mRNA_E-fasciculatus_F_contig10649.514.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10649.514.1
Unique NamemRNA_E-fasciculatus_F_contig10649.514.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10649.514.1 vs. uniprot
Match: D7FXQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXQ6_ECTSI)

HSP 1 Score: 264 bits (675), Expect = 1.820e-84
Identity = 151/179 (84.36%), Postives = 160/179 (89.39%), Query Frame = 1 
Query:   46 TMDAGEVPVAMGSAEGGDEAVTGAALADMLSGIGISDNASGNA-AXXXXXXXXXXXXXXXXXXXXDYVDGEENEVELPPEVMKRLYELKALQSEKDVIYEKYKAKRAELELEFAKEYGAIYSRRAEVVAGKSRDIDDPEPELGAQGEGGTGGEAAGGEVGVPHFWMQCMLHHEALHDVV 579
            TM AG+VPVAM SA+GGDE VTGAALA+MLSGIGISDNASG+A +             XXXXXXXDYVDGE+NEVELPPEVMKRLYELKALQSEKDVIY KYKAKRAELE+EFAKEYGAIYSRRAEVVAG+SRDIDDPEPELGAQGEGG GGEAAGGEVGVPHFWMQCMLHHEALHDV+
Sbjct:   45 TMGAGDVPVAMDSAQGGDE-VTGAALANMLSGIGISDNASGDAVSATPRSGGGQGVDQXXXXXXXDYVDGEDNEVELPPEVMKRLYELKALQSEKDVIYGKYKAKRAELEMEFAKEYGAIYSRRAEVVAGRSRDIDDPEPELGAQGEGGAGGEAAGGEVGVPHFWMQCMLHHEALHDVI 222
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10649.514.1 vs. uniprot
Match: A0A7S2V1Q3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Q3_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.230e-14
Identity = 41/113 (36.28%), Postives = 74/113 (65.49%), Query Frame = 1 
Query:  247 DGEENE--VELPPEVMKRLYELKALQSEKDVIYEKYKAKRAELELEFAKEYGAIYSRRAEVVAGKSRDIDDPEPELGAQGEGGTGGEAAGGEVGVPHFWMQCMLHHEALHDVV 579
            D EE++  +++PP V +R+  LK LQ  ++V+ E+Y+ +RAELE +F +EY  ++ +RA++VAG+   +D  +PE   + EG    E     +G+P FW+  +LH+E++ D++
Sbjct:   94 DPEEDDGTMQIPPSVYRRILALKELQDAREVVQERYRRERAELEAKFRQEYEPLFIKRADIVAGR---LDVQKPEPAPESEGADAEEEGDDVMGIPQFWLMVLLHNESVVDLI 203
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10649.514.1 vs. uniprot
Match: A0A836CG27_9STRA (Nucleosome assembly protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG27_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.720e-12
Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = 1 
Query:  238 DYVDGEENE-VELPPEVMKRLYELKALQSEKDVIYEKYKAKRAELELEFAKEYGAIYSRRAEVVAGKSRDIDDPEPELGAQGEGGTGGEAAGGEV-GVPHFWMQCMLHHEALHDVV 579
            D  D E+ + V LP  V++R+  LK LQ ++D IYE+YKA R  LE E+ K Y  +Y  R ++V+G +++++  E E G   E    G   G +V GVP FW   M+ HEAL D++
Sbjct:   47 DVYDAEDGDRVVLPHSVLRRIDALKDLQGKRDDIYEEYKAARRVLEAEYRKRYDVLYQERCDIVSG-NKEVEKTESEAGDDEE--AHGADQGEDVKGVPSFWANAMIRHEALQDLI 159
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10649.514.1 vs. uniprot
Match: A0A8J5H9B1_ZINOF (Uncharacterized protein n=6 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5H9B1_ZINOF)

HSP 1 Score: 55.5 bits (132), Expect = 1.090e-5
Identity = 43/117 (36.75%), Postives = 61/117 (52.14%), Query Frame = 1 
Query:  244 VDGEENEVELP---PEVMKRLYELKALQSEKDVIYEKYKAKRAELELEFAKEYGAIYSRRAEVVAGKSRDIDDPEPELGAQGEGGTGGEAAGG--EVGVPHFWMQCMLHHEALHDVV 579
            +D E++EVEL    P V KR+  L+ +QS  D +  K+  +R  LE ++ K YGA+YS+R E+V G             A+ EG T   A     E GVP FW+  M  +E L D +
Sbjct:  102 IDAEKDEVELETLSPIVRKRVEVLREIQSRHDALEAKFFEERTALEDKYQKLYGALYSKRYEIVNGI------------AEVEGITNESATNSSEEKGVPGFWLNAMNQNELLVDEI 206
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10649.514.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FXQ6_ECTSI1.820e-8484.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V1Q3_9STRA2.230e-1436.28Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CG27_9STRA1.720e-1240.52Nucleosome assembly protein-domain-containing prot... [more]
A0A8J5H9B1_ZINOF1.090e-536.75Uncharacterized protein n=6 Tax=Zingiber officinal... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10649contigE-fasciculatus_F_contig10649:403..4459 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score266.5
Seed ortholog evalue9.5e-69
Seed eggNOG ortholog2880.D7FXQ6
Preferred nameNAP1L1
KEGG rclassRC00055,RC00523
KEGG koko:K01890,ko:K10357,ko:K11279,ko:K11280,ko:K11281,ko:K11282,ko:K11283,ko:K11290,ko:K11405
KEGG ReactionR03660
KEGG Pathwayko00970,ko05034,ko05165,ko05203,map00970,map05034,map05165,map05203
KEGG ModuleM00359,M00360
GOsGO:0000003,GO:0000228,GO:0000723,GO:0000785,GO:0000790,GO:0002376,GO:0002520,GO:0003006,GO:0003008,GO:0003674,GO:0003682,GO:0005488,GO:0005496,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005739,GO:0005829,GO:0005856,GO:0005933,GO:0005935,GO:0005938,GO:0005940,GO:0006139,GO:0006259,GO:0006260,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006336,GO:0006337,GO:0006338,GO:0006355,GO:0006357,GO:0006606,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0006997,GO:0007114,GO:0007117,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007289,GO:0007338,GO:0007399,GO:0007610,GO:0007611,GO:0007613,GO:0007617,GO:0007618,GO:0007619,GO:0008047,GO:0008049,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0008284,GO:0008289,GO:0009058,GO:0009059,GO:0009566,GO:0009719,GO:0009725,GO:0009790,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010638,GO:0010720,GO:0014009,GO:0014010,GO:0015031,GO:0015485,GO:0015833,GO:0016006,GO:0016043,GO:0017038,GO:0019098,GO:0019219,GO:0019222,GO:0019899,GO:0019900,GO:0019953,GO:0019954,GO:0022008,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0030097,GO:0030154,GO:0030234,GO:0030332,GO:0030425,GO:0030427,GO:0030447,GO:0030448,GO:0031056,GO:0031058,GO:0031110,GO:0031112,GO:0031113,GO:0031116,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0031399,GO:0031401,GO:0031491,GO:0031497,GO:0031498,GO:0031974,GO:0031981,GO:0032156,GO:0032168,GO:0032200,GO:0032268,GO:0032270,GO:0032271,GO:0032273,GO:0032501,GO:0032502,GO:0032504,GO:0032505,GO:0032784,GO:0032786,GO:0032870,GO:0032886,GO:0032934,GO:0032968,GO:0032984,GO:0032986,GO:0033036,GO:0033043,GO:0033044,GO:0033365,GO:0034243,GO:0034504,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034724,GO:0034728,GO:0035039,GO:0035041,GO:0035065,GO:0035066,GO:0035092,GO:0035162,GO:0036094,GO:0036477,GO:0040007,GO:0042063,GO:0042127,GO:0042221,GO:0042393,GO:0042592,GO:0042802,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043085,GO:0043170,GO:0043178,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043434,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044297,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044454,GO:0044463,GO:0044464,GO:0044703,GO:0044877,GO:0045184,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046907,GO:0048232,GO:0048468,GO:0048513,GO:0048515,GO:0048518,GO:0048522,GO:0048534,GO:0048568,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050877,GO:0050890,GO:0050896,GO:0051082,GO:0051094,GO:0051128,GO:0051130,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051276,GO:0051301,GO:0051302,GO:0051493,GO:0051495,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0051960,GO:0051962,GO:0060179,GO:0060215,GO:0060249,GO:0060255,GO:0060284,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070507,GO:0070727,GO:0070887,GO:0070925,GO:0071103,GO:0071310,GO:0071375,GO:0071417,GO:0071440,GO:0071442,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071824,GO:0071840,GO:0071944,GO:0072594,GO:0080090,GO:0090304,GO:0097159,GO:0097447,GO:0097458,GO:0098772,GO:0099568,GO:0120025,GO:0120038,GO:1901360,GO:1901576,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901983,GO:1901985,GO:1902275,GO:1902680,GO:1902903,GO:1902905,GO:1903506,GO:1903508,GO:1905269,GO:2000026,GO:2000035,GO:2000112,GO:2000615,GO:2000617,GO:2000756,GO:2000758,GO:2001141,GO:2001252
EggNOG free text desc.Belongs to the nucleosome assembly protein (NAP) family
EggNOG OGsKOG1507@1,KOG1507@2759
EC3.5.1.98,6.1.1.20
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03019,ko03029,ko03036,ko04131,ko04812
Ec32 ortholog descriptionNucleosome assembly protein (NAP)
Ec32 orthologEc-28_001750.1
Exons6
Model size585
Cds size585
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10649.514.1prot_E-fasciculatus_F_contig10649.514.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10649 403..4459 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927562.530638-CDS-E-fasciculatus_F_contig10649:402..5051622927562.530638-CDS-E-fasciculatus_F_contig10649:402..505Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10649 403..505 +
1695995597.3625224-CDS-E-fasciculatus_F_contig10649:402..5051695995597.3625224-CDS-E-fasciculatus_F_contig10649:402..505Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10649 403..505 +
1622927562.5449626-CDS-E-fasciculatus_F_contig10649:2147..22101622927562.5449626-CDS-E-fasciculatus_F_contig10649:2147..2210Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10649 2148..2210 +
1695995597.3738768-CDS-E-fasciculatus_F_contig10649:2147..22101695995597.3738768-CDS-E-fasciculatus_F_contig10649:2147..2210Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10649 2148..2210 +
1622927562.5570204-CDS-E-fasciculatus_F_contig10649:2657..27431622927562.5570204-CDS-E-fasciculatus_F_contig10649:2657..2743Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10649 2658..2743 +
1695995597.3825138-CDS-E-fasciculatus_F_contig10649:2657..27431695995597.3825138-CDS-E-fasciculatus_F_contig10649:2657..2743Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10649 2658..2743 +
1622927562.5692472-CDS-E-fasciculatus_F_contig10649:3117..31981622927562.5692472-CDS-E-fasciculatus_F_contig10649:3117..3198Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10649 3118..3198 +
1695995597.3937085-CDS-E-fasciculatus_F_contig10649:3117..31981695995597.3937085-CDS-E-fasciculatus_F_contig10649:3117..3198Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10649 3118..3198 +
1622927562.5803246-CDS-E-fasciculatus_F_contig10649:3569..36871622927562.5803246-CDS-E-fasciculatus_F_contig10649:3569..3687Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10649 3570..3687 +
1695995597.4024234-CDS-E-fasciculatus_F_contig10649:3569..36871695995597.4024234-CDS-E-fasciculatus_F_contig10649:3569..3687Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10649 3570..3687 +
1622927562.5928638-CDS-E-fasciculatus_F_contig10649:4325..44591622927562.5928638-CDS-E-fasciculatus_F_contig10649:4325..4459Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10649 4326..4459 +
1695995597.4103158-CDS-E-fasciculatus_F_contig10649:4325..44591695995597.4103158-CDS-E-fasciculatus_F_contig10649:4325..4459Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10649 4326..4459 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10649.514.1

>prot_E-fasciculatus_F_contig10649.514.1 ID=prot_E-fasciculatus_F_contig10649.514.1|Name=mRNA_E-fasciculatus_F_contig10649.514.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=195bp
SAPPPPPPPXXXXVRTMDAGEVPVAMGSAEGGDEAVTGAALADMLSGIGI
SDNASGNAAAARGGGGQDVDEDDDDDDDEDYVDGEENEVELPPEVMKRLY
ELKALQSEKDVIYEKYKAKRAELELEFAKEYGAIYSRRAEVVAGKSRDID
DPEPELGAQGEGGTGGEAAGGEVGVPHFWMQCMLHHEALHDVVW*
back to top

mRNA from alignment at E-fasciculatus_F_contig10649:403..4459+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10649.514.1 ID=mRNA_E-fasciculatus_F_contig10649.514.1|Name=mRNA_E-fasciculatus_F_contig10649.514.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4057bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10649:403..4459+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TCTGCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNTGTTAGGACGAT
GGACGCAGGGGAGGTCCCCGTGGCAATGGGCTCTGCTGAAGGTGGAGACG
AAGGTGAGACGCGGGGATGTTGGGAGTCGAATCAGACGGAACCAGATCCG
GCACGGAATACTACCAGCTGCGAGCCCCCCAAGATACTTGGAATCGGTAC
GCCCGTTGGCACTTGTCTCTTCGAACAACCAAAACCTCTCAAAAGAACGC
TATAATAGAGGACAGGAAACAATGAAGGTAGCTAGGCAGGTAGGTAGGTA
CCCACGTGTTAGCACTACGGGCCCCGCGCTTGTGGTATTGTACTTTTGTA
TTTTTTGGACGATTCGCTCAACAAGCCGAGTGTGATCAATCAATGACTAC
TGTGATACATTTCATTCTTTGGACGATTTTTTGCTGAAGCCCGAGTGTGA
TGTGACCAATGCTGCCTCAAGACTGGTCGATACAGAATCAAGAAATCATT
GTACCGTACAGCAGTACCAGTACCGAGGGCACGCAAGATACCACACCCCC
TGAAAATACCACACCGTCTGGACTGCTTTTCAATGCTTGGTTGCTCTGCA
GCACAGGCATATAATGATGGTGCCGAAGACGGTAACATCGCCTCGTTGAA
AACGTTGGGAAAACCGTAGCGTGTGGGTTTGGTATCCCCTTGATGGTGGA
GTACGTAGCCGAGCTGCTTTGAAATTCGGTCAAGGGGAGTGTGGTGTCTT
GCTCAAGAAACGGTGCGTGGGGCCGTCGCAACCTTCTTCGGGATTCTCCT
GGAAAATGGCCTCGCCCTGAATAGTCCCAGTATCGGTTCCGATCACTCTT
TGCTAAGAACCCACGGCGATCTTTGCGCTGCATCCAGTGCTATGTAGCTC
TCCGTTTTCGAGTTTTGTAGAGATGCGGGATTCTGCGAAATGCATGGTGT
CGAGTCCCCCCCCCCCCCCCCCCCCCCTCTTTATTCCGGGAAAGCTCATT
TGTCGCGCGGTTGCGTCAGCGCAAGAGGACAAGCGCTTTGTATTCTCCAA
GGCACATGAATGCATGAACGAACCAAGTACTTGCGTAAGTTCTTGCATCG
TTATCAGCCTTGGTACCTTTTACCTTCCACACGTGGGATAGACCAGATCC
CCACAGATCGAGCTAGCTATTTGGAAGGGTTATGTCCCCTGTGATCGGTA
GGAGACAAGTGATCGGGGTTCCACGGTGATCTGAAAGAAATGGGTGATCG
GGGTATTTGTGTCCGAGGCGATCTGAAGGACTTCGATGATGGGGGTAGGT
TTGCTCCATGGTGATGTGTAAGACATGGGTGGGCTACCTCATGATCTATT
TTATGTGTATTCACATCCCCTACCGTTGACAAAACGGGCTTGGTTCAACT
TCCACATAGGGGGGGTAAAGCGGGGGACACTATTTGGTATTGCCATGAAA
GCCAGGCTGTATTGACTGGACTCACTGATACTACAGACCAATGTCTCGCT
GGCTATCGTCCCCTCCAGTACCCCGTGATTGTTTGGATGCTATATTGTAA
CATCAGATGCGTTCCTGTCTTGACCCCCCTTCCCCCCCCCCCCCCCCCTG
CAGCAGTCGGGCCGCATGTACTACACCCCGTTTCTCGTTGTTGCCGTCGT
CTGGTCACGCTCACTTAACTCGTATGTACGGCATTGTGACTTTTTTTGTT
TTGTTTCCGGTGCCTCACTTTTTTCTTGTTTCTTGTTTCTTGGAGCAGTG
ACCGGTGCTGCTTTGGCCGACATGCTGTCGGGCATCGGTATCAGCGACAA
CGCCTCAGGTGTGCAGGCAACTTGCTGGCGGGAGGTTGATTTAGGTGTAC
ACATCCCGCCGCCGTGGCTATATCCCTACTGCTGCTGCTGCTGCTGCTGC
GCGAGTTACCTCCCTCCCTTGTGGAACCCTTTCCCTTGTCGGACCCTTCC
CTCTTCTCCCCTTAAGGTCGAAGCCATGAGCCCATGTTAACCCTACGCTG
CTGCGCGAGTTGCTTACCTCCCGTACAATACCCTTTGTGCATCTCGACGT
GAGACCCTTTCTCGCGTCAAGGTGGAAGCCACGAGAGCTCCTGCGAGGAA
GGTCTTTGCGAGAGAAGGTTGAGAGACGTCCAACCCTTTGCGTTGTGACT
GGTGCCAGCGCTTTCCCCGGGAAGGGGGGACGAAAGAAACAAGGCGAAAC
AAGCCATCCTCTCTCCTTCCCTTCCTGTCGTGTTGTCCTTTACTTTTGAC
AACAGGGAACGCGGCGGCTGCCCGGGGTGGCGGGGGGCAGGACGTGGACG
AAGACGACGACGATGATGATGACGAGGACTATGTAGATGGGGTAAGAGGG
GAGCTGTGTGTTGATGAGAGGGAGTACCAGGATGGTGAAGGAGTGTTGAG
AGGCTGGGTATCGTGATGAGGCGTGTGTTGTGGACTCATTTTGCGAGGGA
GAGGCAAGGGGCGAGGAGAATGGAGCGTCGAAGAAAGAGCGAGACAAGAT
TACGTAAACATGCGGGGTAGATTGAGCGATGGTTATGTGGGGAAAATGTC
TACAGAAGAGCGAAGAATATGAAGAACTGTAAGTGAGCACGGGGGTGAGG
TATCGTCAGACGCATGGTAGGTGTAGGCATTCTCCACCCAAAGCCGAAGA
AGTGGACTTAATCCGTCTCCCCCACCACACACCGCGCACGCTTTGATGTG
ACTGACTGTGTGCAGGAGGAGAACGAGGTAGAGCTACCGCCAGAAGTGAT
GAAGAGGCTGTACGAGCTTAAGGCCCTCCAGTCAGAGAAGGACGTGGTGA
GTGCTGGACACCATTCTTTCACTGCTGCTGCTGCGGCTGCTGCCGCCGCG
CCTGTCTTTGTAGCGTGGGTGCGCGGCCGAGAACCCATGGACTACAAACC
AAGCGACAAAATATGAGTGCACCATTGCTTCTGGTGTGTCCATCCTCATG
AAGCGTAGCCTGGGCCGGCGAGAACCCGGCATATCGCTCGGTCCCGACTT
TGTAGGGATGCGAGGTCTATGGTCTATAACGACTACGGCATGCATTTACA
TGAGTACTCCCCCACACACACACCCTTTCGCGTGGTCAATGGTCTAACCG
CTAAGGCATGCATGCAAAACATGAGAGTACGCTCTCCCCCCACCCCCGTA
CCAACCGCCTTCCCAAGATTTACGAAAAGTACAAGGCGAAGCGCGCTGAG
TTGGAGCTGGAATTTGCCAAGGAGTACGGGGCGATCTACAGCCGCCGGGC
GGAGGTGGTGGCGGGAAAGTCGAGGGATATAGACGGTACGGCGAGGGAGG
AAAGGGGGGAAGAGGACACACGCGTGAATGTCTGGAAGGCGGATAAACGA
AAAGAGGACCACGATCTTAGCAAGAGTGGCTCATGCGAGAATTGAAAAAC
ATGAGGATCACGAATCAATCCGGACGATTATTTCGCTCCTGGCAGCGCGG
GGGTGGGGGCGGGGGGNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGTTACAAGTTCTTGCGACGTGTAGCGGTGTGCACTTAGGACA
GCACGGAGTGGCAAAGGGACTTGTAGCGCGAGGGGGGGGGGCGTACACGC
GGAACAAGTAAGAATGAAGAGCGTTACATTCGAATGTGAACCTTTGTCCC
CCGTCCCTTGTCCGCGTAGGCTGCGTTGCGCTGCCTTCCACCATATACAT
ATAACTCCCCCCCCTCCCACCCGGTACAACCATTTAAGTGTCAACAATGA
CAGCAACAACAATAACGACGGCAACCATTGCCAACACTAACATGACCAAC
AACAATGACAGCGATTAGCAACACCATCACCACCACTATCAACAACACCG
CCACCACCAATAACAACAGACAATCAACGACAACACTAACACCCAACACC
ACCAACAACAACACCAACGACAGATCCGGAGCCCGAGCTTGGCGCGCAGG
GGGAGGGAGGGACAGGCGGCGAAGCAGCGGGGGGTGAGGTTGGCGTGCCG
CACTTCTGGATGCAGTGCATGCTTCACCACGAGGCCCTGCACGATGTCGT
TTGGTGA
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10649:403..4459+

>mRNA_E-fasciculatus_F_contig10649.514.1 ID=mRNA_E-fasciculatus_F_contig10649.514.1|Name=mRNA_E-fasciculatus_F_contig10649.514.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1170bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10649:403..4459+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TCTGCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNTGTTAGGACGAT
GGACGCAGGGGAGGTCCCCGTGGCAATGGGCTCTGCTGAAGGTGGAGACG
AAGTCTGCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNTGTTAGGAC
GATGGACGCAGGGGAGGTCCCCGTGGCAATGGGCTCTGCTGAAGGTGGAG
ACGAAGCAGTGACCGGTGCTGCTTTGGCCGACATGCTGTCGGGCATCGGT
ATCAGCGACAACGCCTCAGCAGTGACCGGTGCTGCTTTGGCCGACATGCT
GTCGGGCATCGGTATCAGCGACAACGCCTCAGGGAACGCGGCGGCTGCCC
GGGGTGGCGGGGGGCAGGACGTGGACGAAGACGACGACGATGATGATGAC
GAGGACTATGTAGATGGGGGAACGCGGCGGCTGCCCGGGGTGGCGGGGGG
CAGGACGTGGACGAAGACGACGACGATGATGATGACGAGGACTATGTAGA
TGGGGAGGAGAACGAGGTAGAGCTACCGCCAGAAGTGATGAAGAGGCTGT
ACGAGCTTAAGGCCCTCCAGTCAGAGAAGGACGTGGAGGAGAACGAGGTA
GAGCTACCGCCAGAAGTGATGAAGAGGCTGTACGAGCTTAAGGCCCTCCA
GTCAGAGAAGGACGTGATTTACGAAAAGTACAAGGCGAAGCGCGCTGAGT
TGGAGCTGGAATTTGCCAAGGAGTACGGGGCGATCTACAGCCGCCGGGCG
GAGGTGGTGGCGGGAAAGTCGAGGGATATAGACGATTTACGAAAAGTACA
AGGCGAAGCGCGCTGAGTTGGAGCTGGAATTTGCCAAGGAGTACGGGGCG
ATCTACAGCCGCCGGGCGGAGGTGGTGGCGGGAAAGTCGAGGGATATAGA
CGATCCGGAGCCCGAGCTTGGCGCGCAGGGGGAGGGAGGGACAGGCGGCG
AAGCAGCGGGGGGTGAGGTTGGCGTGCCGCACTTCTGGATGCAGTGCATG
CTTCACCACGAGGCCCTGCACGATGTCGTTTGGTGAATCCGGAGCCCGAG
CTTGGCGCGCAGGGGGAGGGAGGGACAGGCGGCGAAGCAGCGGGGGGTGA
GGTTGGCGTGCCGCACTTCTGGATGCAGTGCATGCTTCACCACGAGGCCC
TGCACGATGTCGTTTGGTGA
back to top