prot_E_fasciculatus_S2_contig9671.17678.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9671.17678.1
Unique Nameprot_E_fasciculatus_S2_contig9671.17678.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length281
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig9671.17678.1 vs. uniprot
Match: D7FNJ2_ECTSI (Clathrin light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNJ2_ECTSI)

HSP 1 Score: 404 bits (1037), Expect = 6.720e-140
Identity = 255/280 (91.07%), Postives = 257/280 (91.79%), Query Frame = 0 
Query:    1 MSGEDPFFPDATGGSSGEAADPAAAASAGFVDAGSPPPVAYGMQEPAAYDLGGAAGGGGDQFGVVGDGEQFGXXXXXXXXXXXXXXXXXXXXXXXDQFEGMPLQASSTPYQPKPTDPYSLEETAGVMEAAQIQFDAGVKERAEKEAAKAAEVKRLAEEELDGFYDERTDEVARRQARSREQEETFLKGVSASIEESTSNPWARICDLVDLKKPVISAKSSFSAGAGAXXXXXXXXSRKGSATAQSGMEEEDVFRATEKMRSLIIQMKADTAEGNAGGDTG 280
            MSGEDPFFPDATGGSSGEAADP AAASAGFVDAGSPPPVAYGMQE AAYDLGG  GGGGDQFGVVGDGEQFG  XXXX   XXXXXXXXXX    D FEG+PLQASSTPYQPKPTDP SLEE AGVME AQ QFDA VKERAEKEAAKAAEVKRLAEEELDGFYD RTDEVARRQARSREQEETFLKGVSASIEESTSNPWARICDLVDLKKPVISAKSSFSAGAG XXXXXXXX RKGSATAQSGMEEE+VFRATEKMRSLIIQMKADTAE NAGGDTG
Sbjct:    1 MSGEDPFFPDATGGSSGEAADPGAAASAGFVDAGSPPPVAYGMQETAAYDLGG--GGGGDQFGVVGDGEQFGGGXXXXEGLXXXXXXXXXXG---DHFEGVPLQASSTPYQPKPTDPCSLEEAAGVMEEAQSQFDAVVKERAEKEAAKAAEVKRLAEEELDGFYDGRTDEVARRQARSREQEETFLKGVSASIEESTSNPWARICDLVDLKKPVISAKSSFSAGAGXXXXXXXXXXRKGSATAQSGMEEEEVFRATEKMRSLIIQMKADTAESNAGGDTG 275
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9671.17678.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNJ2_ECTSI6.720e-14091.07Clathrin light chain n=2 Tax=Ectocarpus TaxID=2879... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 139..159
NoneNo IPR availablePANTHERPTHR10639:SF7CLATHRIN LIGHT CHAINcoord: 103..219
IPR000996Clathrin light chainPFAMPF01086Clathrin_lg_chcoord: 135..212
e-value: 2.3E-11
score: 44.2
IPR000996Clathrin light chainPANTHERPTHR10639CLATHRIN LIGHT CHAINcoord: 103..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9671contigE_fasciculatus_S2_contig9671:1334..4725 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9671.17678.1mRNA_E_fasciculatus_S2_contig9671.17678.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9671 138..5837 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9671.17678.1 ID=prot_E_fasciculatus_S2_contig9671.17678.1|Name=mRNA_E_fasciculatus_S2_contig9671.17678.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=281bp
MSGEDPFFPDATGGSSGEAADPAAAASAGFVDAGSPPPVAYGMQEPAAYD
LGGAAGGGGDQFGVVGDGEQFGGDGEQFGGGGGGGEGGGLGGGGGDQFEG
MPLQASSTPYQPKPTDPYSLEETAGVMEAAQIQFDAGVKERAEKEAAKAA
EVKRLAEEELDGFYDERTDEVARRQARSREQEETFLKGVSASIEESTSNP
WARICDLVDLKKPVISAKSSFSAGAGASGGGGSGGSRKGSATAQSGMEEE
DVFRATEKMRSLIIQMKADTAEGNAGGDTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000996Clathrin_L-chain