prot_E_fasciculatus_S2_contig9896.17890.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig9896.17890.1
Unique Name	prot_E_fasciculatus_S2_contig9896.17890.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	500

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig9896.17890.1 vs. uniprot
Match: D8LFI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI6_ECTSI)

HSP 1 Score: 853 bits (2203), Expect = 1.440e-280
Identity = 469/494 (94.94%), Postives = 479/494 (96.96%), Query Frame = 0

Query:    7 QVETVVNFVVRVALFAMANLKDSGITHLSRRCLGLLEKALELWPDTPIKYTYFEKLVHVMVDIDPQTASQPQLQATMKALPGVLEASLDILIISLGTEESTAATNTSGDATASPATADTXXTATKTPARAPNNFVLQNVAKFQRLLGPSLRADTPGIRQRLLRLIRRLAALYGPGKSPKEFQEAKFWDNFQGSVERRLKAALGEKPPPPATHPAAWYGSAAASVXXXXXXXXXXXNGGAGVAGEYNRSKALSSVKIVESVSAAYPAFADFHAASLMDLVRMLSRQHFLQAGVAASTLAARYGGNAAAVALPPGLVGSDPMSPSSRLLPTASMAVLNTAVTVELVMDDAPLTEHVKALVISLKLLRGITDRAQIPDNKKVFQSLSAACLSILDKSDNVALLTTVMGFVKDWLLKGPAQSNSPSLTDQERRMFVQRLVRLDRLSEVHVQSVFKLQLEVIDALVNVPEGRAMPKWVQAEAPRLFMAGLMAADPALRR 500
            +VETVVNFVVRVALFAMANLKDSGI HLSRRCLGLLEKALELWPDTPIKYTYFEKLVHVMVDIDPQTASQPQLQATMKALPGVLEASLDILIISLGTEESTAATNTSGDATASPATADT  +ATKTPAR PNNFVLQNVAKFQRLLGPSLRADTPGIRQRLLRLIRRLAALYGPG++P+EFQEAKFWDNFQGSVERRLKAALGEKPPPPATHP AWYGSAAASV XXXXXXXXXXNGGAGVAGEYNRSKALSSVKIVESVSAAYPAFADFHAASLMDLVRMLSRQHFLQAGV ASTLAARYGGNAAAVALPPGLVGSDPMSPSSRLLPTASMAVLNTAVTVE V+DDAPLTEHV+ALVI LKLLRGITDRAQIPDNKKVFQSLSAACLSILDKSDNVALLTTVMGFVKDWLLK P+Q  SP L+DQER+MFVQRLVRLDRLSEVHVQSVFKLQLEVIDALVNVPEG  MPKWVQAEAPRLFMAGLMAADPALRR
Sbjct: 2567 KVETVVNFVVRVALFAMANLKDSGIAHLSRRCLGLLEKALELWPDTPIKYTYFEKLVHVMVDIDPQTASQPQLQATMKALPGVLEASLDILIISLGTEESTAATNTSGDATASPATADTT-SATKTPARVPNNFVLQNVAKFQRLLGPSLRADTPGIRQRLLRLIRRLAALYGPGEAPREFQEAKFWDNFQGSVERRLKAALGEKPPPPATHPTAWYGSAAASVSXXXXXXXXXXNGGAGVAGEYNRSKALSSVKIVESVSAAYPAFADFHAASLMDLVRMLSRQHFLQAGVVASTLAARYGGNAAAVALPPGLVGSDPMSPSSRLLPTASMAVLNTAVTVEFVVDDAPLTEHVEALVICLKLLRGITDRAQIPDNKKVFQSLSAACLSILDKSDNVALLTTVMGFVKDWLLKEPSQPKSPFLSDQERKMFVQRLVRLDRLSEVHVQSVFKLQLEVIDALVNVPEGSTMPKWVQAEAPRLFMAGLMAADPALRR 3059

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BLAST of mRNA_E_fasciculatus_S2_contig9896.17890.1 vs. uniprot
Match: A0A6H5KAF7_9PHAE (FAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAF7_9PHAE)

HSP 1 Score: 818 bits (2112), Expect = 6.800e-269
Identity = 459/494 (92.91%), Postives = 469/494 (94.94%), Query Frame = 0

Query:    8 VETVVNFVVRVALFAMANLKDSGITHLSRRCLGLLEKALELWPDTPIKYTYFEKLVHVMVDIDPQTASQPQLQATMKALPGVLEASLDILIISLGTEESTAATNTSGDATASPATADTXXTATKTPARAPNNFVLQNVAKFQRLLGPSLRADTPGIRQRLLRLIRRLAALYGPGKSPKEFQEAKFWDNFQGSVERRLKAALGEKPPPPATHPAAWYGSAAASVXXXXXXXXXXXN-GGAGVAGEYNRSKALSSVKIVESVSAAYPAFADFHAASLMDLVRMLSRQHFLQAGVAASTLAARYGGNAAAVALPPGLVGSDPMSPSSRLLPTASMAVLNTAVTVELVMDDAPLTEHVKALVISLKLLRGITDRAQIPDNKKVFQSLSAACLSILDKSDNVALLTTVMGFVKDWLLKGPAQSNSPSLTDQERRMFVQRLVRLDRLSEVHVQSVFKLQLEVIDALVNVPEGRAMPKWVQAEAPRLFMAGLMAADPALRR 500
            VETVVNFVVRVALFAMANLKDSGITHLSRRCLGLLEKALELWPDTPIKY  FEKLVHVMVDIDPQTASQ QLQATMKALPGVLEASLDILIISLG EESTAATN SGDATAS ATA T  TA KTPAR PNN VLQ+VAKFQRLLGPSLRADTPGIRQRLLRLIRRLAALYGPGK+PKEFQEAKFWDNFQGSVERRLKAALGEKPPPPA HP AWYGSAAASVXXXXXXXXXXX  GGAGVAGEYNRSKALSSVKIVESVSAAYPAFADFHAASLMDLVRMLSRQHFLQAGV ASTLAARYGGNAAAVALPPGLVGSDPMSPSSRLLPTASMAVLNTAVTVE V+DDAPLTEHV+ALVI LKLLRGITDRAQIPDN+KVFQSL+AACLSILDKSDNVALLTTVMGFVKDWLLK P+Q NSPSL+DQER+MFVQRLVRLDRLSEVHVQ VFKLQLEVIDALVNVPEG  MPKWVQAEAPRLFMAGL+AADP LRR
Sbjct: 1590 VETVVNFVVRVALFAMANLKDSGITHLSRRCLGLLEKALELWPDTPIKY--FEKLVHVMVDIDPQTASQSQLQATMKALPGVLEASLDILIISLGAEESTAATNISGDATASLATASTTSTA-KTPARVPNNLVLQHVAKFQRLLGPSLRADTPGIRQRLLRLIRRLAALYGPGKAPKEFQEAKFWDNFQGSVERRLKAALGEKPPPPANHPTAWYGSAAASVXXXXXXXXXXXXXGGAGVAGEYNRSKALSSVKIVESVSAAYPAFADFHAASLMDLVRMLSRQHFLQAGVVASTLAARYGGNAAAVALPPGLVGSDPMSPSSRLLPTASMAVLNTAVTVEFVVDDAPLTEHVEALVICLKLLRGITDRAQIPDNRKVFQSLAAACLSILDKSDNVALLTTVMGFVKDWLLKEPSQPNSPSLSDQERKMFVQRLVRLDRLSEVHVQPVFKLQLEVIDALVNVPEGSTMPKWVQAEAPRLFMAGLLAADPVLRR 2080

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig9896.17890.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig9896.17890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LFI6_ECTSI	1.440e-280	94.94	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KAF7_9PHAE	6.800e-269	92.91	FAT domain-containing protein n=1 Tax=Ectocarpus s...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11139	ATAXIA TELANGIECTASIA MUTATED ATM -RELATED	coord: 8..499
IPR033317	Transcription-associated protein 1	PANTHER	PTHR11139:SF1	TRANSFORMATION/TRANSCRIPTION DOMAIN-ASSOCIATED PROTEIN	coord: 8..499

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig9896	contig	E_fasciculatus_S2_contig9896:487..5349 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig9896.17890.1	mRNA_E_fasciculatus_S2_contig9896.17890.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig9896 487..5349 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig9896.17890.1 ID=prot_E_fasciculatus_S2_contig9896.17890.1|Name=mRNA_E_fasciculatus_S2_contig9896.17890.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=500bp
MLFCSLQVETVVNFVVRVALFAMANLKDSGITHLSRRCLGLLEKALELWP
DTPIKYTYFEKLVHVMVDIDPQTASQPQLQATMKALPGVLEASLDILIIS
LGTEESTAATNTSGDATASPATADTTSTATKTPARAPNNFVLQNVAKFQR
LLGPSLRADTPGIRQRLLRLIRRLAALYGPGKSPKEFQEAKFWDNFQGSV
ERRLKAALGEKPPPPATHPAAWYGSAAASVSATASVAAAAANGGAGVAGE
YNRSKALSSVKIVESVSAAYPAFADFHAASLMDLVRMLSRQHFLQAGVAA
STLAARYGGNAAAVALPPGLVGSDPMSPSSRLLPTASMAVLNTAVTVELV
MDDAPLTEHVKALVISLKLLRGITDRAQIPDNKKVFQSLSAACLSILDKS
DNVALLTTVMGFVKDWLLKGPAQSNSPSLTDQERRMFVQRLVRLDRLSEV
HVQSVFKLQLEVIDALVNVPEGRAMPKWVQAEAPRLFMAGLMAADPALRR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR033317	TRA1/TRRAP