prot_E_fasciculatus_S2_contig9745.17743.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig9745.17743.1
Unique Name	prot_E_fasciculatus_S2_contig9745.17743.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	47

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig9745.17743.1 vs. uniprot
Match: D7FVR3_ECTSI (Dynein light chain n=2 Tax=Stramenopiles TaxID=33634 RepID=D7FVR3_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 1.380e-25
Identity = 44/47 (93.62%), Postives = 46/47 (97.87%), Query Frame = 0

Query:    1 QDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 47
            +DIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:   36 KDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQVA 82

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BLAST of mRNA_E_fasciculatus_S2_contig9745.17743.1 vs. uniprot
Match: A0A2G8KQE3_STIJA (Dynein light chain n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KQE3_STIJA)

HSP 1 Score: 95.9 bits (237), Expect = 7.970e-25
Identity = 43/47 (91.49%), Postives = 45/47 (95.74%), Query Frame = 0

Query:    1 QDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 47
            +DIAAFIKKEFDKKYS TWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:   36 KDIAAFIKKEFDKKYSPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA 82

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BLAST of mRNA_E_fasciculatus_S2_contig9745.17743.1 vs. uniprot
Match: UPI0002657BB7 (dynein light chain 2, cytoplasmic n=2 Tax=Protostomia TaxID=33317 RepID=UPI0002657BB7)

HSP 1 Score: 95.9 bits (237), Expect = 7.970e-25
Identity = 43/47 (91.49%), Postives = 45/47 (95.74%), Query Frame = 0

Query:    1 QDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 47
            +DIAAFIKKEFDKKYS TWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:   36 KDIAAFIKKEFDKKYSPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA 82

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BLAST of mRNA_E_fasciculatus_S2_contig9745.17743.1 vs. uniprot
Match: A0A1W0WKT2_HYPDU (Dynein light chain n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0WKT2_HYPDU)

HSP 1 Score: 94.7 bits (234), Expect = 1.640e-24
Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 0

Query:    1 QDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 47
            +DIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:   24 KDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA 70

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BLAST of mRNA_E_fasciculatus_S2_contig9745.17743.1 vs. uniprot
Match: A0A667XYR1_9TELE (Dynein light chain n=2 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667XYR1_9TELE)

HSP 1 Score: 94.7 bits (234), Expect = 2.160e-24
Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 0

Query:    1 QDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 47
            +DIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:   34 KDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA 80

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BLAST of mRNA_E_fasciculatus_S2_contig9745.17743.1 vs. uniprot
Match: W4HCB9_9STRA (Dynein light chain n=26 Tax=Oomycota TaxID=4762 RepID=W4HCB9_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.290e-24
Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 0

Query:    1 QDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 47
            +DIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:   36 KDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA 82

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BLAST of mRNA_E_fasciculatus_S2_contig9745.17743.1 vs. uniprot
Match: H2S8S8_TAKRU (Dynein light chain n=7 Tax=Clupeocephala TaxID=186625 RepID=H2S8S8_TAKRU)

HSP 1 Score: 94.7 bits (234), Expect = 2.290e-24
Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 0

Query:    1 QDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 47
            +DIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:   36 KDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA 82

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BLAST of mRNA_E_fasciculatus_S2_contig9745.17743.1 vs. uniprot
Match: C1ML17_MICPC (Dynein light chain n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1ML17_MICPC)

HSP 1 Score: 94.7 bits (234), Expect = 2.290e-24
Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 0

Query:    1 QDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 47
            +DIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:   36 KDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA 82

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BLAST of mRNA_E_fasciculatus_S2_contig9745.17743.1 vs. uniprot
Match: C3XVM4_BRAFL (Dynein light chain n=4 Tax=Branchiostoma TaxID=7737 RepID=C3XVM4_BRAFL)

HSP 1 Score: 94.7 bits (234), Expect = 2.290e-24
Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 0

Query:    1 QDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 47
            +DIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:   36 KDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA 82

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BLAST of mRNA_E_fasciculatus_S2_contig9745.17743.1 vs. uniprot
Match: A0A2C9K100_BIOGL (Dynein light chain n=4 Tax=Euthyneura TaxID=216307 RepID=A0A2C9K100_BIOGL)

HSP 1 Score: 94.7 bits (234), Expect = 2.290e-24
Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 0

Query:    1 QDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 47
            +DIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:   36 KDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA 82

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig9745.17743.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig9745.17743.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FVR3_ECTSI	1.380e-25	93.62	Dynein light chain n=2 Tax=Stramenopiles TaxID=336...	[more]
A0A2G8KQE3_STIJA	7.970e-25	91.49	Dynein light chain n=1 Tax=Stichopus japonicus Tax...	[more]
UPI0002657BB7	7.970e-25	91.49	dynein light chain 2, cytoplasmic n=2 Tax=Protosto...	[more]
A0A1W0WKT2_HYPDU	1.640e-24	89.36	Dynein light chain n=1 Tax=Hypsibius dujardini Tax...	[more]
A0A667XYR1_9TELE	2.160e-24	89.36	Dynein light chain n=2 Tax=Myripristis murdjan Tax...	[more]
W4HCB9_9STRA	2.290e-24	89.36	Dynein light chain n=26 Tax=Oomycota TaxID=4762 Re...	[more]
H2S8S8_TAKRU	2.290e-24	89.36	Dynein light chain n=7 Tax=Clupeocephala TaxID=186...	[more]
C1ML17_MICPC	2.290e-24	89.36	Dynein light chain n=2 Tax=Micromonas pusilla TaxI...	[more]
C3XVM4_BRAFL	2.290e-24	89.36	Dynein light chain n=4 Tax=Branchiostoma TaxID=773...	[more]
A0A2C9K100_BIOGL	2.290e-24	89.36	Dynein light chain n=4 Tax=Euthyneura TaxID=216307...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 1..46 e-value: 1.1E-6 score: 38.2
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 1..45 e-value: 3.4E-24 score: 85.0
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 1..46
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10		coord: 1..47 e-value: 8.5E-25 score: 88.5
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 1..46
None	No IPR available	PANTHER	PTHR11886:SF62	DYNEIN LIGHT CHAIN	coord: 1..46
IPR019763	Dynein light chain, type 1/2, conserved site	PROSITE	PS01239	DYNEIN_LIGHT_1	coord: 20..34

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig9745	contig	E_fasciculatus_S2_contig9745:143..283 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig9745.17743.1	mRNA_E_fasciculatus_S2_contig9745.17743.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig9745 143..283 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig9745.17743.1 ID=prot_E_fasciculatus_S2_contig9745.17743.1|Name=mRNA_E_fasciculatus_S2_contig9745.17743.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=47bp
QDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019763	Dynein_light_1/2_CS
IPR037177	DLC_sf
IPR001372	Dynein_light_chain_typ-1/2