGTAGCGGGGGGCCCGGGGAGGACAGACGTA
ACTTTCGATTGGACGCTGACTTTTAAAACTACGGGACGCAAAACCCGTTC
GACTGGATGGACCTCATCAGCCTGCAGGGGAAGACAAATTTCTTCGAGAA
GAGGGTGGGGGAGTACCAGAAGGCGGGAGTGATGGGGGGTAGCGGGGGGC
CCGGGGAGGACAGACGTAACTTTCGATTGGACGCTGACTTTTAA
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