prot_E_fasciculatus_S2_contig974.17737.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig974.17737.1
Unique Nameprot_E_fasciculatus_S2_contig974.17737.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length385
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig974.17737.1 vs. uniprot
Match: D8LD77_ECTSI (CCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD77_ECTSI)

HSP 1 Score: 273 bits (697), Expect = 5.140e-84
Identity = 283/376 (75.27%), Postives = 291/376 (77.39%), Query Frame = 0 
Query:    1 MVEVMDRGREVEWSPDMELEGDDAEKAAALLLAVAPRNRSFDATQNHEGSGPAGTTGVVGAGAGGSSSGPVNAPPAPHPGGGGVPRVDTNSGAVPSEGAGAGAAGXXXXXGSGESSLKREFVGGMMNGAPPNASPRGSAAAAPTGGDSRVAVAASTASSPPSLXXXXXXXXXXXXX----GGGATMRLQSLADLATKELQHMYEVDEADT-GTHNRXXXXXXXXXXXXXXXXX---------SGFSPKRHLSPRLSGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSHHHHLRERGVPRSRHERAEXXXXXXXXXXXXXXXXXXRGRRHRPRSVSMPEGMELQARAWSGGYSSGRRKGGRIDSIKEELEVTL 362
            MVE+MD  REVEWSPDMELEGDDAEKAAALLLAVAPRNRSFDATQN EG GPAGTTG                          V  V T  G VPSEGAG     XXXXX SGES+LKREF GGM+NGA PN S R SAAAA +GGD R A   STASSP   XXXXXXXXXXXXX    GGGA+MRLQSLADLAT+ELQ M +VDE DT G H  XXXXXXXXXXXXXXXXX         +GFSPKRHLSPRLSGG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      LRERGVPRSRHERAEXXXXXXXXXXXXXXXXXXRGRRHRPRSVSMPEGMELQARAWSGGYSSGRRK GRIDSIKEELEV L
Sbjct:    1 MVEIMDSRREVEWSPDMELEGDDAEKAAALLLAVAPRNRSFDATQNPEGPGPAGTTGXXXXXXXXXXXXXXXXXXXXXXXXX-VAHVGTEGGTVPSEGAGXXXXXXXXXXXSGESALKREF-GGMLNGALPNTSYRDSAAAALSGGDPRAATV-STASSPSXXXXXXXXXXXXXXXXXXIGGGASMRLQSLADLATQELQTMCDVDETDTAGAHGXXXXXXXXXXXXXXXXXXXXXRTPPAPAGFSPKRHLSPRLSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LRERGVPRSRHERAEXXXXXXXXXXXXXXXXXXRGRRHRPRSVSMPEGMELQARAWSGGYSSGRRKSGRIDSIKEELEVCL 371
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig974.17737.1 vs. uniprot
Match: A0A6H5K330_9PHAE (CCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K330_9PHAE)

HSP 1 Score: 261 bits (668), Expect = 1.410e-77
Identity = 229/380 (60.26%), Postives = 235/380 (61.84%), Query Frame = 0 
Query:    1 MVEVMDRGREVEWSPDMELEGDDAEKAAALLLAVAPRNRSFDATQNHEGSGPAGTTGVVGAGAGGSSSGPVNAPPAPHPGGGGVPRVDTNSGAVPSEGAGAGAAGXXXXXGSGESSLKREFVGGMMNGAPPNASPRGSAAAAPTGGDSRVAVAASTASSPPSLXXXXXXXXXXXXXGGGATMRLQSLADLATKELQHMYEVDEADT-GTHNRXXXXXXXXXXXXXXXXXS---------GFSPKRHLSPRLSGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------PSHHHHLRERGVPRSRHERAEXXXXXXXXXXXXXXXXXXRGRRHRPRSVSMPEGMELQARAWSGGYSSGRRKGGRIDSIKEELE 359
            MVE+MDRGREVEWSPDMELEGDDAEKAAALLLAVAPRNRSFDATQ  EG GPAGTTG                                  GAVP EGA      XXXXX SGES+LKREF GG +NGA PNAS R SAAAA  GGD R A A S ASSP S              GG A+MRLQSLADLAT+ELQ M +VDE DT G H                   S         GFSPKRHLSPRLSGG  XXXXXXXXXXXXXXXX        XXXXX           P     LRERGVPRSRHER  XXXXXXXXX         RG RHRPRSVSMPEGMELQARAWSGGYSSGRRK GRIDSIKEELE
Sbjct:    1 MVEIMDRGREVEWSPDMELEGDDAEKAAALLLAVAPRNRSFDATQKPEGPGPAGTTGXXXXXXXXXXX---------------XXXXXXXGGAVPPEGAXXXXXXXXXXXXSGESALKREF-GGTVNGALPNASYRDSAAAALPGGDPREA-AVSIASSPSSFSLSTSPRPRSASSGGVASMRLQSLADLATQELQTMGDVDETDTPGIHGHRRHQQHQRSLSNGNSQSSSARTPPLPAGFSPKRHLSPRLSGGGGXXXXXXXXXXXXXXXXVSALSSAAXXXXXCSAPLPPARAAPXXXXXLRERGVPRSRHERXXXXXXXXXXXHAAARAEGGRGMRHRPRSVSMPEGMELQARAWSGGYSSGRRKSGRIDSIKEELE 363
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig974.17737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD77_ECTSI5.140e-8475.27CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K330_9PHAE1.410e-7760.26CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 292..315
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..359
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 360..383
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 384..385

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig974contigE_fasciculatus_S2_contig974:20027..23534 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig974.17737.1mRNA_E_fasciculatus_S2_contig974.17737.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig974 20027..23534 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig974.17737.1 ID=prot_E_fasciculatus_S2_contig974.17737.1|Name=mRNA_E_fasciculatus_S2_contig974.17737.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=385bp
MVEVMDRGREVEWSPDMELEGDDAEKAAALLLAVAPRNRSFDATQNHEGS
GPAGTTGVVGAGAGGSSSGPVNAPPAPHPGGGGVPRVDTNSGAVPSEGAG
AGAAGGADGAGSGESSLKREFVGGMMNGAPPNASPRGSAAAAPTGGDSRV
AVAASTASSPPSLSLSTSPRPRSASSGGGATMRLQSLADLATKELQHMYE
VDEADTGTHNRRHHHHNRSLSNGTPPPPSGFSPKRHLSPRLSGGSGGGRG
VSALSSAAAAVASCSSPSAPAARAAPSHHHHLRERGVPRSRHERAEEEEE
EEEEMRAAARAASGRGRRHRPRSVSMPEGMELQARAWSGGYSSGRRKGGR
IDSIKEELEVTLALAFCLRLAFAAAAAAAAVVVGP
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