prot_E_fasciculatus_S2_contig9766.17760.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9766.17760.1
Unique Nameprot_E_fasciculatus_S2_contig9766.17760.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length115
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9766.17760.1 vs. uniprot
Match: A0A6H5JFX0_9PHAE (DRIM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFX0_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 1.180e-61
Identity = 110/115 (95.65%), Postives = 113/115 (98.26%), Query Frame = 0
Query:    1 LQLLSVLARDLQSSFFPHFPRVSTALTGLIASPDVAPEICGRVLQCLGFLLKFVARPLSKDMAAVRALYAPLLGHKRDFARKMAAQTLAPAVRRLKPKAMRRHAKQLVGALATGS 115
            LQLLSVLARDLQSSFFPHFPRVSTAL GLIASPDV+PEICGRVL+CLGFLLKFVARPLSKDMAAVRALY+PLLGHKRDFARKMAAQTLAPAVRRLKPKAMRRHAKQLVGALA GS
Sbjct:  125 LQLLSVLARDLQSSFFPHFPRVSTALIGLIASPDVSPEICGRVLRCLGFLLKFVARPLSKDMAAVRALYSPLLGHKRDFARKMAAQTLAPAVRRLKPKAMRRHAKQLVGALAAGS 239          
BLAST of mRNA_E_fasciculatus_S2_contig9766.17760.1 vs. uniprot
Match: D8LFJ6_ECTSI (DRIM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFJ6_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 1.180e-61
Identity = 110/115 (95.65%), Postives = 113/115 (98.26%), Query Frame = 0
Query:    1 LQLLSVLARDLQSSFFPHFPRVSTALTGLIASPDVAPEICGRVLQCLGFLLKFVARPLSKDMAAVRALYAPLLGHKRDFARKMAAQTLAPAVRRLKPKAMRRHAKQLVGALATGS 115
            LQLLSVLARDLQSSFFPHFPRVSTAL GLIASPDV+PEICGRVL+CLGFLLKFVARPLSKDMAAVRALYAPLLGHKRDFARKMAAQTLAPAVRRLKPKAMRRHAKQLVGALA G+
Sbjct:  125 LQLLSVLARDLQSSFFPHFPRVSTALIGLIASPDVSPEICGRVLRCLGFLLKFVARPLSKDMAAVRALYAPLLGHKRDFARKMAAQTLAPAVRRLKPKAMRRHAKQLVGALAAGN 239          
BLAST of mRNA_E_fasciculatus_S2_contig9766.17760.1 vs. uniprot
Match: A0A835YZH5_9STRA (DRIM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZH5_9STRA)

HSP 1 Score: 117 bits (294), Expect = 2.300e-28
Identity = 63/113 (55.75%), Postives = 80/113 (70.80%), Query Frame = 0
Query:    1 LQLLSVLARDLQSSFFPHFPRVSTALTGLIASP-DVAPEICGRVLQCLGFLLKFVARPLSKDMAAVRALYAPLLGHKRDFARKMAAQTLAPAVRRLKPKAMRRHAKQLVGALA 112
            LQLLSVLARDLQS+F PHF      L  L+  P    PE  GRV++ +G++LKF  RPL +D AA+RA YAPLLGH+RD+ R+ A +T A  +R+LKPKA R HA+ L+ ALA
Sbjct:  124 LQLLSVLARDLQSAFHPHFAPSMDVLAALLQGPAGDEPEAAGRVMRAVGYILKFDIRPLLEDPAALRAYYAPLLGHRRDYVRRYAGETFAAVLRKLKPKAARAHARALLRALA 236          
BLAST of mRNA_E_fasciculatus_S2_contig9766.17760.1 vs. uniprot
Match: A0A835YJ13_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ13_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 4.950e-21
Identity = 48/85 (56.47%), Postives = 59/85 (69.41%), Query Frame = 0
Query:    1 LQLLSVLARDLQSSFFPHFPRVSTALTGLIASP-DVAPEICGRVLQCLGFLLKFVARPLSKDMAAVRALYAPLLGHKRDFARKMA 84
            LQLLSVLARDLQS+F PHF      L  L+  P    PE  GRV++ +G++LKF  RPL  D AA+RA YAPLLGH+RD+ R+ A
Sbjct:  124 LQLLSVLARDLQSAFHPHFAPSKDVLAALLQGPAGDEPEAAGRVMRAVGYILKFNTRPLLADPAALRAYYAPLLGHRRDYVRRYA 208          
BLAST of mRNA_E_fasciculatus_S2_contig9766.17760.1 vs. uniprot
Match: A0A2R5GNP6_9STRA (Small subunit processome component 20-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNP6_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 5.540e-13
Identity = 42/114 (36.84%), Postives = 63/114 (55.26%), Query Frame = 0
Query:    1 LQLLSVLARDLQSSFFPHFPRVSTALTGLIASPDVAPEICGRVLQCLGFLLKFVARPLSKDMAAVRALYAPLLGHKRDFARKMAAQTLAPAVRRLKPKAMRRHAKQLVGALATG 114
            L+L+ V+A+D++    PH  R+  A+ G I   D+  ++C    + LG LL      L  D+ ++R   A LLGH+RDF RK AA   AP +RRL PK +    K+++   A G
Sbjct:  104 LKLVPVIAKDVREELLPHIDRLLDAVVGQIVEDDL--DLCAEAFRALGGLLT----ELDLDLDSLRDYMAQLLGHRRDFVRKFAADAFAPVLRRLPPKQLANQVKRVICRFAAG 211          
BLAST of mRNA_E_fasciculatus_S2_contig9766.17760.1 vs. uniprot
Match: A0A8J7P0X1_ATRSP (UTP20 protein (Fragment) n=1 Tax=Atractosteus spatula TaxID=7917 RepID=A0A8J7P0X1_ATRSP)

HSP 1 Score: 67.0 bits (162), Expect = 1.490e-10
Identity = 35/95 (36.84%), Postives = 57/95 (60.00%), Query Frame = 0
Query:    1 LQLLSVLARDLQSSFFPHFPRVSTALTGLIASPDVAPEICGRVLQCLGFLLKFVARPLSKDMAAVRALYAPLLGHKRDFARKMAAQTLAPAVRRL 95
            L L+ +LARDLQ+ F+PHF      +T L+ + D   ++      CL +L K++ R + KDMA +  LY+ LL HK++  R  AA++ A  +R++
Sbjct:  125 LDLVVLLARDLQTDFYPHFRDFFIIITSLLETQDT--QLLEWAFTCLSYLYKYLWRLMVKDMAEIYRLYSTLLAHKKEHIRNFAAESFAFLMRKV 217          
BLAST of mRNA_E_fasciculatus_S2_contig9766.17760.1 vs. uniprot
Match: W5NDJ6_LEPOC (UTP20 small subunit processome component n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5NDJ6_LEPOC)

HSP 1 Score: 66.6 bits (161), Expect = 2.030e-10
Identity = 35/95 (36.84%), Postives = 57/95 (60.00%), Query Frame = 0
Query:    1 LQLLSVLARDLQSSFFPHFPRVSTALTGLIASPDVAPEICGRVLQCLGFLLKFVARPLSKDMAAVRALYAPLLGHKRDFARKMAAQTLAPAVRRL 95
            L L+ +LARDLQ+ F+PHF      +T L+ + D   ++      CL +L K++ R + KDMA +  LY+ LL HK++  R  AA++ A  +R++
Sbjct:  108 LDLVVLLARDLQTDFYPHFRDFFIIVTSLLETQDT--QLLEWAFTCLSYLYKYLWRLMVKDMAEIYRLYSTLLAHKKEHIRNFAAESFAFLMRKV 200          
BLAST of mRNA_E_fasciculatus_S2_contig9766.17760.1 vs. uniprot
Match: A0A444UDZ3_ACIRT (Small subunit processome component 20-like n=3 Tax=Acipenseroidei TaxID=186622 RepID=A0A444UDZ3_ACIRT)

HSP 1 Score: 65.9 bits (159), Expect = 3.790e-10
Identity = 35/95 (36.84%), Postives = 57/95 (60.00%), Query Frame = 0
Query:    1 LQLLSVLARDLQSSFFPHFPRVSTALTGLIASPDVAPEICGRVLQCLGFLLKFVARPLSKDMAAVRALYAPLLGHKRDFARKMAAQTLAPAVRRL 95
            L L+ +LARDLQ+ F+PHF      +T L+ + D   E    V  CL +L K++ R + KD++ + +LY+ LL H R+  R  AA++ A  +R++
Sbjct:  108 LDLVVLLARDLQTDFYPHFREFFVIITSLLETQDT--EQLEWVFTCLSYLYKYLWRLMVKDISEIYSLYSTLLAHTREHIRNFAAESFAFLMRKV 200          
BLAST of mRNA_E_fasciculatus_S2_contig9766.17760.1 vs. uniprot
Match: A0A3Q3Q499_MONAL (UTP20 small subunit processome component n=1 Tax=Monopterus albus TaxID=43700 RepID=A0A3Q3Q499_MONAL)

HSP 1 Score: 64.3 bits (155), Expect = 1.310e-9
Identity = 33/90 (36.67%), Postives = 55/90 (61.11%), Query Frame = 0
Query:    6 VLARDLQSSFFPHFPRVSTALTGLIASPDVAPEICGRVLQCLGFLLKFVARPLSKDMAAVRALYAPLLGHKRDFARKMAAQTLAPAVRRL 95
            VLA DLQ+ F+PHFP     +T L+ + D   E+      CL +L K++ R + KD+  + +LY+ LL HK++  RK AA++ +  +R++
Sbjct:  114 VLAIDLQTDFYPHFPDFFILITSLLDTKDT--EVLELAFICLSYLYKYLWRLMVKDIINIYSLYSTLLAHKKEHIRKFAAESFSFLMRKV 201          
BLAST of mRNA_E_fasciculatus_S2_contig9766.17760.1 vs. uniprot
Match: A0A2K5J1T7_COLAP (UTP20 small subunit processome component n=1 Tax=Colobus angolensis palliatus TaxID=336983 RepID=A0A2K5J1T7_COLAP)

HSP 1 Score: 62.0 bits (149), Expect = 8.460e-9
Identity = 33/98 (33.67%), Postives = 55/98 (56.12%), Query Frame = 0
Query:    1 LQLLSVLARDLQSSFFPHFPRVSTALTGLIASPDVAPEICGRVLQCLGFLLKFVARPLSKDMAAVRALYAPLLGHKRDFARKMAAQTLAPAVRRLKPK 98
            L L+ +LARDLQ  F+PHFP     +T ++ + D   E+       L +L K++ R + KDM  + ++Y+ LL HK+   R  AA++    +R++  K
Sbjct:  108 LDLVVLLARDLQMDFYPHFPEFFLTITSILETQDT--ELLEWAFTSLSYLYKYLWRLMVKDMPNIYSMYSTLLAHKKLHIRNFAAESFTFLMRKVSDK 203          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9766.17760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5JFX0_9PHAE1.180e-6195.65DRIM domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LFJ6_ECTSI1.180e-6195.65DRIM domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YZH5_9STRA2.300e-2855.75DRIM domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835YJ13_9STRA4.950e-2156.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2R5GNP6_9STRA5.540e-1336.84Small subunit processome component 20-like n=1 Tax... [more]
A0A8J7P0X1_ATRSP1.490e-1036.84UTP20 protein (Fragment) n=1 Tax=Atractosteus spat... [more]
W5NDJ6_LEPOC2.030e-1036.84UTP20 small subunit processome component n=2 Tax=L... [more]
A0A444UDZ3_ACIRT3.790e-1036.84Small subunit processome component 20-like n=3 Tax... [more]
A0A3Q3Q499_MONAL1.310e-936.67UTP20 small subunit processome component n=1 Tax=M... [more]
A0A2K5J1T7_COLAP8.460e-933.67UTP20 small subunit processome component n=1 Tax=C... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..115
e-value: 7.4E-6
score: 27.6
NoneNo IPR availablePANTHERPTHR17695UNCHARACTERIZEDcoord: 1..101
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9766contigE_fasciculatus_S2_contig9766:648..992 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9766.17760.1mRNA_E_fasciculatus_S2_contig9766.17760.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9766 648..992 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9766.17760.1 ID=prot_E_fasciculatus_S2_contig9766.17760.1|Name=mRNA_E_fasciculatus_S2_contig9766.17760.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=115bp
LQLLSVLARDLQSSFFPHFPRVSTALTGLIASPDVAPEICGRVLQCLGFL
LKFVARPLSKDMAAVRALYAPLLGHKRDFARKMAAQTLAPAVRRLKPKAM
RRHAKQLVGALATGS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR011989ARM-like