prot_E_fasciculatus_S2_contig969.17689.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig969.17689.1
Unique Nameprot_E_fasciculatus_S2_contig969.17689.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length181
Homology
BLAST of mRNA_E_fasciculatus_S2_contig969.17689.1 vs. uniprot
Match: D7FRB4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRB4_ECTSI)

HSP 1 Score: 322 bits (826), Expect = 4.620e-111
Identity = 159/180 (88.33%), Postives = 167/180 (92.78%), Query Frame = 0
Query:    1 MAYGCDLTRVFTYEGSETDIYINYVTLVLTLITLILCTRRAGERASRYPRYAAWFWVPFTSVLFAMQVFADCSTNNVGISAVWSAYAGFVFLAWWRIQHVRRPEDQGCVAEVTAVSTLTYATPASLAVWTGVCMYYAIVEEAITTVAHLVAFGVGAGALLIFEALHKISSQDSYEMMDDK 180
            MAYGCDLTRVFTYEGSETDIYINYVTLVLTLITLILCTR+AGERASRYPRYAAWFWVPFTSVLFAMQ+FADCSTNNVGISAVWSAYAGFVFLAWWRIQH+R        AE  AVS L YATP SLA+WTGVC+YYAIVEEA+TTVAHLVAFGVGAGALL+FEALHKISSQDSYEMM+DK
Sbjct:    1 MAYGCDLTRVFTYEGSETDIYINYVTLVLTLITLILCTRKAGERASRYPRYAAWFWVPFTSVLFAMQLFADCSTNNVGISAVWSAYAGFVFLAWWRIQHIR--------AENAAVSALAYATPVSLAMWTGVCVYYAIVEEAMTTVAHLVAFGVGAGALLLFEALHKISSQDSYEMMEDK 172          
BLAST of mRNA_E_fasciculatus_S2_contig969.17689.1 vs. uniprot
Match: A0A835ZC08_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC08_9STRA)

HSP 1 Score: 112 bits (281), Expect = 2.100e-28
Identity = 60/151 (39.74%), Postives = 86/151 (56.95%), Query Frame = 0
Query:    5 CDLTRVFTYEGSETDIYINYVTLVLTLITLILCTRRAGERASRYPRYAAWFWVPFTSVLFAMQVFADCSTNNVGISAVWSAYAGFVFLAWWRIQHVRRPEDQGCVAEVTAVSTLTYATPASLAVWTGVCMYYAIVEEAITTVAHLVAFGVG 155
            C ++   TY GS+ D+ +NY  LV+    + +  R A +   RY  YA   W+P T+ LF +Q+ ADC  +  GISAVW+A AGF+ + W  +  + RP                 AT A+L+   G+ +YYA+VE+AIT+VAH VAFGVG
Sbjct:    3 CKISSALTYSGSQLDVGLNYFGLVVCTTAVAVVLRPASKHCRRYRNYAQSSWIPLTAGLFVLQIGADCGADAEGISAVWAAQAGFLAVGWRLMPAMYRPRPA------------RLATAAALSTALGLTVYYAMVEDAITSVAHAVAFGVG 141          
BLAST of mRNA_E_fasciculatus_S2_contig969.17689.1 vs. uniprot
Match: A0A836CLZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLZ2_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 5.960e-20
Identity = 67/179 (37.43%), Postives = 85/179 (47.49%), Query Frame = 0
Query:    5 CDLTRVFTYE-GSETDIYINYVTLVLTLITLILCTRRAGERASRYPRYAAWFWVPFTSVLFAMQVFADCSTNN-------VGISAVWSAYAGFVFLAWWRIQHVRRPEDQGCVAEVTAVSTLTYATPASLAVWTGVCMYYAIVEEAITTVAHLVAFGVGAGALLIFEALHKISSQDSYE 175
            CD+     Y  GS  DIY NY  LVLT   L L  R AG+ A+R PR A   W+P T++L A+QVFADC+ +         GISA+W+A+AG++  A      +  P   G  A                        YYA+ E  +TTVAH+VA GVGA  LL     H       YE
Sbjct:    3 CDVPAALVYSRGSRVDIYFNYGALVLTTAALQLSLRGAGDVAARAPRCARAAWLPVTALLLALQVFADCAADEQASRRAMCGISAIWAAHAGWLATALV----ILHPLFDGAPAARAXXXXXXXXXX-------XXXXYYAVAEPPLTTVAHIVAAGVGA--LLAVAHKHIFGVAQPYE 168          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig969.17689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FRB4_ECTSI4.620e-11188.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZC08_9STRA2.100e-2839.74Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CLZ2_9STRA5.960e-2037.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 166..180
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 98..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..139
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..165
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..97
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..70
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 140..144
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
NoneNo IPR availableTMHMMTMhelixcoord: 20..38
NoneNo IPR availableTMHMMTMhelixcoord: 143..165
NoneNo IPR availableTMHMMTMhelixcoord: 51..70
NoneNo IPR availableTMHMMTMhelixcoord: 80..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig969contigE_fasciculatus_S2_contig969:12620..14296 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig969.17689.1mRNA_E_fasciculatus_S2_contig969.17689.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig969 12620..14296 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig969.17689.1 ID=prot_E_fasciculatus_S2_contig969.17689.1|Name=mRNA_E_fasciculatus_S2_contig969.17689.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=181bp
MAYGCDLTRVFTYEGSETDIYINYVTLVLTLITLILCTRRAGERASRYPR
YAAWFWVPFTSVLFAMQVFADCSTNNVGISAVWSAYAGFVFLAWWRIQHV
RRPEDQGCVAEVTAVSTLTYATPASLAVWTGVCMYYAIVEEAITTVAHLV
AFGVGAGALLIFEALHKISSQDSYEMMDDK*
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