prot_E_fasciculatus_S2_contig98.17800.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig98.17800.1
Unique Name	prot_E_fasciculatus_S2_contig98.17800.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	288

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig98.17800.1 vs. uniprot
Match: A0A6H5L9N5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9N5_9PHAE)

HSP 1 Score: 493 bits (1268), Expect = 1.220e-174
Identity = 272/295 (92.20%), Postives = 281/295 (95.25%), Query Frame = 0

Query:    1 MASTSGEAEEY--DSSDVTGSEEDL-SPNSKKGNXXXXXXXK-----ALDRSQAIVKWAGGEAASTGVSAAMVAAGITTLVAPTVAVIVLVGHVIVRGSIRAVKKKLKVRAEQKAHLEQLNLTESTARSSSGHFTVVLNGVGPNGEFNSFVSPNDDASYGAVSPGHLKGVSKLISGATNCNVRDMGGFTEGAAVPFGVRISMPDVLALMRQSWVYDRFCQTKCGTMTVVVLRSQHSRGKDKLRVAWENSGSLDYTKAQVYTEREWKKTKFAGKTKTMPEGIADVDMALDKTLVFD 287
            MASTSGEAEEY  +SSD+TGS+EDL S NSKKG  XXXXXX      A+DRSQAIVKWAGGEAASTGVSAAMVAAGITTLVAPTVAVIVLVGHVIVRGSIRAVKKKLKVRAEQKAHLEQLNLTE+TARSSSGHFTVVLNGVGPNGEFNS+VSPNDDASY AVSPGHLKG+SKLISGATNCNVRDMGG+TEGAAVPF VRISMPDVLALMRQSWVY+RFCQTKCGTMTVVVLRSQHSRGKDKLRVAWENSGSLDYTKAQVYTEREWKKTKFAGKTKTMPEGIADVDMALDKTLVFD
Sbjct:    1 MASTSGEAEEYAYESSDITGSDEDLPSSNSKKGKDXXXXXXXXXXXXAVDRSQAIVKWAGGEAASTGVSAAMVAAGITTLVAPTVAVIVLVGHVIVRGSIRAVKKKLKVRAEQKAHLEQLNLTETTARSSSGHFTVVLNGVGPNGEFNSYVSPNDDASYRAVSPGHLKGISKLISGATNCNVRDMGGYTEGAAVPFCVRISMPDVLALMRQSWVYERFCQTKCGTMTVVVLRSQHSRGKDKLRVAWENSGSLDYTKAQVYTEREWKKTKFAGKTKTMPEGIADVDMALDKTLVFD 295

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig98.17800.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig98.17800.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5L9N5_9PHAE	1.220e-174	92.20	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 89..287
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..61
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 62..88
None	No IPR available	TMHMM	TMhelix		coord: 66..88

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig98	contig	E_fasciculatus_S2_contig98:5250..9825 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig98.17800.1	mRNA_E_fasciculatus_S2_contig98.17800.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig98 5250..9825 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig98.17800.1 ID=prot_E_fasciculatus_S2_contig98.17800.1|Name=mRNA_E_fasciculatus_S2_contig98.17800.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=288bp
MASTSGEAEEYDSSDVTGSEEDLSPNSKKGNDKKGSKKKALDRSQAIVKW
AGGEAASTGVSAAMVAAGITTLVAPTVAVIVLVGHVIVRGSIRAVKKKLK
VRAEQKAHLEQLNLTESTARSSSGHFTVVLNGVGPNGEFNSFVSPNDDAS
YGAVSPGHLKGVSKLISGATNCNVRDMGGFTEGAAVPFGVRISMPDVLAL
MRQSWVYDRFCQTKCGTMTVVVLRSQHSRGKDKLRVAWENSGSLDYTKAQ
VYTEREWKKTKFAGKTKTMPEGIADVDMALDKTLVFD*