prot_E_fasciculatus_S2_contig9724.17725.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig9724.17725.1
Unique Name	prot_E_fasciculatus_S2_contig9724.17725.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	429

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig9724.17725.1 vs. uniprot
Match: D8LMU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU4_ECTSI)

HSP 1 Score: 393 bits (1009), Expect = 7.930e-123
Identity = 287/355 (80.85%), Postives = 290/355 (81.69%), Query Frame = 0

Query:    1 QYQEAFVHYLIAAEQGNKEGQASLAWLLDRSIAAVPSGTSWPSSLVRRAWDSLVRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----SGVGGVADAVRQMGGDPEAMARRYRRLAAEQGDSEARCDIADHLYRQAKDKGAVAPGTGWLPAWARTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------GGIGAATGG----YGRESEDERLARESDAAQLLSDAVAYYRLAAEGGREEGGLGERSPSQRGLFSLGWMHQHGVGVEADPSLARELYRRSGSAPALLGLWMMGASDLVLEVGAPLAVSAVVVAATM 333
            QYQEAFVHYLIAAEQGNKEGQASLAWLLDRS+AA   GTSWPSSLVRRAWDSLV DGXXXXXXXXXXXXX                        XXXXXXXXXX         SGVGGVADAVRQMGGDPEAMARRYRRLAAEQGDSEARCDIADHLYRQAKD GAVAPGTGWLPAWARTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              GGIGA        YGRESEDERLARESDAAQLLSDAVAYYRLAAEGGR EGGLG  SPSQRGLFSLGWMHQHGVGVEADP+LARELYRRSGSAPALLGLWMMGASDL LE+GAPLAVS VVVAATM
Sbjct:  716 QYQEAFVHYLIAAEQGNKEGQASLAWLLDRSMAAAAPGTSWPSSLVRRAWDSLVGDGXXXXXXXXXXXXXDIGPSGGDERVEDASGWPDEGGSGXXXXXXXXXXMRRGRRRRRSGVGGVADAVRQMGGDPEAMARRYRRLAAEQGDSEARCDIADHLYRQAKDMGAVAPGTGWLPAWARTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKPIGQGGIGATXXXXXXXYGRESEDERLARESDAAQLLSDAVAYYRLAAEGGRGEGGLGGSSPSQRGLFSLGWMHQHGVGVEADPALARELYRRSGSAPALLGLWMMGASDLALEIGAPLAVSVVVVAATM 1070

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BLAST of mRNA_E_fasciculatus_S2_contig9724.17725.1 vs. uniprot
Match: A0A6H5JW92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW92_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 3.800e-71
Identity = 166/186 (89.25%), Postives = 169/186 (90.86%), Query Frame = 0

Query:  161 GAVAPGTGWLPAWARTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----GGIGAATGG----YGRESEDERLARESDAAQLLSDAVAYYRLAAEGGREEGGLGERSPSQRGLFSLGWMHQHGVGVEADPSLARELYRRSGSAPALLGLWMMGASDLVLEVGAPLAVSAVVVAATMLAMR 337
            GAVAPGTGWLPAWART XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      GGIGA TGG    YGRESEDERLARESDAAQLLSDAVAYY+LAAEGG  EGGLG  SPSQRGLFSLGWMHQHGVGVEADP+LARELYRRSGSAPALLGLWMMGASDL LE+GAPLAVSAVVVAATMLAMR
Sbjct:    2 GAVAPGTGWLPAWARTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKPIGKGGIGATTGGSGGGYGRESEDERLARESDAAQLLSDAVAYYKLAAEGGGGEGGLGGSSPSQRGLFSLGWMHQHGVGVEADPALARELYRRSGSAPALLGLWMMGASDLALEIGAPLAVSAVVVAATMLAMR 187

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BLAST of mRNA_E_fasciculatus_S2_contig9724.17725.1 vs. uniprot
Match: A0A6H5KY48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY48_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.230e-21
Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 0

Query:  279 HGVGVEADPSLARELYRRSGSAPALLGLWMMGASDLVLEVGAPLAVSAVVVAATMLAMR 337
            HGVGVEADP+LARELYRRSGS PALLGLWMMGASDL LE+GAP AVSAV VAATMLAMR
Sbjct:    9 HGVGVEADPALARELYRRSGSTPALLGLWMMGASDLALEIGAPRAVSAVRVAATMLAMR 67

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BLAST of mRNA_E_fasciculatus_S2_contig9724.17725.1 vs. uniprot
Match: A0A6H5J774_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J774_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 7.620e-12
Identity = 70/106 (66.04%), Postives = 73/106 (68.87%), Query Frame = 0

Query:   27 LLDRSIAAVPSGTSWPSSLVRRAWDSLVRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SGVGGVADAVRQMGGDPEAMAR 131
            LLDRS+AA P+GTSWPSSLVRRAW+SLV DGXXXXXXXXX                              XXXXXXXXXXXXX SGVGGVADAVRQMGGDPEAMAR
Sbjct:   57 LLDRSMAAAPAGTSWPSSLVRRAWESLVGDGXXXXXXXXXADSGPSGGDERVKDAMASGWPDEERSAGGSXXXXXXXXXXXXXXSGVGGVADAVRQMGGDPEAMAR 162

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig9724.17725.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig9724.17725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D8LMU4_ECTSI	7.930e-123	80.85	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JW92_9PHAE	3.800e-71	89.25	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KY48_9PHAE	1.230e-21	89.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5J774_9PHAE	7.620e-12	66.04	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006597	Sel1-like repeat	SMART	SM00671	sel1	coord: 267..302 e-value: 0.0048 score: 26.1
IPR006597	Sel1-like repeat	PFAM	PF08238	Sel1	coord: 243..254 e-value: 130.0 score: 3.4 coord: 271..297 e-value: 0.0011 score: 19.6 coord: 2..17 e-value: 41.0 score: 5.1
None	No IPR available	PANTHER	PTHR11102	SEL-1-LIKE PROTEIN	coord: 2..300
None	No IPR available	PANTHER	PTHR11102:SF147	SEL1L ERAD E3 LIGASE ADAPTOR SUBUNIT	coord: 2..300
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..317
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 318..336
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 337..428
None	No IPR available	TMHMM	TMhelix		coord: 314..336

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig9724	contig	E_fasciculatus_S2_contig9724:2923..5714 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig9724.17725.1	mRNA_E_fasciculatus_S2_contig9724.17725.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig9724 2923..5714 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig9724.17725.1 ID=prot_E_fasciculatus_S2_contig9724.17725.1|Name=mRNA_E_fasciculatus_S2_contig9724.17725.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=429bp
QYQEAFVHYLIAAEQGNKEGQASLAWLLDRSIAAVPSGTSWPSSLVRRAW
DSLVRDGGGGGGGGGADSGPSGGDGTVEDEDDSGWSNEGGSGGGSGAALG
SGSRRRRRRSGVGGVADAVRQMGGDPEAMARRYRRLAAEQGDSEARCDIA
DHLYRQAKDKGAVAPGTGWLPAWARTTTTTSNNNNNADEDDKSHQQRSKT
RRERSSEGGEEGGIGAATGGYGRESEDERLARESDAAQLLSDAVAYYRLA
AEGGREEGGLGERSPSQRGLFSLGWMHQHGVGVEADPSLARELYRRSGSA
PALLGLWMMGASDLVLEVGAPLAVSAVVVAATMLAMRFRNRRRRGGSGGG
RGRRQRQPVQGVAAAAAVAGGRGRRGGGGGGGGGGGGMGGSAFLMTGEGE
GYGEREEGELVADAATAVGEEPREAREG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006597	Sel1-like